| 80 |
0.002475 |
0.104 |
b2468 |
aegA |
-11.19 |
0.098238 |
223 -- 245 |
11 -- 33 |
putative oxidoreductase FeS binding subunit/NAD/FAD-binding subunit |
|
_____________222_____________________246\n_____________|_______________________|\n5'-UCU...GGCCA_____C____AUGUC________CAUGC...UGA-3'\n______________ACAGU_AGCA_____UGGGUUGU\n______________||||:_||||_____||||||:|\n______________UGUCG_UCGU_____ACCCAAUA\n3'-UUU...GACCA_____A____AAAAU________CAAAA...UCG-5'\n_____________|_______________________|\n_____________34______________________10\n |
239 -- 245 |
11 -- 17 |
-21.0997 kcal/mol |
8.44489 kcal/mol |
1.46958 kcal/mol |
222 246@LB@ | |@LB@5'-UCU...GGCCA C AUGUC CAUGC...UGA-3'@LB@ ACAGU AGCA UGGGUUGU@LB@ ||||: |||| ||||||:|@LB@ UGUCG UCGU ACCCAAUA@LB@3'-UUU...GACCA A AAAAU CAAAA...UCG-5'@LB@ | |@LB@ 34 10@LB@@LB@@LB@Energy -11.19 kcal/mol@LB@Hybridization Energy -21.0997 kcal/mol@LB@Unfolding Energy - mRNA 8.44489 kcal/mol@LB@Unfolding Energy - sRNA 1.46958 kcal/mol@LB@@LB@Position - mRNA 223 -- 245@LB@Position - sRNA 11 -- 33@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 106 |
0.003955 |
0.1254 |
b1767 |
ansA |
-7.74 |
0.383564 |
250 -- 272 |
11 -- 34 |
cytoplasmic L-asparaginase 1 |
|
_____________249______________________273\n_____________|________________________|\n5'-UGC...CGGGA______GUUCCGAGCA________AUACC...GCC-3'\n______________UGCAGC___________GGGUUAU\n______________|:||||___________|||||||\n______________AUGUCG___________CCCAAUA\n3'-UUU...GGACC______AUCGUAAAAUA_______CAAAA...UCG-5'\n_____________|________________________|\n_____________35_______________________10\n |
266 -- 272 |
11 -- 17 |
-16.5796 kcal/mol |
7.36686 kcal/mol |
1.47152 kcal/mol |
249 273@LB@ | |@LB@5'-UGC...CGGGA GUUCCGAGCA AUACC...GCC-3'@LB@ UGCAGC GGGUUAU@LB@ |:|||| |||||||@LB@ AUGUCG CCCAAUA@LB@3'-UUU...GGACC AUCGUAAAAUA CAAAA...UCG-5'@LB@ | |@LB@ 35 10@LB@@LB@@LB@Energy -7.74 kcal/mol@LB@Hybridization Energy -16.5796 kcal/mol@LB@Unfolding Energy - mRNA 7.36686 kcal/mol@LB@Unfolding Energy - sRNA 1.47152 kcal/mol@LB@@LB@Position - mRNA 250 -- 272@LB@Position - sRNA 11 -- 34@LB@Position Seed - mRNA 266 -- 272@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 194 |
0.01107 |
0.1919 |
b3288 |
fmt |
-14.89 |
0.012048 |
76 -- 114 |
11 -- 48 |
10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase |
|
_____________75_______________________________________115\n_____________|________________________________________|\n5'-AUU...AGCAU___A___AUCA___________AAACUG_______A____CUGUC...UGU-3'\n______________GAG_UGG____CCUGGU_CGGC______UUUAUGG_UUAU\n______________|||_|||____||||||_|:||______|||||||_||||\n______________CUC_ACC____GGACCA_GUCG______AAAUACC_AAUA\n3'-UUU...GAUUC___C___AA________U____AUCGUA_______C____CAAAA...UCG-5'\n_____________|________________________________________|\n_____________49_______________________________________10\n |
103 -- 109 |
16 -- 22 |
-29.2084 kcal/mol |
9.72928 kcal/mol |
4.59227 kcal/mol |
75 115@LB@ | |@LB@5'-AUU...AGCAU A AUCA AAACUG A CUGUC...UGU-3'@LB@ GAG UGG CCUGGU CGGC UUUAUGG UUAU@LB@ ||| ||| |||||| |:|| ||||||| ||||@LB@ CUC ACC GGACCA GUCG AAAUACC AAUA@LB@3'-UUU...GAUUC C AA U AUCGUA C CAAAA...UCG-5'@LB@ | |@LB@ 49 10@LB@@LB@@LB@Energy -14.89 kcal/mol@LB@Hybridization Energy -29.2084 kcal/mol@LB@Unfolding Energy - mRNA 9.72928 kcal/mol@LB@Unfolding Energy - sRNA 4.59227 kcal/mol@LB@@LB@Position - mRNA 76 -- 114@LB@Position - sRNA 11 -- 48@LB@Position Seed - mRNA 103 -- 109@LB@Position Seed - sRNA 16 -- 22@LB@ |
| 108 |
0.004185 |
0.1296 |
b2158 |
yeiH |
-13.47 |
0.029300 |
232 -- 260 |
12 -- 35 |
UPF0324 family inner membrane protein |
|
_____________231___________________________261\n_____________|_____________________________|\n5'-CAC...ACAUC_____CUG___________UCCG______GCCCU...GUG-3'\n______________GUACA___UGGCAUUUUAU____GGGUUA\n______________|||||___|:|||||||||____||||||\n______________CAUGU___AUCGUAAAAUA____CCCAAU\n3'-UUU...AGGAC_____CG______________________ACAAA...UCG-5'\n_____________|_____________________________|\n_____________36____________________________11\n |
244 -- 250 |
18 -- 24 |
-22.9966 kcal/mol |
8.07046 kcal/mol |
1.45491 kcal/mol |
231 261@LB@ | |@LB@5'-CAC...ACAUC CUG UCCG GCCCU...GUG-3'@LB@ GUACA UGGCAUUUUAU GGGUUA@LB@ ||||| |:||||||||| ||||||@LB@ CAUGU AUCGUAAAAUA CCCAAU@LB@3'-UUU...AGGAC CG ACAAA...UCG-5'@LB@ | |@LB@ 36 11@LB@@LB@@LB@Energy -13.47 kcal/mol@LB@Hybridization Energy -22.9966 kcal/mol@LB@Unfolding Energy - mRNA 8.07046 kcal/mol@LB@Unfolding Energy - sRNA 1.45491 kcal/mol@LB@@LB@Position - mRNA 232 -- 260@LB@Position - sRNA 12 -- 35@LB@Position Seed - mRNA 244 -- 250@LB@Position Seed - sRNA 18 -- 24@LB@ |
| 136 |
0.005909 |
0.146 |
b1291 |
sapD |
-11.34 |
0.091029 |
118 -- 151 |
12 -- 36 |
antimicrobial peptide ABC transporter ATPase |
|
_____________117________________________________152\n_____________|__________________________________|\n5'-AUC...UGCCA________AAUUAUGAU______G____U_____ACCUC...GUG-3'\n______________GGUGCGGC_________UAGCGU_UUGU_GGUUA\n______________|||:|:||_________||||:|_||:|_|||||\n______________CCAUGUCG_________AUCGUA_AAUA_CCAAU\n3'-UUU...AAGGA_______________________A____C_____ACAAA...UCG-5'\n_____________|__________________________________|\n_____________37_________________________________11\n |
119 -- 125 |
29 -- 35 |
-24.3443 kcal/mol |
11.5428 kcal/mol |
1.45699 kcal/mol |
117 152@LB@ | |@LB@5'-AUC...UGCCA AAUUAUGAU G U ACCUC...GUG-3'@LB@ GGUGCGGC UAGCGU UUGU GGUUA@LB@ |||:|:|| ||||:| ||:| |||||@LB@ CCAUGUCG AUCGUA AAUA CCAAU@LB@3'-UUU...AAGGA A C ACAAA...UCG-5'@LB@ | |@LB@ 37 11@LB@@LB@@LB@Energy -11.34 kcal/mol@LB@Hybridization Energy -24.3443 kcal/mol@LB@Unfolding Energy - mRNA 11.5428 kcal/mol@LB@Unfolding Energy - sRNA 1.45699 kcal/mol@LB@@LB@Position - mRNA 118 -- 151@LB@Position - sRNA 12 -- 36@LB@Position Seed - mRNA 119 -- 125@LB@Position Seed - sRNA 29 -- 35@LB@ |
| 27 |
0.0003737 |
0.04652 |
b2828 |
lgt |
-19.83 |
0.000134 |
254 -- 300 |
13 -- 50 |
phosphatidylglycerol-prolipoprotein diacylglyceryl transferase |
|
_____________253____________________________________________300\n_____________|______________________________________________|\n5'-CCU...UCAAU____CCC____CGC___A__________CUGAU____CUG_______-3'\n______________AGGA___GUGG___UUC_CUGGUACGGC_____GUAU___GUGGGUU\n______________||||___||||___|||_|||||||:||_____|:||___:||||||\n______________UCCU___CACC___AAG_GACCAUGUCG_____CGUA___UACCCAA\n3'-UUU...CCGAU____C_______________________AU_______AAA_______UACAA...UCG-5'\n_____________|_______________________________________________|\n_____________51______________________________________________12\n |
294 -- 300 |
13 -- 19 |
-39.0639 kcal/mol |
14.6059 kcal/mol |
4.62837 kcal/mol |
253 300@LB@ | |@LB@5'-CCU...UCAAU CCC CGC A CUGAU CUG -3'@LB@ AGGA GUGG UUC CUGGUACGGC GUAU GUGGGUU@LB@ |||| |||| ||| |||||||:|| |:|| :||||||@LB@ UCCU CACC AAG GACCAUGUCG CGUA UACCCAA@LB@3'-UUU...CCGAU C AU AAA UACAA...UCG-5'@LB@ | |@LB@ 51 12@LB@@LB@@LB@Energy -19.83 kcal/mol@LB@Hybridization Energy -39.0639 kcal/mol@LB@Unfolding Energy - mRNA 14.6059 kcal/mol@LB@Unfolding Energy - sRNA 4.62837 kcal/mol@LB@@LB@Position - mRNA 254 -- 300@LB@Position - sRNA 13 -- 50@LB@Position Seed - mRNA 294 -- 300@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 170 |
0.009245 |
0.1803 |
b3205 |
yhbJ |
-9.78 |
0.183109 |
251 -- 276 |
13 -- 39 |
adaptor protein for GlmZ/GlmY sRNA decay glucosamine-6-phosphate-regulated; NTPase |
|
_____________250__________________________277\n_____________|____________________________|\n5'-CGG...GUCGC____C__________AAGA_________UUUAC...CCG-3'\n______________CCUG_GUGC_GCUGG_____UAUGGGUU\n______________||||_||:|_|||:|_____||||||||\n______________GGAC_CAUG_CGAUC_____AUACCCAA\n3'-UUU...ACCAA_________U_____GUAAA________UACAA...UCG-5'\n_____________|____________________________|\n_____________40___________________________12\n |
270 -- 276 |
13 -- 19 |
-27.4258 kcal/mol |
13.0784 kcal/mol |
4.56849 kcal/mol |
250 277@LB@ | |@LB@5'-CGG...GUCGC C AAGA UUUAC...CCG-3'@LB@ CCUG GUGC GCUGG UAUGGGUU@LB@ |||| ||:| |||:| ||||||||@LB@ GGAC CAUG CGAUC AUACCCAA@LB@3'-UUU...ACCAA U GUAAA UACAA...UCG-5'@LB@ | |@LB@ 40 12@LB@@LB@@LB@Energy -9.78 kcal/mol@LB@Hybridization Energy -27.4258 kcal/mol@LB@Unfolding Energy - mRNA 13.0784 kcal/mol@LB@Unfolding Energy - sRNA 4.56849 kcal/mol@LB@@LB@Position - mRNA 251 -- 276@LB@Position - sRNA 13 -- 39@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 7 |
1.492e-05 |
0.007162 |
b0903 |
pflB |
-20.16 |
0.000088 |
81 -- 115 |
14 -- 49 |
formate C-acetyltransferase 1 anaerobic; pyruvate formate-lyase 1 |
|
_____________80____________________________________116\n_____________|_____________________________________|\n5'-CAC...UUAUC__U________GU____UG_____A___AC_______CAUUU...ACU-3'\n______________GG_GGUGGUUU__UGGU__GGUUG_CAU____UGGGU\n______________||_|||||||:__||||__:|:|:_|||____|||||\n______________CC_CCACCAAG__ACCA__UCGAU_GUA____ACCCA\n3'-UUU...CGAUU__U________G_____UG_____C___AAAU_____AUACA...UCG-5'\n_____________|_____________________________________|\n_____________50____________________________________13\n |
85 -- 91 |
39 -- 45 |
-33.3931 kcal/mol |
8.66349 kcal/mol |
4.57395 kcal/mol |
80 116@LB@ | |@LB@5'-CAC...UUAUC U GU UG A AC CAUUU...ACU-3'@LB@ GG GGUGGUUU UGGU GGUUG CAU UGGGU@LB@ || |||||||: |||| :|:|: ||| |||||@LB@ CC CCACCAAG ACCA UCGAU GUA ACCCA@LB@3'-UUU...CGAUU U G UG C AAAU AUACA...UCG-5'@LB@ | |@LB@ 50 13@LB@@LB@@LB@Energy -20.16 kcal/mol@LB@Hybridization Energy -33.3931 kcal/mol@LB@Unfolding Energy - mRNA 8.66349 kcal/mol@LB@Unfolding Energy - sRNA 4.57395 kcal/mol@LB@@LB@Position - mRNA 81 -- 115@LB@Position - sRNA 14 -- 49@LB@Position Seed - mRNA 85 -- 91@LB@Position Seed - sRNA 39 -- 45@LB@ |
| 17 |
0.0001135 |
0.02244 |
b3531 |
bcsZ |
-11.80 |
0.072553 |
125 -- 136 |
14 -- 30 |
endo-1 4-D-glucanase |
|
_____________124_______________137\n_____________|_________________|\n5'-UCA...AUAUU_________________ACUGU...AGG-3'\n______________GCUGGCA_____UGGGU\n______________|||:|||_____|||||\n______________CGAUCGU_____ACCCA\n3'-UUU...CAUGU_______AAAAU_____AUACA...UCG-5'\n_____________|_________________|\n_____________31________________13\n |
125 -- 131 |
24 -- 30 |
-17.2227 kcal/mol |
4.01076 kcal/mol |
1.40705 kcal/mol |
124 137@LB@ | |@LB@5'-UCA...AUAUU ACUGU...AGG-3'@LB@ GCUGGCA UGGGU@LB@ |||:||| |||||@LB@ CGAUCGU ACCCA@LB@3'-UUU...CAUGU AAAAU AUACA...UCG-5'@LB@ | |@LB@ 31 13@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -17.2227 kcal/mol@LB@Unfolding Energy - mRNA 4.01076 kcal/mol@LB@Unfolding Energy - sRNA 1.40705 kcal/mol@LB@@LB@Position - mRNA 125 -- 136@LB@Position - sRNA 14 -- 30@LB@Position Seed - mRNA 125 -- 131@LB@Position Seed - sRNA 24 -- 30@LB@ |
| 48 |
0.001117 |
0.07744 |
b2829 |
ptsP |
-13.12 |
0.035810 |
22 -- 37 |
14 -- 33 |
PEP-protein phosphotransferase enzyme I; GAF domain containing protein |
|
_____________21___________________38\n_____________|____________________|\n5'-CCA...GUUUG____________________AAGUU...UGG-3'\n______________ACGGCUGGCG____AUGGGU\n______________||:|||:||:____||||||\n______________UGUCGAUCGU____UACCCA\n3'-UUU...GACCA__________AAAA______AUACA...UCG-5'\n_____________|____________________|\n_____________34___________________13\n |
25 -- 31 |
24 -- 30 |
-23.1334 kcal/mol |
8.56068 kcal/mol |
1.44884 kcal/mol |
21 38@LB@ | |@LB@5'-CCA...GUUUG AAGUU...UGG-3'@LB@ ACGGCUGGCG AUGGGU@LB@ ||:|||:||: ||||||@LB@ UGUCGAUCGU UACCCA@LB@3'-UUU...GACCA AAAA AUACA...UCG-5'@LB@ | |@LB@ 34 13@LB@@LB@@LB@Energy -13.12 kcal/mol@LB@Hybridization Energy -23.1334 kcal/mol@LB@Unfolding Energy - mRNA 8.56068 kcal/mol@LB@Unfolding Energy - sRNA 1.44884 kcal/mol@LB@@LB@Position - mRNA 22 -- 37@LB@Position - sRNA 14 -- 33@LB@Position Seed - mRNA 25 -- 31@LB@Position Seed - sRNA 24 -- 30@LB@ |
