| 54 |
0.001244 |
0.07744 |
b1874 |
cutC |
-11.77 |
0.073856 |
3 -- 15 |
22 -- 35 |
copper homeostasis protein |
|
_____________2______________16\n_____________|______________|\n_________5'-CC______________GCUUU...AGG-3'\n______________GUGC_GCUGGCAUU\n______________||:|_|||:|||||\n______________CAUG_CGAUCGUAA\n3'-UUU...AGGAC____U_________AAUAC...UCG-5'\n_____________|______________|\n_____________36_____________21\n |
9 -- 15 |
22 -- 28 |
-17.4456 kcal/mol |
4.24515 kcal/mol |
1.43095 kcal/mol |
2 16@LB@ | |@LB@ 5'-CC GCUUU...AGG-3'@LB@ GUGC GCUGGCAUU@LB@ ||:| |||:|||||@LB@ CAUG CGAUCGUAA@LB@3'-UUU...AGGAC U AAUAC...UCG-5'@LB@ | |@LB@ 36 21@LB@@LB@@LB@Energy -11.77 kcal/mol@LB@Hybridization Energy -17.4456 kcal/mol@LB@Unfolding Energy - mRNA 4.24515 kcal/mol@LB@Unfolding Energy - sRNA 1.43095 kcal/mol@LB@@LB@Position - mRNA 3 -- 15@LB@Position - sRNA 22 -- 35@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 68 |
0.001845 |
0.09081 |
b2957 |
ansB |
-14.03 |
0.020893 |
243 -- 268 |
22 -- 43 |
periplasmic L-asparaginase 2 |
|
_____________242________________________269\n_____________|__________________________|\n5'-AGC...UUAUG______AG_________AU_______ACCCA...GGA-3'\n______________GGUUUU__UGGUGCAGC__UGGCAUU\n______________||||::__||||:||||__|:|||||\n______________CCAAGG__ACCAUGUCG__AUCGUAA\n3'-UUU...CUCCA__________________________AAUAC...UCG-5'\n_____________|__________________________|\n_____________44_________________________21\n |
262 -- 268 |
22 -- 28 |
-26.4763 kcal/mol |
7.8858 kcal/mol |
4.55803 kcal/mol |
242 269@LB@ | |@LB@5'-AGC...UUAUG AG AU ACCCA...GGA-3'@LB@ GGUUUU UGGUGCAGC UGGCAUU@LB@ ||||:: ||||:|||| |:|||||@LB@ CCAAGG ACCAUGUCG AUCGUAA@LB@3'-UUU...CUCCA AAUAC...UCG-5'@LB@ | |@LB@ 44 21@LB@@LB@@LB@Energy -14.03 kcal/mol@LB@Hybridization Energy -26.4763 kcal/mol@LB@Unfolding Energy - mRNA 7.8858 kcal/mol@LB@Unfolding Energy - sRNA 4.55803 kcal/mol@LB@@LB@Position - mRNA 243 -- 268@LB@Position - sRNA 22 -- 43@LB@Position Seed - mRNA 262 -- 268@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 95 |
0.003283 |
0.1162 |
b3298 |
rpsM |
-13.37 |
0.031144 |
190 -- 221 |
22 -- 50 |
30S ribosomal subunit protein S13 |
|
_____________189_________________________________222\n_____________|___________________________________|\n5'-GUC...AUAGU_____UGCAUA____C____________A______AACAU...UCC-3'\n______________AGGAG______GUGG__CC__GUAUAGC_GGCAUU\n______________|||||______||||__||__|||:|||_:|||||\n______________UCCUC______CACC__GG__CAUGUCG_UCGUAA\n3'-UUU...CCGAU_______________AA__AC_______A______AAUAC...UCG-5'\n_____________|___________________________________|\n_____________51__________________________________21\n |
208 -- 214 |
29 -- 35 |
-26.0998 kcal/mol |
8.11911 kcal/mol |
4.61397 kcal/mol |
189 222@LB@ | |@LB@5'-GUC...AUAGU UGCAUA C A AACAU...UCC-3'@LB@ AGGAG GUGG CC GUAUAGC GGCAUU@LB@ ||||| |||| || |||:||| :|||||@LB@ UCCUC CACC GG CAUGUCG UCGUAA@LB@3'-UUU...CCGAU AA AC A AAUAC...UCG-5'@LB@ | |@LB@ 51 21@LB@@LB@@LB@Energy -13.37 kcal/mol@LB@Hybridization Energy -26.0998 kcal/mol@LB@Unfolding Energy - mRNA 8.11911 kcal/mol@LB@Unfolding Energy - sRNA 4.61397 kcal/mol@LB@@LB@Position - mRNA 190 -- 221@LB@Position - sRNA 22 -- 50@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 29 -- 35@LB@ |
| 110 |
0.004262 |
0.1302 |
b1871 |
cmoB |
-11.44 |
0.086999 |
165 -- 182 |
22 -- 44 |
tRNA (cmo5U34)-carboxymethyltransferase carboxy-SAM-dependent |
|
_____________164______________________183\n_____________|________________________|\n5'-CAC...AACUU______A_________________AAAAG...AGC-3'\n______________UGGUUC_CUGG______UGGCAUU\n______________||||||_||||______|:|||||\n______________ACCAAG_GACC______AUCGUAA\n3'-UUU...CCUCC___________AUGUCG_______AAUAC...UCG-5'\n_____________|________________________|\n_____________45_______________________21\n |
176 -- 182 |
22 -- 28 |
-20.1895 kcal/mol |
4.19283 kcal/mol |
4.55859 kcal/mol |
164 183@LB@ | |@LB@5'-CAC...AACUU A AAAAG...AGC-3'@LB@ UGGUUC CUGG UGGCAUU@LB@ |||||| |||| |:|||||@LB@ ACCAAG GACC AUCGUAA@LB@3'-UUU...CCUCC AUGUCG AAUAC...UCG-5'@LB@ | |@LB@ 45 21@LB@@LB@@LB@Energy -11.44 kcal/mol@LB@Hybridization Energy -20.1895 kcal/mol@LB@Unfolding Energy - mRNA 4.19283 kcal/mol@LB@Unfolding Energy - sRNA 4.55859 kcal/mol@LB@@LB@Position - mRNA 165 -- 182@LB@Position - sRNA 22 -- 44@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 118 |
0.00496 |
0.1407 |
b1128 |
roxA |
-15.27 |
0.009267 |
80 -- 105 |
22 -- 49 |
50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase |
|
_____________79___________________________106\n_____________|____________________________|\n5'-UGG...CGGAU_______A_____________C______CUGCG...ACC-3'\n______________GGAGGUG_UUUUUGGU_C_GC_AGCAUU\n______________|||||||_||::||||_|_||_||||||\n______________CCUCCAC_AAGGACCA_G_CG_UCGUAA\n3'-UUU...CGAUU_______C________U_U__A______AAUAC...UCG-5'\n_____________|____________________________|\n_____________50___________________________21\n |
80 -- 86 |
43 -- 49 |
-30.554 kcal/mol |
10.7239 kcal/mol |
4.55979 kcal/mol |
79 106@LB@ | |@LB@5'-UGG...CGGAU A C CUGCG...ACC-3'@LB@ GGAGGUG UUUUUGGU C GC AGCAUU@LB@ ||||||| ||::|||| | || ||||||@LB@ CCUCCAC AAGGACCA G CG UCGUAA@LB@3'-UUU...CGAUU C U U A AAUAC...UCG-5'@LB@ | |@LB@ 50 21@LB@@LB@@LB@Energy -15.27 kcal/mol@LB@Hybridization Energy -30.554 kcal/mol@LB@Unfolding Energy - mRNA 10.7239 kcal/mol@LB@Unfolding Energy - sRNA 4.55979 kcal/mol@LB@@LB@Position - mRNA 80 -- 105@LB@Position - sRNA 22 -- 49@LB@Position Seed - mRNA 80 -- 86@LB@Position Seed - sRNA 43 -- 49@LB@ |
| 162 |
0.008285 |
0.1719 |
b3671 |
ilvB |
-15.19 |
0.009769 |
264 -- 284 |
22 -- 41 |
acetolactate synthase 2 large subunit |
|
_____________263___________________285\n_____________|_____________________|\n5'-CUA...UUCAU_______A_____AG______AAGAU...GCA-3'\n______________UUCCUGG_ACAGC__GGCAUU\n______________|||||||_|||||__:|||||\n______________AAGGACC_UGUCG__UCGUAA\n3'-UUU...CCACC_______A_____A_______AAUAC...UCG-5'\n_____________|_____________________|\n_____________42____________________21\n |
264 -- 270 |
35 -- 41 |
-26.898 kcal/mol |
7.14717 kcal/mol |
4.5564 kcal/mol |
263 285@LB@ | |@LB@5'-CUA...UUCAU A AG AAGAU...GCA-3'@LB@ UUCCUGG ACAGC GGCAUU@LB@ ||||||| ||||| :|||||@LB@ AAGGACC UGUCG UCGUAA@LB@3'-UUU...CCACC A A AAUAC...UCG-5'@LB@ | |@LB@ 42 21@LB@@LB@@LB@Energy -15.19 kcal/mol@LB@Hybridization Energy -26.898 kcal/mol@LB@Unfolding Energy - mRNA 7.14717 kcal/mol@LB@Unfolding Energy - sRNA 4.5564 kcal/mol@LB@@LB@Position - mRNA 264 -- 284@LB@Position - sRNA 22 -- 41@LB@Position Seed - mRNA 264 -- 270@LB@Position Seed - sRNA 35 -- 41@LB@ |
| 29 |
0.0004753 |
0.05348 |
b3412 |
bioH |
-14.38 |
0.016792 |
146 -- 163 |
23 -- 40 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________145________________164\n_____________|__________________|\n5'-GGC...CAUAA___C_____U________AUGUU...ACG-3'\n______________UCC_GGUAC_GUUAGCAU\n______________|||_|||||_|:||||||\n______________AGG_CCAUG_CGAUCGUA\n3'-UUU...CACCA___A_____U________AAAUA...UCG-5'\n_____________|__________________|\n_____________41_________________22\n |
157 -- 163 |
23 -- 29 |
-23.5076 kcal/mol |
4.57199 kcal/mol |
4.55554 kcal/mol |
145 164@LB@ | |@LB@5'-GGC...CAUAA C U AUGUU...ACG-3'@LB@ UCC GGUAC GUUAGCAU@LB@ ||| ||||| |:||||||@LB@ AGG CCAUG CGAUCGUA@LB@3'-UUU...CACCA A U AAAUA...UCG-5'@LB@ | |@LB@ 41 22@LB@@LB@@LB@Energy -14.38 kcal/mol@LB@Hybridization Energy -23.5076 kcal/mol@LB@Unfolding Energy - mRNA 4.57199 kcal/mol@LB@Unfolding Energy - sRNA 4.55554 kcal/mol@LB@@LB@Position - mRNA 146 -- 163@LB@Position - sRNA 23 -- 40@LB@Position Seed - mRNA 157 -- 163@LB@Position Seed - sRNA 23 -- 29@LB@ |
| 148 |
0.00721 |
0.1633 |
b0643 |
ybeL |
-14.84 |
0.012433 |
12 -- 39 |
23 -- 48 |
DUF1451 family protein |
|
_____________11___________________________40\n_____________|____________________________|\n5'-AAU...GCGUU____________CAGAU_C__A______AGCCC...CGC-3'\n______________GAGGUGGUUUUU_____C_GC_UAGCAU\n______________|||||||||::|_____|_||_||||||\n______________CUCCACCAAGGA_____G_CG_AUCGUA\n3'-UUU...GAUUC____________CCAU__U_________AAAUA...UCG-5'\n_____________|____________________________|\n_____________49___________________________22\n |
17 -- 23 |
37 -- 43 |
-25.8201 kcal/mol |
6.42089 kcal/mol |
4.55935 kcal/mol |
11 40@LB@ | |@LB@5'-AAU...GCGUU CAGAU C A AGCCC...CGC-3'@LB@ GAGGUGGUUUUU C GC UAGCAU@LB@ |||||||||::| | || ||||||@LB@ CUCCACCAAGGA G CG AUCGUA@LB@3'-UUU...GAUUC CCAU U AAAUA...UCG-5'@LB@ | |@LB@ 49 22@LB@@LB@@LB@Energy -14.84 kcal/mol@LB@Hybridization Energy -25.8201 kcal/mol@LB@Unfolding Energy - mRNA 6.42089 kcal/mol@LB@Unfolding Energy - sRNA 4.55935 kcal/mol@LB@@LB@Position - mRNA 12 -- 39@LB@Position - sRNA 23 -- 48@LB@Position Seed - mRNA 17 -- 23@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 160 |
0.008086 |
0.1694 |
b3350 |
kefB |
-10.41 |
0.139805 |
251 -- 273 |
23 -- 46 |
potassium:proton antiporter |
|
_____________250______________________274\n_____________|________________________|\n5'-UAC...GCGGC_____C_G_______C________CGCGG...UGG-3'\n______________GGUGG_U_C_GGUGC_GCUGGCAU\n______________|||||_|_|_|||:|_|||:||||\n______________CCACC_A_G_CCAUG_CGAUCGUA\n3'-UUU...UUCCU_____A_G_A_____U________AAAUA...UCG-5'\n_____________|________________________|\n_____________47_______________________22\n |
267 -- 273 |
23 -- 29 |
-29.1074 kcal/mol |
14.1356 kcal/mol |
4.5585 kcal/mol |
250 274@LB@ | |@LB@5'-UAC...GCGGC C G C CGCGG...UGG-3'@LB@ GGUGG U C GGUGC GCUGGCAU@LB@ ||||| | | |||:| |||:||||@LB@ CCACC A G CCAUG CGAUCGUA@LB@3'-UUU...UUCCU A G A U AAAUA...UCG-5'@LB@ | |@LB@ 47 22@LB@@LB@@LB@Energy -10.41 kcal/mol@LB@Hybridization Energy -29.1074 kcal/mol@LB@Unfolding Energy - mRNA 14.1356 kcal/mol@LB@Unfolding Energy - sRNA 4.5585 kcal/mol@LB@@LB@Position - mRNA 251 -- 273@LB@Position - sRNA 23 -- 46@LB@Position Seed - mRNA 267 -- 273@LB@Position Seed - sRNA 23 -- 29@LB@ |
| 172 |
0.009254 |
0.1803 |
b1676 |
pykF |
-8.82 |
0.265733 |
268 -- 283 |
23 -- 40 |
pyruvate kinase I |
|
_____________267________________284\n_____________|__________________|\n5'-GGA...UAAAA_G________________GAACG...UGA-3'\n______________U_CUGG_AC_GCUGGCAU\n______________|_||||_||_|||:||||\n______________A_GACC_UG_CGAUCGUA\n3'-UUU...CACCA_G____A__U________AAAUA...UCG-5'\n_____________|__________________|\n_____________41_________________22\n |
277 -- 283 |
23 -- 29 |
-20.12 kcal/mol |
6.74388 kcal/mol |
4.55554 kcal/mol |
267 284@LB@ | |@LB@5'-GGA...UAAAA G GAACG...UGA-3'@LB@ U CUGG AC GCUGGCAU@LB@ | |||| || |||:||||@LB@ A GACC UG CGAUCGUA@LB@3'-UUU...CACCA G A U AAAUA...UCG-5'@LB@ | |@LB@ 41 22@LB@@LB@@LB@Energy -8.82 kcal/mol@LB@Hybridization Energy -20.12 kcal/mol@LB@Unfolding Energy - mRNA 6.74388 kcal/mol@LB@Unfolding Energy - sRNA 4.55554 kcal/mol@LB@@LB@Position - mRNA 268 -- 283@LB@Position - sRNA 23 -- 40@LB@Position Seed - mRNA 277 -- 283@LB@Position Seed - sRNA 23 -- 29@LB@ |
