| 199 |
0.02505 |
0.4226 |
b3794 |
wecG |
-14.56 |
0.032964 |
62 -- 86 |
1 -- 25 |
UDP-N-acetyl-D-mannosaminuronic acid transferase |
|
_____________61_________________________87\n_____________|__________________________|\n5'-UUC...GUUUG____A____U__________U_____GGUCU...ACG-3'\n______________UCUC_CGCG__GGUCUUUUU_AUCGU\n______________||||_||||__||||||::|_||||:\n______________AGAG_GCGC__CCAGAAGGA_UAGCG\n3'-UUU...GUCCA_________UC_________C_____-5'\n_____________|_________________________|\n_____________26________________________1\n |
74 -- 80 |
7 -- 13 |
-28.4933 kcal/mol |
6.21356 kcal/mol |
7.71912 kcal/mol |
61 87@LB@ | |@LB@5'-UUC...GUUUG A U U GGUCU...ACG-3'@LB@ UCUC CGCG GGUCUUUUU AUCGU@LB@ |||| |||| ||||||::| ||||:@LB@ AGAG GCGC CCAGAAGGA UAGCG@LB@3'-UUU...GUCCA UC C -5'@LB@ | |@LB@ 26 1@LB@@LB@@LB@Energy -14.56 kcal/mol@LB@Hybridization Energy -28.4933 kcal/mol@LB@Unfolding Energy - mRNA 6.21356 kcal/mol@LB@Unfolding Energy - sRNA 7.71912 kcal/mol@LB@@LB@Position - mRNA 62 -- 86@LB@Position - sRNA 1 -- 25@LB@Position Seed - mRNA 74 -- 80@LB@Position Seed - sRNA 7 -- 13@LB@ |
| 14 |
0.0009144 |
0.2195 |
b0181 |
lpxA |
-19.56 |
0.004514 |
124 -- 202 |
1 -- 90 |
UDP-N-acetylglucosamine acetyltransferase |
|
_____________123_____________________________________________________________________________________________203\n_____________|_______________________________________________________________________________________________|\n5'-CGG...UUUUA_____G_U_________CGA____A___________C_______C_________________CG___________G_______________A___GAUUG...GAC-3'\n______________AAGGG_U_GC_UCUGGU___UGGU_AAGUAGU_UUG_GAAGCAA___GA_UGAUGU_GUGCU__UAG_____CCG_GAGG_____CCUGAU_CGU\n______________||::|_:_||_:|:||:___|||:_|||||:|_:||_|||||||___||_::||||_|||||__:||_____|||_||||_____||||||_||:\n______________UUUUC_G_CG_GGGCCG___ACCG_UUCAUUA_GAC_CUUCGUU___CU_GUUACA_CACGA__GUC_____GGC_CUCC_____GGACUA_GCG\n___________3'-_____G_U__U_____________A_______U___________ACA__C______G_____AA___CAAGA___G____CAGAA__________-5'\n______________|_____________________________________________________________________________________________|\n______________90____________________________________________________________________________________________1\n |
159 -- 165 |
51 -- 57 |
-68.8911 kcal/mol |
23.6052 kcal/mol |
25.7298 kcal/mol |
123 203@LB@ | |@LB@5'-CGG...UUUUA G U CGA A C C CG G A GAUUG...GAC-3'@LB@ AAGGG U GC UCUGGU UGGU AAGUAGU UUG GAAGCAA GA UGAUGU GUGCU UAG CCG GAGG CCUGAU CGU@LB@ ||::| : || :|:||: |||: |||||:| :|| ||||||| || ::|||| ||||| :|| ||| |||| |||||| ||:@LB@ UUUUC G CG GGGCCG ACCG UUCAUUA GAC CUUCGUU CU GUUACA CACGA GUC GGC CUCC GGACUA GCG@LB@ 3'- G U U A U ACA C G AA CAAGA G CAGAA -5'@LB@ | |@LB@ 90 1@LB@@LB@@LB@Energy -19.56 kcal/mol@LB@Hybridization Energy -68.8911 kcal/mol@LB@Unfolding Energy - mRNA 23.6052 kcal/mol@LB@Unfolding Energy - sRNA 25.7298 kcal/mol@LB@@LB@Position - mRNA 124 -- 202@LB@Position - sRNA 1 -- 90@LB@Position Seed - mRNA 159 -- 165@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 53 |
0.004949 |
0.2905 |
b3353 |
yheT |
-17.66 |
0.009631 |
104 -- 164 |
43 -- 88 |
UPF0017 family putative hydrolase |
|
_____________103____________________________________________________________165\n_____________|______________________________________________________________|\n5'-GAG...ACAGC__________CAAAU____C____AA_____CGAAAUGGCAUG_________CCAG______GCUUG...UGC-3'\n______________AAGCCAGCGC_____CCGG_CUGG__GAGUG____________GCUGGAAGC_____GAGCA\n______________||||||||:|_____||||_||||__:|||:____________:||||||||_____|||||\n______________UUCGGUCGUG_____GGCC_GACC__UUCAU____________UGACCUUCG_____CUCGU\n_________3'-UU________________________GA_____UA___________________UUACA_____UACAG...GCG-5'\n_____________|______________________________________________________________|\n_____________89_____________________________________________________________42\n |
149 -- 155 |
53 -- 59 |
-55.8349 kcal/mol |
23.2651 kcal/mol |
14.9102 kcal/mol |
103 165@LB@ | |@LB@5'-GAG...ACAGC CAAAU C AA CGAAAUGGCAUG CCAG GCUUG...UGC-3'@LB@ AAGCCAGCGC CCGG CUGG GAGUG GCUGGAAGC GAGCA@LB@ ||||||||:| |||| |||| :|||: :|||||||| |||||@LB@ UUCGGUCGUG GGCC GACC UUCAU UGACCUUCG CUCGU@LB@ 3'-UU GA UA UUACA UACAG...GCG-5'@LB@ | |@LB@ 89 42@LB@@LB@@LB@Energy -17.66 kcal/mol@LB@Hybridization Energy -55.8349 kcal/mol@LB@Unfolding Energy - mRNA 23.2651 kcal/mol@LB@Unfolding Energy - sRNA 14.9102 kcal/mol@LB@@LB@Position - mRNA 104 -- 164@LB@Position - sRNA 43 -- 88@LB@Position Seed - mRNA 149 -- 155@LB@Position Seed - sRNA 53 -- 59@LB@ |
| 41 |
0.003449 |
0.2776 |
b1908 |
yecA |
-17.18 |
0.011646 |
29 -- 47 |
36 -- 56 |
UPF0149 family protein |
|
_____________28____________________48\n_____________|_____________________|\n5'-UAC...AAUCA_______A_____________GAAAC...UGG-3'\n______________AAGCAAU___AGCAGUGUCGU\n______________|||||||___||||:||||||\n______________UUCGUUA___UCGUUACAGCA\n3'-UUU...UGACC_______CAC___________CGAAA...GCG-5'\n_____________|_____________________|\n_____________57____________________35\n |
41 -- 47 |
36 -- 42 |
-23.2486 kcal/mol |
2.84047 kcal/mol |
3.225 kcal/mol |
28 48@LB@ | |@LB@5'-UAC...AAUCA A GAAAC...UGG-3'@LB@ AAGCAAU AGCAGUGUCGU@LB@ ||||||| ||||:||||||@LB@ UUCGUUA UCGUUACAGCA@LB@3'-UUU...UGACC CAC CGAAA...GCG-5'@LB@ | |@LB@ 57 35@LB@@LB@@LB@Energy -17.18 kcal/mol@LB@Hybridization Energy -23.2486 kcal/mol@LB@Unfolding Energy - mRNA 2.84047 kcal/mol@LB@Unfolding Energy - sRNA 3.225 kcal/mol@LB@@LB@Position - mRNA 29 -- 47@LB@Position - sRNA 36 -- 56@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 36 -- 42@LB@ |
| 26 |
0.002118 |
0.2692 |
b1181 |
ycgN |
-20.05 |
0.003709 |
218 -- 269 |
37 -- 88 |
UPF0153 family cysteine cluster protein |
|
_____________217_____________________________________________________270\n_____________|_______________________________________________________|\n5'-UUU...CUGAU____G_U______UU_____A______AACC__________AA____________GAAUG...GUC-3'\n______________GAGC_A_GUACCU__CUGGC_AAGUAA____CUGGA__CGA__UGAGCGAUG_CG\n______________:|||_|_|:|||:__|||||_||||||____|||||__|:|__|||||:|||_||\n______________UUCG_U_CGUGGG__GACCG_UUCAUU____GACCU__GUU__ACUCGUUAC_GC\n_________3'-UU____G________CC_____A______AU_______UC___AC_________A__ACGAA...GCG-5'\n_____________|_______________________________________________________|\n_____________89______________________________________________________36\n |
261 -- 267 |
40 -- 46 |
-50.5987 kcal/mol |
15.641 kcal/mol |
14.9108 kcal/mol |
217 270@LB@ | |@LB@5'-UUU...CUGAU G U UU A AACC AA GAAUG...GUC-3'@LB@ GAGC A GUACCU CUGGC AAGUAA CUGGA CGA UGAGCGAUG CG@LB@ :||| | |:|||: ||||| |||||| ||||| |:| |||||:||| ||@LB@ UUCG U CGUGGG GACCG UUCAUU GACCU GUU ACUCGUUAC GC@LB@ 3'-UU G CC A AU UC AC A ACGAA...GCG-5'@LB@ | |@LB@ 89 36@LB@@LB@@LB@Energy -20.05 kcal/mol@LB@Hybridization Energy -50.5987 kcal/mol@LB@Unfolding Energy - mRNA 15.641 kcal/mol@LB@Unfolding Energy - sRNA 14.9108 kcal/mol@LB@@LB@Position - mRNA 218 -- 269@LB@Position - sRNA 37 -- 88@LB@Position Seed - mRNA 261 -- 267@LB@Position Seed - sRNA 40 -- 46@LB@ |
| 141 |
0.01639 |
0.3906 |
b1585 |
ynfC |
-13.03 |
0.059974 |
17 -- 62 |
43 -- 84 |
UPF0257 family lipoprotein |
|
_____________16______________________________________________63\n_____________|_______________________________________________|\n5'-GCU...GCUCA___G_U______GC_________CC__GG_U_______GG_C_____GAAGC...UCU-3'\n______________CAG_A_CCCGGC__GGC_GAGUA__GC__G_GAGGCGA__G_GAGCA\n______________|||_|_||||||__|||_:||||__:|__|_||:||:|__|_|||||\n______________GUC_U_GGGCCG__CCG_UUCAU__UG__C_CUUCGUU__C_CUCGU\n_____3'-UUUUCG___G________A____A_____UA__A__________A__A_____UACAG...GCG-5'\n_____________|_______________________________________________|\n_____________85______________________________________________42\n |
47 -- 53 |
51 -- 57 |
-45.3683 kcal/mol |
17.4395 kcal/mol |
14.8963 kcal/mol |
16 63@LB@ | |@LB@5'-GCU...GCUCA G U GC CC GG U GG C GAAGC...UCU-3'@LB@ CAG A CCCGGC GGC GAGUA GC G GAGGCGA G GAGCA@LB@ ||| | |||||| ||| :|||| :| | ||:||:| | |||||@LB@ GUC U GGGCCG CCG UUCAU UG C CUUCGUU C CUCGU@LB@ 3'-UUUUCG G A A UA A A A UACAG...GCG-5'@LB@ | |@LB@ 85 42@LB@@LB@@LB@Energy -13.03 kcal/mol@LB@Hybridization Energy -45.3683 kcal/mol@LB@Unfolding Energy - mRNA 17.4395 kcal/mol@LB@Unfolding Energy - sRNA 14.8963 kcal/mol@LB@@LB@Position - mRNA 17 -- 62@LB@Position - sRNA 43 -- 84@LB@Position Seed - mRNA 47 -- 53@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 162 |
0.02022 |
0.4072 |
b3354 |
yheU |
-12.65 |
0.069641 |
153 -- 196 |
51 -- 89 |
UPF0270 family protein |
|
_____________152__________________________________________197\n_____________|____________________________________________|\n5'-CUG...UGGCU_______C___UU____A________CAAC___U__________AAUCA...GUA-3'\n______________GGAGUCA_GCA__CCUG_CUGGUUAA____GUA_CUGGAGGCGA\n______________::||:||_|||__||:|_||||:|||____:||_|||||:||:|\n______________UUUCGGU_CGU__GGGC_GACCGAUU____UAU_GACCUUCGUU\n__________3'-U_________________C________CAU_______________ACACU...GCG-5'\n_____________|____________________________________________|\n_____________90___________________________________________50\n |
189 -- 195 |
52 -- 58 |
-41.3188 kcal/mol |
14.1702 kcal/mol |
14.5017 kcal/mol |
152 197@LB@ | |@LB@5'-CUG...UGGCU C UU A CAAC U AAUCA...GUA-3'@LB@ GGAGUCA GCA CCUG CUGGUUAA GUA CUGGAGGCGA@LB@ ::||:|| ||| ||:| ||||:||| :|| |||||:||:|@LB@ UUUCGGU CGU GGGC GACCGAUU UAU GACCUUCGUU@LB@ 3'-U C CAU ACACU...GCG-5'@LB@ | |@LB@ 90 50@LB@@LB@@LB@Energy -12.65 kcal/mol@LB@Hybridization Energy -41.3188 kcal/mol@LB@Unfolding Energy - mRNA 14.1702 kcal/mol@LB@Unfolding Energy - sRNA 14.5017 kcal/mol@LB@@LB@Position - mRNA 153 -- 196@LB@Position - sRNA 51 -- 89@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 50 |
0.004678 |
0.2905 |
b0906 |
ycaP |
-14.80 |
0.029952 |
1 -- 24 |
40 -- 67 |
UPF0702 family putative inner membrane protein |
|
______________1____________________________25\n______________|____________________________|\n___________5'-___UUU_______________________GAAUC...UCU-3'\n______________AGU___UGCUGGAAGC_____GAGCGAUG\n______________|||___|:||||||||_____||||:|||\n______________UCA___AUGACCUUCG_____CUCGUUAC\n3'-UUU...CCGAU___UU___________UUACA________AGCAC...GCG-5'\n_____________|_____________________________|\n_____________68____________________________39\n |
18 -- 24 |
40 -- 46 |
-27.5061 kcal/mol |
9.39751 kcal/mol |
3.30504 kcal/mol |
1 25@LB@ | |@LB@ 5'- UUU GAAUC...UCU-3'@LB@ AGU UGCUGGAAGC GAGCGAUG@LB@ ||| |:|||||||| ||||:|||@LB@ UCA AUGACCUUCG CUCGUUAC@LB@3'-UUU...CCGAU UU UUACA AGCAC...GCG-5'@LB@ | |@LB@ 68 39@LB@@LB@@LB@Energy -14.80 kcal/mol@LB@Hybridization Energy -27.5061 kcal/mol@LB@Unfolding Energy - mRNA 9.39751 kcal/mol@LB@Unfolding Energy - sRNA 3.30504 kcal/mol@LB@@LB@Position - mRNA 1 -- 24@LB@Position - sRNA 40 -- 67@LB@Position Seed - mRNA 18 -- 24@LB@Position Seed - sRNA 40 -- 46@LB@ |
| 126 |
0.01361 |
0.3627 |
b2135 |
yohC |
-14.18 |
0.038247 |
192 -- 212 |
38 -- 58 |
Yip1 family inner membrane protein |
|
_____________191___________________213\n_____________|_____________________|\n5'-CAU...AACAA_________A_____C_____UGGGG...UUU-3'\n______________GGGGGCGGU_UGAGC_AUGUC\n______________||::||::|_|||||_|||||\n______________CCUUCGUUA_ACUCG_UACAG\n3'-UUU...UAUGA_________C_____U_____CACGA...GCG-5'\n_____________|_____________________|\n_____________59____________________37\n |
192 -- 198 |
52 -- 58 |
-26.6444 kcal/mol |
9.24504 kcal/mol |
3.21639 kcal/mol |
191 213@LB@ | |@LB@5'-CAU...AACAA A C UGGGG...UUU-3'@LB@ GGGGGCGGU UGAGC AUGUC@LB@ ||::||::| ||||| |||||@LB@ CCUUCGUUA ACUCG UACAG@LB@3'-UUU...UAUGA C U CACGA...GCG-5'@LB@ | |@LB@ 59 37@LB@@LB@@LB@Energy -14.18 kcal/mol@LB@Hybridization Energy -26.6444 kcal/mol@LB@Unfolding Energy - mRNA 9.24504 kcal/mol@LB@Unfolding Energy - sRNA 3.21639 kcal/mol@LB@@LB@Position - mRNA 192 -- 212@LB@Position - sRNA 38 -- 58@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 119 |
0.01272 |
0.3585 |
b4336 |
yjiN |
-16.20 |
0.017192 |
123 -- 159 |
40 -- 86 |
zinc-type alcohol dehydrogenase-like protein |
|
_____________122_____________________________________________160\n_____________|_______________________________________________|\n5'-GGU...CGUGC_________A___A___C___C____G____________________AUUUU...CCA-3'\n______________GCCAGCAUC_GGC__GC_GAG___UA_UGGAG_______GAGCAGUG\n______________|||||||:|_|||__||_:||___||_||||:_______|||||:||\n______________CGGUCGUGG_CCG__CG_UUC___AU_ACCUU_______CUCGUUAC\n_______3'-UUUU_________G___AC__A___AUU__G_____CGUUACA________AGCAC...GCG-5'\n_____________|_______________________________________________|\n_____________87______________________________________________39\n |
153 -- 159 |
40 -- 46 |
-42.8122 kcal/mol |
11.6972 kcal/mol |
14.9104 kcal/mol |
122 160@LB@ | |@LB@5'-GGU...CGUGC A A C C G AUUUU...CCA-3'@LB@ GCCAGCAUC GGC GC GAG UA UGGAG GAGCAGUG@LB@ |||||||:| ||| || :|| || ||||: |||||:||@LB@ CGGUCGUGG CCG CG UUC AU ACCUU CUCGUUAC@LB@ 3'-UUUU G AC A AUU G CGUUACA AGCAC...GCG-5'@LB@ | |@LB@ 87 39@LB@@LB@@LB@Energy -16.20 kcal/mol@LB@Hybridization Energy -42.8122 kcal/mol@LB@Unfolding Energy - mRNA 11.6972 kcal/mol@LB@Unfolding Energy - sRNA 14.9104 kcal/mol@LB@@LB@Position - mRNA 123 -- 159@LB@Position - sRNA 40 -- 86@LB@Position Seed - mRNA 153 -- 159@LB@Position Seed - sRNA 40 -- 46@LB@ |
