| 150 |
0.01825 |
0.4072 |
b3255 |
accB |
-12.43 |
0.075652 |
231 -- 278 |
1 -- 47 |
acetyl CoA carboxylase BCCP subunit |
|
_____________230_______________________________________________279\n_____________|_________________________________________________|\n5'-UUU...UGAUC____UG_____AAGAA_____CA______AACU__AAA_______AG__GAAGA...GCC-3'\n______________GAGC___GUUG_____UCAGG__UCUCCG____GG___UUUCUGA__GC\n______________||||___||:|_____|||||__||||||____||___||:||||__||\n______________CUCG___CAGC_____AGUCC__AGAGGC____CC___AAGGACU__CG\n3'-UUU...UUACA____UUA____ACGAA_____A_______GCU___CAG_______AG__-5'\n_____________|________________________________________________|\n_____________48_______________________________________________1\n |
268 -- 274 |
5 -- 11 |
-38.2829 kcal/mol |
12.4901 kcal/mol |
13.3604 kcal/mol |
230 279@LB@ | |@LB@5'-UUU...UGAUC UG AAGAA CA AACU AAA AG GAAGA...GCC-3'@LB@ GAGC GUUG UCAGG UCUCCG GG UUUCUGA GC@LB@ |||| ||:| ||||| |||||| || ||:|||| ||@LB@ CUCG CAGC AGUCC AGAGGC CC AAGGACU CG@LB@3'-UUU...UUACA UUA ACGAA A GCU CAG AG -5'@LB@ | |@LB@ 48 1@LB@@LB@@LB@Energy -12.43 kcal/mol@LB@Hybridization Energy -38.2829 kcal/mol@LB@Unfolding Energy - mRNA 12.4901 kcal/mol@LB@Unfolding Energy - sRNA 13.3604 kcal/mol@LB@@LB@Position - mRNA 231 -- 278@LB@Position - sRNA 1 -- 47@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 5 -- 11@LB@ |
| 27 |
0.002163 |
0.2692 |
b2563 |
acpS |
-16.12 |
0.017802 |
179 -- 203 |
40 -- 65 |
holo-[acyl-carrier-protein] synthase 1 |
|
_____________178_________________________204\n_____________|___________________________|\n5'-GCC...GCGUC______________C_______U____GCAAU...GCG-3'\n______________UGAUGCUGGAAGCG__GUG_GC_AAUG\n______________|:||:||||||||:__|||_||_||||\n______________AUUAUGACCUUCGU__CAC_CG_UUAC\n3'-UUU...GAUUC______________UA___U_______AGCAC...GCG-5'\n_____________|___________________________|\n_____________66__________________________39\n |
186 -- 192 |
52 -- 58 |
-28.0575 kcal/mol |
8.63593 kcal/mol |
3.30476 kcal/mol |
178 204@LB@ | |@LB@5'-GCC...GCGUC C U GCAAU...GCG-3'@LB@ UGAUGCUGGAAGCG GUG GC AAUG@LB@ |:||:||||||||: ||| || ||||@LB@ AUUAUGACCUUCGU CAC CG UUAC@LB@3'-UUU...GAUUC UA U AGCAC...GCG-5'@LB@ | |@LB@ 66 39@LB@@LB@@LB@Energy -16.12 kcal/mol@LB@Hybridization Energy -28.0575 kcal/mol@LB@Unfolding Energy - mRNA 8.63593 kcal/mol@LB@Unfolding Energy - sRNA 3.30476 kcal/mol@LB@@LB@Position - mRNA 179 -- 203@LB@Position - sRNA 40 -- 65@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 183 |
0.02251 |
0.4113 |
b4067 |
actP |
-16.98 |
0.012652 |
22 -- 44 |
66 -- 86 |
acetate transporter |
|
_____________21______________________45\n_____________|_______________________|\n5'-AUC...UGAUC___UUC_________________CACGC...GGC-3'\n______________GCC___GCGCCCGGCUGGCUGGG\n______________|||___||:|||||||||||::|\n______________CGG___CGUGGGCCGACCGAUUC\n_______3'-UUUU___U___________________AUUAU...GCG-5'\n_____________|_______________________|\n_____________87______________________65\n |
38 -- 44 |
66 -- 72 |
-41.8503 kcal/mol |
13.121 kcal/mol |
11.7541 kcal/mol |
21 45@LB@ | |@LB@5'-AUC...UGAUC UUC CACGC...GGC-3'@LB@ GCC GCGCCCGGCUGGCUGGG@LB@ ||| ||:|||||||||||::|@LB@ CGG CGUGGGCCGACCGAUUC@LB@ 3'-UUUU U AUUAU...GCG-5'@LB@ | |@LB@ 87 65@LB@@LB@@LB@Energy -16.98 kcal/mol@LB@Hybridization Energy -41.8503 kcal/mol@LB@Unfolding Energy - mRNA 13.121 kcal/mol@LB@Unfolding Energy - sRNA 11.7541 kcal/mol@LB@@LB@Position - mRNA 22 -- 44@LB@Position - sRNA 66 -- 86@LB@Position Seed - mRNA 38 -- 44@LB@Position Seed - sRNA 66 -- 72@LB@ |
| 96 |
0.01001 |
0.3393 |
b2714 |
ascG |
-11.75 |
0.098239 |
209 -- 220 |
53 -- 64 |
asc operon transcriptional repressor; prpBC operon repressor |
|
_____________208__________221\n_____________|____________|\n5'-AAA...ACGAC____________GGCGA...AAG-3'\n______________GAUGCUGGAAGU\n______________:||:|||||||:\n______________UUAUGACCUUCG\n3'-UUU...AUUCA____________UUACA...GCG-5'\n_____________|____________|\n_____________65___________52\n |
214 -- 220 |
53 -- 59 |
-16.9486 kcal/mol |
2.31342 kcal/mol |
2.88502 kcal/mol |
208 221@LB@ | |@LB@5'-AAA...ACGAC GGCGA...AAG-3'@LB@ GAUGCUGGAAGU@LB@ :||:|||||||:@LB@ UUAUGACCUUCG@LB@3'-UUU...AUUCA UUACA...GCG-5'@LB@ | |@LB@ 65 52@LB@@LB@@LB@Energy -11.75 kcal/mol@LB@Hybridization Energy -16.9486 kcal/mol@LB@Unfolding Energy - mRNA 2.31342 kcal/mol@LB@Unfolding Energy - sRNA 2.88502 kcal/mol@LB@@LB@Position - mRNA 209 -- 220@LB@Position - sRNA 53 -- 64@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 53 -- 59@LB@ |
| 37 |
0.003144 |
0.2776 |
b3743 |
asnC |
-18.99 |
0.005660 |
240 -- 261 |
40 -- 60 |
transcriptional activator of asnA; autorepressor |
|
_____________239____________________262\n_____________|______________________|\n5'-AUU...GCAUC_________UUAA_________CGCGC...GCG-3'\n______________CUGGAAGCA____UGGGCAAUG\n______________|||||||||____||:||||||\n______________GACCUUCGU____ACUCGUUAC\n3'-UUU...AUUAU_________UAC__________AGCAC...GCG-5'\n_____________|______________________|\n_____________61_____________________39\n |
255 -- 261 |
40 -- 46 |
-27.3577 kcal/mol |
5.06736 kcal/mol |
3.29985 kcal/mol |
239 262@LB@ | |@LB@5'-AUU...GCAUC UUAA CGCGC...GCG-3'@LB@ CUGGAAGCA UGGGCAAUG@LB@ ||||||||| ||:||||||@LB@ GACCUUCGU ACUCGUUAC@LB@3'-UUU...AUUAU UAC AGCAC...GCG-5'@LB@ | |@LB@ 61 39@LB@@LB@@LB@Energy -18.99 kcal/mol@LB@Hybridization Energy -27.3577 kcal/mol@LB@Unfolding Energy - mRNA 5.06736 kcal/mol@LB@Unfolding Energy - sRNA 3.29985 kcal/mol@LB@@LB@Position - mRNA 240 -- 261@LB@Position - sRNA 40 -- 60@LB@Position Seed - mRNA 255 -- 261@LB@Position Seed - sRNA 40 -- 46@LB@ |
| 171 |
0.02102 |
0.4072 |
b1747 |
astA |
-10.86 |
0.137376 |
74 -- 103 |
34 -- 65 |
arginine succinyltransferase |
|
_____________73_______________________________104\n_____________|________________________________|\n5'-GGC...CGUGA________AUU_____________C__G____GUUUU...AAG-3'\n______________UGGUACUG___GCGG_GUG_GCAA_GU_GUGC\n______________|::|||||___||::_|||_||||_||_||||\n______________AUUAUGAC___CGUU_CAC_CGUU_CA_CACG\n3'-UUU...GAUUC________CUU____A___U____A__G____AAAGU...GCG-5'\n_____________|________________________________|\n_____________66_______________________________33\n |
75 -- 81 |
58 -- 64 |
-29.9398 kcal/mol |
12.3081 kcal/mol |
6.77229 kcal/mol |
73 104@LB@ | |@LB@5'-GGC...CGUGA AUU C G GUUUU...AAG-3'@LB@ UGGUACUG GCGG GUG GCAA GU GUGC@LB@ |::||||| ||:: ||| |||| || ||||@LB@ AUUAUGAC CGUU CAC CGUU CA CACG@LB@3'-UUU...GAUUC CUU A U A G AAAGU...GCG-5'@LB@ | |@LB@ 66 33@LB@@LB@@LB@Energy -10.86 kcal/mol@LB@Hybridization Energy -29.9398 kcal/mol@LB@Unfolding Energy - mRNA 12.3081 kcal/mol@LB@Unfolding Energy - sRNA 6.77229 kcal/mol@LB@@LB@Position - mRNA 74 -- 103@LB@Position - sRNA 34 -- 65@LB@Position Seed - mRNA 75 -- 81@LB@Position Seed - sRNA 58 -- 64@LB@ |
| 47 |
0.004313 |
0.2905 |
b3739 |
atpI |
-14.34 |
0.035947 |
179 -- 205 |
38 -- 58 |
ATP synthase membrane-bound accessory factor |
|
_____________178_________________________206\n_____________|___________________________|\n5'-GAA...UCGAA________GA____AAAAC________UGUGU...ACC-3'\n______________GGGAGCAG__GUGA_____GUGAUGUC\n______________||:||||:__||||_____|::|||||\n______________CCUUCGUU__CACU_____CGUUACAG\n3'-UUU...UAUGA________A__________________CACGA...GCG-5'\n_____________|___________________________|\n_____________59__________________________37\n |
199 -- 205 |
38 -- 44 |
-24.0387 kcal/mol |
6.48162 kcal/mol |
3.21639 kcal/mol |
178 206@LB@ | |@LB@5'-GAA...UCGAA GA AAAAC UGUGU...ACC-3'@LB@ GGGAGCAG GUGA GUGAUGUC@LB@ ||:||||: |||| |::|||||@LB@ CCUUCGUU CACU CGUUACAG@LB@3'-UUU...UAUGA A CACGA...GCG-5'@LB@ | |@LB@ 59 37@LB@@LB@@LB@Energy -14.34 kcal/mol@LB@Hybridization Energy -24.0387 kcal/mol@LB@Unfolding Energy - mRNA 6.48162 kcal/mol@LB@Unfolding Energy - sRNA 3.21639 kcal/mol@LB@@LB@Position - mRNA 179 -- 205@LB@Position - sRNA 38 -- 58@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 184 |
0.02284 |
0.4113 |
b2512 |
bamB |
-14.63 |
0.032048 |
112 -- 136 |
38 -- 58 |
BamABCDE complex OM biogenesis lipoprotein |
|
_____________111_______________________137\n_____________|_________________________|\n5'-GCU...GCAUG________GC____AAA________ACUCC...CCC-3'\n______________GGAAGCAG__GUGA___GCGAUGUU\n______________|||||||:__||||___||:||||:\n______________CCUUCGUU__CACU___CGUUACAG\n3'-UUU...UAUGA________A________________CACGA...GCG-5'\n_____________|_________________________|\n_____________59________________________37\n |
130 -- 136 |
38 -- 44 |
-25.7462 kcal/mol |
7.89766 kcal/mol |
3.21639 kcal/mol |
111 137@LB@ | |@LB@5'-GCU...GCAUG GC AAA ACUCC...CCC-3'@LB@ GGAAGCAG GUGA GCGAUGUU@LB@ |||||||: |||| ||:||||:@LB@ CCUUCGUU CACU CGUUACAG@LB@3'-UUU...UAUGA A CACGA...GCG-5'@LB@ | |@LB@ 59 37@LB@@LB@@LB@Energy -14.63 kcal/mol@LB@Hybridization Energy -25.7462 kcal/mol@LB@Unfolding Energy - mRNA 7.89766 kcal/mol@LB@Unfolding Energy - sRNA 3.21639 kcal/mol@LB@@LB@Position - mRNA 112 -- 136@LB@Position - sRNA 38 -- 58@LB@Position Seed - mRNA 130 -- 136@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 130 |
0.01403 |
0.3627 |
b3531 |
bcsZ |
-10.44 |
0.160598 |
268 -- 291 |
50 -- 82 |
endo-1 4-D-glucanase |
|
_____________267_______________________________292\n_____________|_________________________________|\n5'-UCA...AGCCU_________CU______________________UUAAA...AGG-3'\n______________GUACCUGGC__GC_________CUGGGAGCAGU\n______________|:|||:|||__||_________||||:||||:|\n______________CGUGGGCCG__CG_________GACCUUCGUUA\n___3'-UUUUCGGU_________AC__AUUCAUUAU___________CACUC...GCG-5'\n_____________|_________________________________|\n_____________83________________________________49\n |
283 -- 289 |
52 -- 58 |
-33.5305 kcal/mol |
8.70748 kcal/mol |
14.3864 kcal/mol |
267 292@LB@ | |@LB@5'-UCA...AGCCU CU UUAAA...AGG-3'@LB@ GUACCUGGC GC CUGGGAGCAGU@LB@ |:|||:||| || ||||:||||:|@LB@ CGUGGGCCG CG GACCUUCGUUA@LB@ 3'-UUUUCGGU AC AUUCAUUAU CACUC...GCG-5'@LB@ | |@LB@ 83 49@LB@@LB@@LB@Energy -10.44 kcal/mol@LB@Hybridization Energy -33.5305 kcal/mol@LB@Unfolding Energy - mRNA 8.70748 kcal/mol@LB@Unfolding Energy - sRNA 14.3864 kcal/mol@LB@@LB@Position - mRNA 268 -- 291@LB@Position - sRNA 50 -- 82@LB@Position Seed - mRNA 283 -- 289@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 113 |
0.01187 |
0.3513 |
b2901 |
bglA |
-10.39 |
0.163088 |
124 -- 152 |
36 -- 60 |
6-phospho-beta-glucosidase A |
|
_____________123___________________________153\n_____________|_____________________________|\n5'-UUC...UCAUC______A__U__AAAAAA___________UUGGC...GGC-3'\n______________CUGGAA_CG_UG______AGUGAUGUCGU\n______________||||||_|:_||______||::|||||||\n______________GACCUU_GU_AC______UCGUUACAGCA\n3'-UUU...AUUAU______C__U__AC_______________CGAAA...GCG-5'\n_____________|_____________________________|\n_____________61____________________________35\n |
146 -- 152 |
36 -- 42 |
-20.7652 kcal/mol |
7.06987 kcal/mol |
3.30077 kcal/mol |
123 153@LB@ | |@LB@5'-UUC...UCAUC A U AAAAAA UUGGC...GGC-3'@LB@ CUGGAA CG UG AGUGAUGUCGU@LB@ |||||| |: || ||::|||||||@LB@ GACCUU GU AC UCGUUACAGCA@LB@3'-UUU...AUUAU C U AC CGAAA...GCG-5'@LB@ | |@LB@ 61 35@LB@@LB@@LB@Energy -10.39 kcal/mol@LB@Hybridization Energy -20.7652 kcal/mol@LB@Unfolding Energy - mRNA 7.06987 kcal/mol@LB@Unfolding Energy - sRNA 3.30077 kcal/mol@LB@@LB@Position - mRNA 124 -- 152@LB@Position - sRNA 36 -- 60@LB@Position Seed - mRNA 146 -- 152@LB@Position Seed - sRNA 36 -- 42@LB@ |
