| 113 |
0.001932 |
0.07857 |
pa1964 |
N/A |
-9.53 |
0.221537 |
258 -- 274 |
103 -- 120 |
ABC-F family ATPase |
|
_____________257________________275\n_____________|__________________|\n5'-GCA...ACGGC_____CUAC_________CGGCG...CGA-3'\n______________AACCG_____GGCCUGAU\n______________|||||_____:|||||||\n______________UUGGC_____UCGGACUA\n3'-UUU...AGUUU_____ACUAA________CUCCU...GUU-5'\n_____________|__________________|\n_____________121________________102\n |
268 -- 274 |
103 -- 109 |
-16.8873 kcal/mol |
5.11311 kcal/mol |
2.24268 kcal/mol |
257 275@LB@ | |@LB@5'-GCA...ACGGC CUAC CGGCG...CGA-3'@LB@ AACCG GGCCUGAU@LB@ ||||| :|||||||@LB@ UUGGC UCGGACUA@LB@3'-UUU...AGUUU ACUAA CUCCU...GUU-5'@LB@ | |@LB@ 121 102@LB@@LB@@LB@Energy -9.53 kcal/mol@LB@Hybridization Energy -16.8873 kcal/mol@LB@Unfolding Energy - mRNA 5.11311 kcal/mol@LB@Unfolding Energy - sRNA 2.24268 kcal/mol@LB@@LB@Position - mRNA 258 -- 274@LB@Position - sRNA 103 -- 120@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 103 -- 109@LB@ |
| 34 |
0.0001037 |
0.01388 |
pa0494 |
N/A |
-14.76 |
0.012046 |
49 -- 92 |
75 -- 117 |
acetyl-CoA carboxylase biotin carboxylase subunit |
|
_____________48_______________________________________________93\n_____________|________________________________________________|\n5'-CGA...GGCAG______C__G_____C________________C__UUU_____AG___AGGCC...CGG-3'\n______________CGUGAU_GG_CUGAU___GAGGUGA__UGAAG_AG___UCCGA__UGC\n______________||||||_:|_|||||___|||:|:|__|||||_||___|||||__|||\n______________GCACUA_UC_GACUA___CUCUAUU__ACUUC_UC___AGGCU__ACG\n3'-UUU...UUUUG______A__G_____CUC_______AG________________G____CACCC...GUU-5'\n_____________|________________________________________________|\n_____________118______________________________________________74\n |
65 -- 71 |
93 -- 99 |
-39.1416 kcal/mol |
12.2169 kcal/mol |
12.1721 kcal/mol |
48 93@LB@ | |@LB@5'-CGA...GGCAG C G C C UUU AG AGGCC...CGG-3'@LB@ CGUGAU GG CUGAU GAGGUGA UGAAG AG UCCGA UGC@LB@ |||||| :| ||||| |||:|:| ||||| || ||||| |||@LB@ GCACUA UC GACUA CUCUAUU ACUUC UC AGGCU ACG@LB@3'-UUU...UUUUG A G CUC AG G CACCC...GUU-5'@LB@ | |@LB@ 118 74@LB@@LB@@LB@Energy -14.76 kcal/mol@LB@Hybridization Energy -39.1416 kcal/mol@LB@Unfolding Energy - mRNA 12.2169 kcal/mol@LB@Unfolding Energy - sRNA 12.1721 kcal/mol@LB@@LB@Position - mRNA 49 -- 92@LB@Position - sRNA 75 -- 117@LB@Position Seed - mRNA 65 -- 71@LB@Position Seed - sRNA 93 -- 99@LB@ |
| 99 |
0.001467 |
0.06809 |
pa5206 |
argE |
-18.10 |
0.000993 |
157 -- 251 |
40 -- 119 |
acetylornithine deacetylase |
|
_____________156______________________________________________________________________________________________252\n_____________|________________________________________________________________________________________________|\n5'-UGA...CCACU____C___A____A________CUC___CC__G__________CA___C___UGCC______GAAAGAC_____C_G__C_______GC____U__UCCGU...UGG-3'\n______________GCCG_GAU_GGCC_UGAUGGGG___GAU__GU_UGGAGAGUCC___UG_CGU____GUCUCU_______CAGUU_G_CG_GCUGAUC__CGCG_CU\n______________:|||_|||_:|||_|||||:||___|||__:|_||:|||||||___||_|||____||||||_______|||:|_:_||_|||||||__||||_|:\n______________UGGC_CUA_UCGG_ACUACUCC___CUA__UA_ACUUCUCAGG___AC_GCA____CAGAGA_______GUCGA_U_GC_CGACUAG__GCGC_GG\n3'-UUU...GUUUU____A___A_____________U_____U___G__________CUG______CC____________________A_G__________A_____U__UCAAC...GUU-5'\n_____________|________________________________________________________________________________________________|\n_____________120______________________________________________________________________________________________39\n |
193 -- 199 |
81 -- 87 |
-84.9505 kcal/mol |
43.4484 kcal/mol |
23.4062 kcal/mol |
156 252@LB@ | |@LB@5'-UGA...CCACU C A A CUC CC G CA C UGCC GAAAGAC C G C GC U UCCGU...UGG-3'@LB@ GCCG GAU GGCC UGAUGGGG GAU GU UGGAGAGUCC UG CGU GUCUCU CAGUU G CG GCUGAUC CGCG CU@LB@ :||| ||| :||| |||||:|| ||| :| ||:||||||| || ||| |||||| |||:| : || ||||||| |||| |:@LB@ UGGC CUA UCGG ACUACUCC CUA UA ACUUCUCAGG AC GCA CAGAGA GUCGA U GC CGACUAG GCGC GG@LB@3'-UUU...GUUUU A A U U G CUG CC A G A U UCAAC...GUU-5'@LB@ | |@LB@ 120 39@LB@@LB@@LB@Energy -18.10 kcal/mol@LB@Hybridization Energy -84.9505 kcal/mol@LB@Unfolding Energy - mRNA 43.4484 kcal/mol@LB@Unfolding Energy - sRNA 23.4062 kcal/mol@LB@@LB@Position - mRNA 157 -- 251@LB@Position - sRNA 40 -- 119@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 81 -- 87@LB@ |
| 68 |
0.0007335 |
0.0493 |
pa0794 |
N/A |
-9.72 |
0.203453 |
182 -- 194 |
107 -- 118 |
aconitate hydratase |
|
_____________181_____________________195\n_____________|_______________________|\n5'-CAU...ACACC________GAGUCCG____A___ACAGC...AGC-3'\n______________CCGUGAUU_______AGCC_UGA\n______________||||||||_______||||_|||\n______________GGCACUAA_______UCGG_ACU\n3'-UUU...UUUUU_______________________ACUCC...GUU-5'\n_____________|_______________________|\n_____________119_____________________106\n |
183 -- 189 |
111 -- 117 |
-17.4679 kcal/mol |
6.47077 kcal/mol |
2.24144 kcal/mol |
181 195@LB@ | |@LB@5'-CAU...ACACC GAGUCCG A ACAGC...AGC-3'@LB@ CCGUGAUU AGCC UGA@LB@ |||||||| |||| |||@LB@ GGCACUAA UCGG ACU@LB@3'-UUU...UUUUU ACUCC...GUU-5'@LB@ | |@LB@ 119 106@LB@@LB@@LB@Energy -9.72 kcal/mol@LB@Hybridization Energy -17.4679 kcal/mol@LB@Unfolding Energy - mRNA 6.47077 kcal/mol@LB@Unfolding Energy - sRNA 2.24144 kcal/mol@LB@@LB@Position - mRNA 182 -- 194@LB@Position - sRNA 107 -- 118@LB@Position Seed - mRNA 183 -- 189@LB@Position Seed - sRNA 111 -- 117@LB@ |
| 101 |
0.001673 |
0.07499 |
pa1787 |
acnB |
-10.32 |
0.154094 |
277 -- 296 |
100 -- 121 |
aconitate hydratase B |
|
_____________276_____________________297\n_____________|_______________________|\n5'-UAC...CGAAC______CA___________C___CUGC-3'\n______________AGACCG_____GGCCUGGU_GAG\n______________|:||||_____:|||||:|_|||\n______________UUUGGC_____UCGGACUA_CUC\n3'-UUU...CAGUU______ACUAA____________CUCUA...GUU-5'\n_____________|_______________________|\n_____________122_____________________99\n |
286 -- 292 |
103 -- 109 |
-20.0253 kcal/mol |
7.46245 kcal/mol |
2.24936 kcal/mol |
276 297@LB@ | |@LB@5'-UAC...CGAAC CA C CUGC-3'@LB@ AGACCG GGCCUGGU GAG@LB@ |:|||| :|||||:| |||@LB@ UUUGGC UCGGACUA CUC@LB@3'-UUU...CAGUU ACUAA CUCUA...GUU-5'@LB@ | |@LB@ 122 99@LB@@LB@@LB@Energy -10.32 kcal/mol@LB@Hybridization Energy -20.0253 kcal/mol@LB@Unfolding Energy - mRNA 7.46245 kcal/mol@LB@Unfolding Energy - sRNA 2.24936 kcal/mol@LB@@LB@Position - mRNA 277 -- 296@LB@Position - sRNA 100 -- 121@LB@Position Seed - mRNA 286 -- 292@LB@Position Seed - sRNA 103 -- 109@LB@ |
| 141 |
0.002959 |
0.09644 |
pa5519 |
N/A |
-12.18 |
0.058415 |
260 -- 272 |
100 -- 118 |
acyl-CoA thioesterase |
pa2693 |
_____________259_________________273\n_____________|___________________|\n5'-GGG...CCCGC___________________AGAAA...ACA-3'\n______________CCGU______CCUGAUGAG\n______________||||______|||||||||\n______________GGCA______GGACUACUC\n3'-UUU...UUUUU____CUAAUC_________CUCUA...GUU-5'\n_____________|___________________|\n_____________119_________________99\n |
266 -- 272 |
100 -- 106 |
-18.4857 kcal/mol |
4.06476 kcal/mol |
2.24889 kcal/mol |
259 273@LB@ | |@LB@5'-GGG...CCCGC AGAAA...ACA-3'@LB@ CCGU CCUGAUGAG@LB@ |||| |||||||||@LB@ GGCA GGACUACUC@LB@3'-UUU...UUUUU CUAAUC CUCUA...GUU-5'@LB@ | |@LB@ 119 99@LB@@LB@@LB@Energy -12.18 kcal/mol@LB@Hybridization Energy -18.4857 kcal/mol@LB@Unfolding Energy - mRNA 4.06476 kcal/mol@LB@Unfolding Energy - sRNA 2.24889 kcal/mol@LB@@LB@Position - mRNA 260 -- 272@LB@Position - sRNA 100 -- 118@LB@Position Seed - mRNA 266 -- 272@LB@Position Seed - sRNA 100 -- 106@LB@ |
| 74 |
0.0008152 |
0.04991 |
pa3942 |
tesB |
-9.59 |
0.215645 |
1 -- 36 |
40 -- 80 |
acyl-CoA thioesterase II |
|
______________1_________________________________________37\n______________|_________________________________________|\n___________5'-______C____A_______G__________CUA__A______CCCUG...AGC-3'\n______________GGCUGU_UGGG_____CGG__UAUCGGCUG___CU__CGACC\n______________|:|||:_||||_____|:|__||:||||||___||__|||||\n______________CUGACG_ACCC_____GUC__AUGGCCGAC___GA__GCUGG\n3'-UUU...UCAGG______C____AGAGA___GA_________UA___GC_____UCAAC...GUU-5'\n_____________|__________________________________________|\n_____________81_________________________________________39\n |
19 -- 25 |
51 -- 57 |
-37.7037 kcal/mol |
9.97985 kcal/mol |
18.133 kcal/mol |
1 37@LB@ | |@LB@ 5'- C A G CUA A CCCUG...AGC-3'@LB@ GGCUGU UGGG CGG UAUCGGCUG CU CGACC@LB@ |:|||: |||| |:| ||:|||||| || |||||@LB@ CUGACG ACCC GUC AUGGCCGAC GA GCUGG@LB@3'-UUU...UCAGG C AGAGA GA UA GC UCAAC...GUU-5'@LB@ | |@LB@ 81 39@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -37.7037 kcal/mol@LB@Unfolding Energy - mRNA 9.97985 kcal/mol@LB@Unfolding Energy - sRNA 18.133 kcal/mol@LB@@LB@Position - mRNA 1 -- 36@LB@Position - sRNA 40 -- 80@LB@Position Seed - mRNA 19 -- 25@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 32 |
8.271e-05 |
0.01177 |
pa5176 |
N/A |
-17.77 |
0.001308 |
216 -- 255 |
75 -- 119 |
ADP-ribose diphosphatase NudE |
|
_____________215_____________________________________________256\n_____________|_______________________________________________|\n5'-GAA...AACCC_____ACUC___________C_____C___GC_______________UCGAU...AGC-3'\n______________ACCGU_____GCC_____AG_GAGAU_GUC__GAAGAG_CCGACUGU\n______________|||||_____|||_____||_|||||_:||__||||||_|||||||:\n______________UGGCA_____CGG_____UC_CUCUA_UAG__CUUCUC_GGCUGACG\n3'-UUU...GUUUU_____CUAAU___ACUAC________U___A_______A________CACCC...GUU-5'\n_____________|_______________________________________________|\n_____________120_____________________________________________74\n |
249 -- 255 |
75 -- 81 |
-41.4292 kcal/mol |
11.4765 kcal/mol |
12.1884 kcal/mol |
215 256@LB@ | |@LB@5'-GAA...AACCC ACUC C C GC UCGAU...AGC-3'@LB@ ACCGU GCC AG GAGAU GUC GAAGAG CCGACUGU@LB@ ||||| ||| || ||||| :|| |||||| |||||||:@LB@ UGGCA CGG UC CUCUA UAG CUUCUC GGCUGACG@LB@3'-UUU...GUUUU CUAAU ACUAC U A A CACCC...GUU-5'@LB@ | |@LB@ 120 74@LB@@LB@@LB@Energy -17.77 kcal/mol@LB@Hybridization Energy -41.4292 kcal/mol@LB@Unfolding Energy - mRNA 11.4765 kcal/mol@LB@Unfolding Energy - sRNA 12.1884 kcal/mol@LB@@LB@Position - mRNA 216 -- 255@LB@Position - sRNA 75 -- 119@LB@Position Seed - mRNA 249 -- 255@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 109 |
0.001808 |
0.07562 |
pa0202 |
N/A |
-7.70 |
0.456423 |
178 -- 185 |
75 -- 82 |
amidase |
pa4342 |
_____________177______186\n_____________|________|\n5'-CCC...CCUUC________CAAGG...UGC-3'\n______________UCGACUGC\n______________:|||||||\n______________GGCUGACG\n3'-UUU...UCUCA________CACCC...GUU-5'\n_____________|________|\n_____________83_______74\n |
179 -- 185 |
75 -- 81 |
-13.4138 kcal/mol |
1.61599 kcal/mol |
4.09516 kcal/mol |
177 186@LB@ | |@LB@5'-CCC...CCUUC CAAGG...UGC-3'@LB@ UCGACUGC@LB@ :|||||||@LB@ GGCUGACG@LB@3'-UUU...UCUCA CACCC...GUU-5'@LB@ | |@LB@ 83 74@LB@@LB@@LB@Energy -7.70 kcal/mol@LB@Hybridization Energy -13.4138 kcal/mol@LB@Unfolding Energy - mRNA 1.61599 kcal/mol@LB@Unfolding Energy - sRNA 4.09516 kcal/mol@LB@@LB@Position - mRNA 178 -- 185@LB@Position - sRNA 75 -- 82@LB@Position Seed - mRNA 179 -- 185@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 44 |
0.0002709 |
0.02829 |
pa1340 |
N/A |
-13.31 |
0.030188 |
17 -- 34 |
101 -- 117 |
amino acid ABC transporter permease |
|
_____________16_________________35\n_____________|__________________|\n5'-AAC...GGCGU__C____C__________AGCUG...UCG-3'\n______________CG_UGAU_GGCCUGAUGG\n______________||_||||_:||||||||:\n______________GC_ACUA_UCGGACUACU\n3'-UUU...UUUUG_______A__________CCUCU...GUU-5'\n_____________|__________________|\n_____________118________________100\n |
28 -- 34 |
101 -- 107 |
-22.4618 kcal/mol |
6.92464 kcal/mol |
2.23144 kcal/mol |
16 35@LB@ | |@LB@5'-AAC...GGCGU C C AGCUG...UCG-3'@LB@ CG UGAU GGCCUGAUGG@LB@ || |||| :||||||||:@LB@ GC ACUA UCGGACUACU@LB@3'-UUU...UUUUG A CCUCU...GUU-5'@LB@ | |@LB@ 118 100@LB@@LB@@LB@Energy -13.31 kcal/mol@LB@Hybridization Energy -22.4618 kcal/mol@LB@Unfolding Energy - mRNA 6.92464 kcal/mol@LB@Unfolding Energy - sRNA 2.23144 kcal/mol@LB@@LB@Position - mRNA 17 -- 34@LB@Position - sRNA 101 -- 117@LB@Position Seed - mRNA 28 -- 34@LB@Position Seed - sRNA 101 -- 107@LB@ |
