108 |
0.001802 |
0.07562 |
pa0365 |
N/A |
-14.54 |
0.013920 |
243 -- 252 |
101 -- 110 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________242________253\n_____________|__________|\n5'-GCC...GACGC__________AAGUC...CCG-3'\n______________AGCCUGAUGA\n______________||||||||||\n______________UCGGACUACU\n3'-UUU...ACUAA__________CCUCU...GUU-5'\n_____________|__________|\n_____________111________100\n |
246 -- 252 |
101 -- 107 |
-17.5523 kcal/mol |
0.900236 kcal/mol |
2.11196 kcal/mol |
242 253@LB@ | |@LB@5'-GCC...GACGC AAGUC...CCG-3'@LB@ AGCCUGAUGA@LB@ ||||||||||@LB@ UCGGACUACU@LB@3'-UUU...ACUAA CCUCU...GUU-5'@LB@ | |@LB@ 111 100@LB@@LB@@LB@Energy -14.54 kcal/mol@LB@Hybridization Energy -17.5523 kcal/mol@LB@Unfolding Energy - mRNA 0.900236 kcal/mol@LB@Unfolding Energy - sRNA 2.11196 kcal/mol@LB@@LB@Position - mRNA 243 -- 252@LB@Position - sRNA 101 -- 110@LB@Position Seed - mRNA 246 -- 252@LB@Position Seed - sRNA 101 -- 107@LB@ |
111 |
0.001873 |
0.07755 |
pa4347 |
N/A |
-11.13 |
0.102611 |
35 -- 49 |
91 -- 105 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________34______________50\n_____________|_______________|\n5'-CUG...ACAUG____U__________GUGCC...UCC-3'\n______________GAUG_GGAGAUGAUC\n______________||||_||||||:|||\n______________CUAC_CCUCUAUUAG\n3'-UUU...UCGGA____U__________ACUUC...GUU-5'\n_____________|_______________|\n_____________106_____________90\n |
41 -- 47 |
93 -- 99 |
-20.2492 kcal/mol |
4.9637 kcal/mol |
4.15885 kcal/mol |
34 50@LB@ | |@LB@5'-CUG...ACAUG U GUGCC...UCC-3'@LB@ GAUG GGAGAUGAUC@LB@ |||| ||||||:|||@LB@ CUAC CCUCUAUUAG@LB@3'-UUU...UCGGA U ACUUC...GUU-5'@LB@ | |@LB@ 106 90@LB@@LB@@LB@Energy -11.13 kcal/mol@LB@Hybridization Energy -20.2492 kcal/mol@LB@Unfolding Energy - mRNA 4.9637 kcal/mol@LB@Unfolding Energy - sRNA 4.15885 kcal/mol@LB@@LB@Position - mRNA 35 -- 49@LB@Position - sRNA 91 -- 105@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 93 -- 99@LB@ |
112 |
0.001904 |
0.07812 |
pa5310 |
N/A |
-10.92 |
0.114175 |
276 -- 285 |
74 -- 83 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________275________286\n_____________|__________|\n5'-CGA...CCCUC__________CCAGC...CGC-3'\n______________UCCGGCUGCG\n______________||||:|||||\n______________AGGCUGACGC\n3'-UUU...UUCUC__________ACCCA...GUU-5'\n_____________|__________|\n_____________84_________73\n |
279 -- 285 |
74 -- 80 |
-18.1359 kcal/mol |
3.11348 kcal/mol |
4.10139 kcal/mol |
275 286@LB@ | |@LB@5'-CGA...CCCUC CCAGC...CGC-3'@LB@ UCCGGCUGCG@LB@ ||||:|||||@LB@ AGGCUGACGC@LB@3'-UUU...UUCUC ACCCA...GUU-5'@LB@ | |@LB@ 84 73@LB@@LB@@LB@Energy -10.92 kcal/mol@LB@Hybridization Energy -18.1359 kcal/mol@LB@Unfolding Energy - mRNA 3.11348 kcal/mol@LB@Unfolding Energy - sRNA 4.10139 kcal/mol@LB@@LB@Position - mRNA 276 -- 285@LB@Position - sRNA 74 -- 83@LB@Position Seed - mRNA 279 -- 285@LB@Position Seed - sRNA 74 -- 80@LB@ |
114 |
0.001956 |
0.07883 |
pa1616 |
N/A |
-7.83 |
0.436748 |
16 -- 25 |
101 -- 110 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________15_________26\n_____________|__________|\n5'-GGC...ACGGC__________CUUUC...AGA-3'\n______________AGCCUGAUGG\n______________|||||||||:\n______________UCGGACUACU\n3'-UUU...ACUAA__________CCUCU...GUU-5'\n_____________|__________|\n_____________111________100\n |
19 -- 25 |
101 -- 107 |
-16.0192 kcal/mol |
6.07491 kcal/mol |
2.11196 kcal/mol |
15 26@LB@ | |@LB@5'-GGC...ACGGC CUUUC...AGA-3'@LB@ AGCCUGAUGG@LB@ |||||||||:@LB@ UCGGACUACU@LB@3'-UUU...ACUAA CCUCU...GUU-5'@LB@ | |@LB@ 111 100@LB@@LB@@LB@Energy -7.83 kcal/mol@LB@Hybridization Energy -16.0192 kcal/mol@LB@Unfolding Energy - mRNA 6.07491 kcal/mol@LB@Unfolding Energy - sRNA 2.11196 kcal/mol@LB@@LB@Position - mRNA 16 -- 25@LB@Position - sRNA 101 -- 110@LB@Position Seed - mRNA 19 -- 25@LB@Position Seed - sRNA 101 -- 107@LB@ |
116 |
0.00199 |
0.07883 |
pa4478 |
N/A |
-13.34 |
0.029660 |
177 -- 225 |
39 -- 82 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________176____________________________________________________226\n_____________|______________________________________________________|\n5'-CAA...AUCGC__________UUCCC___AGC______________UC____U_______CU___CCUCG...AGU-3'\n______________CCGAC_GCGU_____GGG___CUC_CA___UGCCG__GCUG_AUCUCGC__CCG\n______________|||||_||||_____|||___|||_||___|:|||__||||_|||||||__||:\n______________GGCUG_CGCA_____CCC___GAG_GU___AUGGC__CGAC_UAGAGCG__GGU\n3'-UUU...UCUCA_____A____________A_____A__CGA___________________CU___CAACU...GUU-5'\n_____________|______________________________________________________|\n_____________83_____________________________________________________38\n |
214 -- 220 |
44 -- 50 |
-46.9389 kcal/mol |
14.7161 kcal/mol |
18.8872 kcal/mol |
176 226@LB@ | |@LB@5'-CAA...AUCGC UUCCC AGC UC U CU CCUCG...AGU-3'@LB@ CCGAC GCGU GGG CUC CA UGCCG GCUG AUCUCGC CCG@LB@ ||||| |||| ||| ||| || |:||| |||| ||||||| ||:@LB@ GGCUG CGCA CCC GAG GU AUGGC CGAC UAGAGCG GGU@LB@3'-UUU...UCUCA A A A CGA CU CAACU...GUU-5'@LB@ | |@LB@ 83 38@LB@@LB@@LB@Energy -13.34 kcal/mol@LB@Hybridization Energy -46.9389 kcal/mol@LB@Unfolding Energy - mRNA 14.7161 kcal/mol@LB@Unfolding Energy - sRNA 18.8872 kcal/mol@LB@@LB@Position - mRNA 177 -- 225@LB@Position - sRNA 39 -- 82@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 44 -- 50@LB@ |
117 |
0.002052 |
0.07999 |
pa0290 |
N/A |
-8.56 |
0.333144 |
143 -- 150 |
40 -- 47 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________142______151\n_____________|________|\n5'-CCU...UAUCG________CCUGC...AAC-3'\n______________UCGCGACC\n______________||||||||\n______________AGCGCUGG\n3'-UUU...ACUAG________UCAAC...GUU-5'\n_____________|________|\n_____________48_______39\n |
144 -- 150 |
40 -- 46 |
-14.5279 kcal/mol |
2.30284 kcal/mol |
3.66533 kcal/mol |
142 151@LB@ | |@LB@5'-CCU...UAUCG CCUGC...AAC-3'@LB@ UCGCGACC@LB@ ||||||||@LB@ AGCGCUGG@LB@3'-UUU...ACUAG UCAAC...GUU-5'@LB@ | |@LB@ 48 39@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -14.5279 kcal/mol@LB@Unfolding Energy - mRNA 2.30284 kcal/mol@LB@Unfolding Energy - sRNA 3.66533 kcal/mol@LB@@LB@Position - mRNA 143 -- 150@LB@Position - sRNA 40 -- 47@LB@Position Seed - mRNA 144 -- 150@LB@Position Seed - sRNA 40 -- 46@LB@ |
120 |
0.002089 |
0.07999 |
pa3670 |
N/A |
-15.68 |
0.006401 |
170 -- 246 |
44 -- 120 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________169________________________________________________________________________________________247\n_____________|__________________________________________________________________________________________|\n5'-GCU...CGGUC________AGAA____GA___________________________GAAAC_____UU_______U___GCCGG____UU_______G___UGGCG...GGC-3'\n______________GACC_UGA____AGCC__AUGAGGGG__________GAGU_CGAU_____GCGUG__GUC_CUC_GGC_____GCUG__GCUGAUC_CGC\n______________:|||_|||____||||__||||||:|__________||||_|||:_____|||||__|||_|||_:||_____:|:|__|||||||_|||\n______________UUGG_ACU____UCGG__UACUCCUC__________CUCA_GCUG_____CGCAC__CAG_GAG_UCG_____UGGC__CGACUAG_GCG\n3'-UUU...AGUUU____C___AA______AC________UAUUAGACUU____G____A_________C____A_______AA________________A___CUGGU...GUU-5'\n_____________|__________________________________________________________________________________________|\n_____________121________________________________________________________________________________________43\n |
236 -- 242 |
48 -- 54 |
-64.9835 kcal/mol |
25.9985 kcal/mol |
23.3102 kcal/mol |
169 247@LB@ | |@LB@5'-GCU...CGGUC AGAA GA GAAAC UU U GCCGG UU G UGGCG...GGC-3'@LB@ GACC UGA AGCC AUGAGGGG GAGU CGAU GCGUG GUC CUC GGC GCUG GCUGAUC CGC@LB@ :||| ||| |||| ||||||:| |||| |||: ||||| ||| ||| :|| :|:| ||||||| |||@LB@ UUGG ACU UCGG UACUCCUC CUCA GCUG CGCAC CAG GAG UCG UGGC CGACUAG GCG@LB@3'-UUU...AGUUU C AA AC UAUUAGACUU G A C A AA A CUGGU...GUU-5'@LB@ | |@LB@ 121 43@LB@@LB@@LB@Energy -15.68 kcal/mol@LB@Hybridization Energy -64.9835 kcal/mol@LB@Unfolding Energy - mRNA 25.9985 kcal/mol@LB@Unfolding Energy - sRNA 23.3102 kcal/mol@LB@@LB@Position - mRNA 170 -- 246@LB@Position - sRNA 44 -- 120@LB@Position Seed - mRNA 236 -- 242@LB@Position Seed - sRNA 48 -- 54@LB@ |
122 |
0.002226 |
0.08331 |
pa4286 |
N/A |
-14.46 |
0.014621 |
171 -- 194 |
98 -- 121 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________170_______________________195\n_____________|_________________________|\n5'-GGU...GAGCC________CC________AA_____AGAAU...GGC-3'\n______________GAGCCGUG___AGCCUGG__GAGGA\n______________:|:|||||___||||||:__|||||\n______________UUUGGCAC___UCGGACU__CUCCU\n3'-UUU...CAGUU________UAA_______A______CUAUU...GUU-5'\n_____________|_________________________|\n_____________122_______________________97\n |
181 -- 187 |
104 -- 110 |
-28.256 kcal/mol |
11.5428 kcal/mol |
2.25186 kcal/mol |
170 195@LB@ | |@LB@5'-GGU...GAGCC CC AA AGAAU...GGC-3'@LB@ GAGCCGUG AGCCUGG GAGGA@LB@ :|:||||| ||||||: |||||@LB@ UUUGGCAC UCGGACU CUCCU@LB@3'-UUU...CAGUU UAA A CUAUU...GUU-5'@LB@ | |@LB@ 122 97@LB@@LB@@LB@Energy -14.46 kcal/mol@LB@Hybridization Energy -28.256 kcal/mol@LB@Unfolding Energy - mRNA 11.5428 kcal/mol@LB@Unfolding Energy - sRNA 2.25186 kcal/mol@LB@@LB@Position - mRNA 171 -- 194@LB@Position - sRNA 98 -- 121@LB@Position Seed - mRNA 181 -- 187@LB@Position Seed - sRNA 104 -- 110@LB@ |
124 |
0.002337 |
0.08662 |
pa3949 |
N/A |
-9.36 |
0.238904 |
5 -- 33 |
38 -- 61 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________4_____________________________34\n_____________|_____________________________|\n_______5'-UGGC_____GA_________AGU__C_______GCGCA...GCA-3'\n______________CUUGC__CGGUUGAUC___UC_UGACCAG\n______________|||:|__|||:|||||___||_:||||||\n______________GAAUG__GCCGACUAG___AG_GCUGGUC\n3'-UUU...GAGUC_____________________C_______AACUC...GUU-5'\n_____________|_____________________________|\n_____________62____________________________37\n |
27 -- 33 |
38 -- 44 |
-29.1049 kcal/mol |
8.08568 kcal/mol |
11.6624 kcal/mol |
4 34@LB@ | |@LB@ 5'-UGGC GA AGU C GCGCA...GCA-3'@LB@ CUUGC CGGUUGAUC UC UGACCAG@LB@ |||:| |||:||||| || :||||||@LB@ GAAUG GCCGACUAG AG GCUGGUC@LB@3'-UUU...GAGUC C AACUC...GUU-5'@LB@ | |@LB@ 62 37@LB@@LB@@LB@Energy -9.36 kcal/mol@LB@Hybridization Energy -29.1049 kcal/mol@LB@Unfolding Energy - mRNA 8.08568 kcal/mol@LB@Unfolding Energy - sRNA 11.6624 kcal/mol@LB@@LB@Position - mRNA 5 -- 33@LB@Position - sRNA 38 -- 61@LB@Position Seed - mRNA 27 -- 33@LB@Position Seed - sRNA 38 -- 44@LB@ |
128 |
0.00255 |
0.0912 |
pa3463 |
N/A |
-7.51 |
0.486845 |
225 -- 240 |
104 -- 122 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________224_________________241\n_____________|___________________|\n5'-UCG...UGCUC_______ACAC________ACAAC...CGC-3'\n______________GAAGCCG_______CCUGA\n______________:||:|||_______|||||\n______________UUUUGGC_______GGACU\n3'-UUU...CCAGU_______ACUAAUC_____ACUCC...GUU-5'\n_____________|___________________|\n_____________123_________________103\n |
225 -- 231 |
116 -- 122 |
-12.6194 kcal/mol |
2.87159 kcal/mol |
2.24249 kcal/mol |
224 241@LB@ | |@LB@5'-UCG...UGCUC ACAC ACAAC...CGC-3'@LB@ GAAGCCG CCUGA@LB@ :||:||| |||||@LB@ UUUUGGC GGACU@LB@3'-UUU...CCAGU ACUAAUC ACUCC...GUU-5'@LB@ | |@LB@ 123 103@LB@@LB@@LB@Energy -7.51 kcal/mol@LB@Hybridization Energy -12.6194 kcal/mol@LB@Unfolding Energy - mRNA 2.87159 kcal/mol@LB@Unfolding Energy - sRNA 2.24249 kcal/mol@LB@@LB@Position - mRNA 225 -- 240@LB@Position - sRNA 104 -- 122@LB@Position Seed - mRNA 225 -- 231@LB@Position Seed - sRNA 116 -- 122@LB@ |