187 |
0.004933 |
0.1213 |
pa0613 |
N/A |
-16.40 |
0.003821 |
197 -- 220 |
101 -- 120 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________196______________________221\n_____________|________________________|\n5'-GAC...GACAC_________CAA____AUC_____AAUGC...CCA-3'\n______________GACCGUGAU___AGCC___GAUGA\n______________:||||||||___||||___|||||\n______________UUGGCACUA___UCGG___CUACU\n3'-UUU...AGUUU_________A______A_______CCUCU...GUU-5'\n_____________|________________________|\n_____________121______________________100\n |
199 -- 205 |
112 -- 118 |
-24.1405 kcal/mol |
5.50451 kcal/mol |
2.2437 kcal/mol |
196 221@LB@ | |@LB@5'-GAC...GACAC CAA AUC AAUGC...CCA-3'@LB@ GACCGUGAU AGCC GAUGA@LB@ :|||||||| |||| |||||@LB@ UUGGCACUA UCGG CUACU@LB@3'-UUU...AGUUU A A CCUCU...GUU-5'@LB@ | |@LB@ 121 100@LB@@LB@@LB@Energy -16.40 kcal/mol@LB@Hybridization Energy -24.1405 kcal/mol@LB@Unfolding Energy - mRNA 5.50451 kcal/mol@LB@Unfolding Energy - sRNA 2.2437 kcal/mol@LB@@LB@Position - mRNA 197 -- 220@LB@Position - sRNA 101 -- 120@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 112 -- 118@LB@ |
188 |
0.00503 |
0.1227 |
pa1766 |
N/A |
-13.35 |
0.029524 |
230 -- 250 |
100 -- 120 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________229___________________251\n_____________|_____________________|\n5'-CGA...GACCU_____C__AA___G_______CAUCA...ACC-3'\n______________GACCG_GA__GGC_UGAUGGG\n______________:||||_||__:||_|||||:|\n______________UUGGC_CU__UCG_ACUACUC\n3'-UUU...AGUUU_____A__AA___G_______CUCUA...GUU-5'\n_____________|_____________________|\n_____________121___________________99\n |
244 -- 250 |
100 -- 106 |
-24.1459 kcal/mol |
8.55357 kcal/mol |
2.24919 kcal/mol |
229 251@LB@ | |@LB@5'-CGA...GACCU C AA G CAUCA...ACC-3'@LB@ GACCG GA GGC UGAUGGG@LB@ :|||| || :|| |||||:|@LB@ UUGGC CU UCG ACUACUC@LB@3'-UUU...AGUUU A AA G CUCUA...GUU-5'@LB@ | |@LB@ 121 99@LB@@LB@@LB@Energy -13.35 kcal/mol@LB@Hybridization Energy -24.1459 kcal/mol@LB@Unfolding Energy - mRNA 8.55357 kcal/mol@LB@Unfolding Energy - sRNA 2.24919 kcal/mol@LB@@LB@Position - mRNA 230 -- 250@LB@Position - sRNA 100 -- 120@LB@Position Seed - mRNA 244 -- 250@LB@Position Seed - sRNA 100 -- 106@LB@ |
192 |
0.005234 |
0.1243 |
pa1840 |
N/A |
-6.31 |
0.681723 |
125 -- 149 |
99 -- 122 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________124_________________________150\n_____________|___________________________|\n5'-GCA...GCGCC_______GC_______G_____G____UCUUG...ACG-3'\n______________GAGAUCG__GA__GGC_CUGGU_GAGG\n______________:|:|:||__||__:||_|||:|_||||\n______________UUUUGGC__CU__UCG_GACUA_CUCC\n3'-UUU...CCAGU_______A___AA______________UCUAU...GUU-5'\n_____________|___________________________|\n_____________123_________________________98\n |
125 -- 131 |
116 -- 122 |
-20.2979 kcal/mol |
11.7389 kcal/mol |
2.25034 kcal/mol |
124 150@LB@ | |@LB@5'-GCA...GCGCC GC G G UCUUG...ACG-3'@LB@ GAGAUCG GA GGC CUGGU GAGG@LB@ :|:|:|| || :|| |||:| ||||@LB@ UUUUGGC CU UCG GACUA CUCC@LB@3'-UUU...CCAGU A AA UCUAU...GUU-5'@LB@ | |@LB@ 123 98@LB@@LB@@LB@Energy -6.31 kcal/mol@LB@Hybridization Energy -20.2979 kcal/mol@LB@Unfolding Energy - mRNA 11.7389 kcal/mol@LB@Unfolding Energy - sRNA 2.25034 kcal/mol@LB@@LB@Position - mRNA 125 -- 149@LB@Position - sRNA 99 -- 122@LB@Position Seed - mRNA 125 -- 131@LB@Position Seed - sRNA 116 -- 122@LB@ |
194 |
0.005258 |
0.1243 |
pa3808 |
N/A |
-13.66 |
0.024437 |
189 -- 216 |
98 -- 123 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________188__________________________217\n_____________|____________________________|\n5'-CGC...UAGUA_____G____CAAUG_______AAU___CCGAU...GGC-3'\n______________GAGGA_CGUG_____AGCCUGA___GGA\n______________:|::|_||||_____|||||||___|||\n______________UUUUU_GCAC_____UCGGACU___CCU\n3'-UUU...CCCAG_____G____UAA_________ACU___CUAUU...GUU-5'\n_____________|____________________________|\n_____________124__________________________97\n |
204 -- 210 |
104 -- 110 |
-22.3129 kcal/mol |
6.40825 kcal/mol |
2.25245 kcal/mol |
188 217@LB@ | |@LB@5'-CGC...UAGUA G CAAUG AAU CCGAU...GGC-3'@LB@ GAGGA CGUG AGCCUGA GGA@LB@ :|::| |||| ||||||| |||@LB@ UUUUU GCAC UCGGACU CCU@LB@3'-UUU...CCCAG G UAA ACU CUAUU...GUU-5'@LB@ | |@LB@ 124 97@LB@@LB@@LB@Energy -13.66 kcal/mol@LB@Hybridization Energy -22.3129 kcal/mol@LB@Unfolding Energy - mRNA 6.40825 kcal/mol@LB@Unfolding Energy - sRNA 2.25245 kcal/mol@LB@@LB@Position - mRNA 189 -- 216@LB@Position - sRNA 98 -- 123@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 104 -- 110@LB@ |
195 |
0.005273 |
0.1243 |
pa4698 |
N/A |
-10.50 |
0.140691 |
227 -- 236 |
35 -- 44 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________226________237\n_____________|__________|\n5'-CUC...CUGGC__________UUGCU...AAG-3'\n______________CGACCAGUUG\n______________||||||||||\n______________GCUGGUCAAC\n3'-UUU...AGAGC__________UCACU...GUU-5'\n_____________|__________|\n_____________45_________34\n |
230 -- 236 |
35 -- 41 |
-16.2278 kcal/mol |
3.48351 kcal/mol |
2.24737 kcal/mol |
226 237@LB@ | |@LB@5'-CUC...CUGGC UUGCU...AAG-3'@LB@ CGACCAGUUG@LB@ ||||||||||@LB@ GCUGGUCAAC@LB@3'-UUU...AGAGC UCACU...GUU-5'@LB@ | |@LB@ 45 34@LB@@LB@@LB@Energy -10.50 kcal/mol@LB@Hybridization Energy -16.2278 kcal/mol@LB@Unfolding Energy - mRNA 3.48351 kcal/mol@LB@Unfolding Energy - sRNA 2.24737 kcal/mol@LB@@LB@Position - mRNA 227 -- 236@LB@Position - sRNA 35 -- 44@LB@Position Seed - mRNA 230 -- 236@LB@Position Seed - sRNA 35 -- 41@LB@ |
197 |
0.005405 |
0.1261 |
pa2580 |
N/A |
-16.79 |
0.002834 |
13 -- 30 |
70 -- 88 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________12__________________31\n_____________|___________________|\n5'-GUG...UCAUC___________________GGCGC...ACC-3'\n______________GAGGG_CUGGCUGCGUGGG\n______________:||:|_|:|:|||||||||\n______________UUCUC_GGCUGACGCACCC\n3'-UUU...UAGAC_____A_____________AGAGA...GUU-5'\n_____________|___________________|\n_____________89__________________69\n |
24 -- 30 |
70 -- 76 |
-30.7983 kcal/mol |
8.14478 kcal/mol |
5.86376 kcal/mol |
12 31@LB@ | |@LB@5'-GUG...UCAUC GGCGC...ACC-3'@LB@ GAGGG CUGGCUGCGUGGG@LB@ :||:| |:|:|||||||||@LB@ UUCUC GGCUGACGCACCC@LB@3'-UUU...UAGAC A AGAGA...GUU-5'@LB@ | |@LB@ 89 69@LB@@LB@@LB@Energy -16.79 kcal/mol@LB@Hybridization Energy -30.7983 kcal/mol@LB@Unfolding Energy - mRNA 8.14478 kcal/mol@LB@Unfolding Energy - sRNA 5.86376 kcal/mol@LB@@LB@Position - mRNA 13 -- 30@LB@Position - sRNA 70 -- 88@LB@Position Seed - mRNA 24 -- 30@LB@Position Seed - sRNA 70 -- 76@LB@ |
198 |
0.005468 |
0.1268 |
pa5463 |
N/A |
-11.00 |
0.109950 |
289 -- 298 |
38 -- 47 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________288________299\n_____________|__________|\n5'-GUU...GGUGG__________CA-3'\n______________UCGCGACCAG\n______________||||||||||\n______________AGCGCUGGUC\n3'-UUU...ACUAG__________AACUC...GUU-5'\n_____________|__________|\n_____________48_________37\n |
292 -- 298 |
38 -- 44 |
-19.1199 kcal/mol |
4.44679 kcal/mol |
3.68214 kcal/mol |
288 299@LB@ | |@LB@5'-GUU...GGUGG CA-3'@LB@ UCGCGACCAG@LB@ ||||||||||@LB@ AGCGCUGGUC@LB@3'-UUU...ACUAG AACUC...GUU-5'@LB@ | |@LB@ 48 37@LB@@LB@@LB@Energy -11.00 kcal/mol@LB@Hybridization Energy -19.1199 kcal/mol@LB@Unfolding Energy - mRNA 4.44679 kcal/mol@LB@Unfolding Energy - sRNA 3.68214 kcal/mol@LB@@LB@Position - mRNA 289 -- 298@LB@Position - sRNA 38 -- 47@LB@Position Seed - mRNA 292 -- 298@LB@Position Seed - sRNA 38 -- 44@LB@ |
200 |
0.005522 |
0.1269 |
pa1052 |
N/A |
-14.49 |
0.014391 |
203 -- 224 |
103 -- 123 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________202____________________225\n_____________|______________________|\n5'-AUG...CUGAU______________CU______UCGUU...AGG-3'\n______________GAAAAUCGUGAUUG__CCUGAU\n______________:||||:|||||||:__||||||\n______________UUUUUGGCACUAAU__GGACUA\n3'-UUU...CCCAG______________C_______CUCCU...GUU-5'\n_____________|______________________|\n_____________124____________________102\n |
210 -- 216 |
110 -- 116 |
-22.3823 kcal/mol |
5.65319 kcal/mol |
2.24344 kcal/mol |
202 225@LB@ | |@LB@5'-AUG...CUGAU CU UCGUU...AGG-3'@LB@ GAAAAUCGUGAUUG CCUGAU@LB@ :||||:|||||||: ||||||@LB@ UUUUUGGCACUAAU GGACUA@LB@3'-UUU...CCCAG C CUCCU...GUU-5'@LB@ | |@LB@ 124 102@LB@@LB@@LB@Energy -14.49 kcal/mol@LB@Hybridization Energy -22.3823 kcal/mol@LB@Unfolding Energy - mRNA 5.65319 kcal/mol@LB@Unfolding Energy - sRNA 2.24344 kcal/mol@LB@@LB@Position - mRNA 203 -- 224@LB@Position - sRNA 103 -- 123@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 110 -- 116@LB@ |
20 |
4.966e-05 |
0.01105 |
pa5388 |
N/A |
-18.86 |
0.000517 |
168 -- 251 |
37 -- 123 |
'Product name confidence: class 4:Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences.' |
pa3236 pa0030 pa5378 |
_____________167________________________________________________________________________________________252\n_____________|__________________________________________________________________________________________|\n5'-GGG...CGCAG______AAUCAA_____GCAC_______GACCGA______CGA________CCAG_____G____GC___CU__________________GGCGC...UGG-3'\n______________AAAAAC______UAGCC____GAGGGGA______UGAAGA___CGAUU_CG_______CU_GGCU__GCC__GCUGAUC_C_UGGCCAGU\n______________||||||______|||||____||||:||______||||||___|||:|_||_______||_:|||__:||__|||||||_|_:|:|||||\n______________UUUUUG______AUCGG____CUCCUCU______ACUUCU___GCUGA_GC_______GA_UCGA__UGG__CGACUAG_G_GCUGGUCA\n3'-UUU...CCCAG______GCACUA_____ACUA_______AUUAG_______CAG_____C__ACCCAGA__G____A____C________A_C________ACUCA...GUU-5'\n_____________|__________________________________________________________________________________________|\n_____________124________________________________________________________________________________________36\n |
245 -- 251 |
37 -- 43 |
-69.2339 kcal/mol |
26.9773 kcal/mol |
23.4067 kcal/mol |
167 252@LB@ | |@LB@5'-GGG...CGCAG AAUCAA GCAC GACCGA CGA CCAG G GC CU GGCGC...UGG-3'@LB@ AAAAAC UAGCC GAGGGGA UGAAGA CGAUU CG CU GGCU GCC GCUGAUC C UGGCCAGU@LB@ |||||| ||||| ||||:|| |||||| |||:| || || :||| :|| ||||||| | :|:|||||@LB@ UUUUUG AUCGG CUCCUCU ACUUCU GCUGA GC GA UCGA UGG CGACUAG G GCUGGUCA@LB@3'-UUU...CCCAG GCACUA ACUA AUUAG CAG C ACCCAGA G A C A C ACUCA...GUU-5'@LB@ | |@LB@ 124 36@LB@@LB@@LB@Energy -18.86 kcal/mol@LB@Hybridization Energy -69.2339 kcal/mol@LB@Unfolding Energy - mRNA 26.9773 kcal/mol@LB@Unfolding Energy - sRNA 23.4067 kcal/mol@LB@@LB@Position - mRNA 168 -- 251@LB@Position - sRNA 37 -- 123@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 37 -- 43@LB@ |
94 |
0.001308 |
0.06355 |
pa1587 |
lpdG |
-9.92 |
0.185926 |
282 -- 296 |
75 -- 91 |
2-oxoglutarate dehydrogenase complex dihydrolipoyl dehydrogenase |
|
_____________281_______________297\n_____________|_________________|\n5'-GUG...UGGGC____________C____AUCG-3'\n______________CUGAAGA__CCG_CUGC\n______________|||||||__|||_||||\n______________GACUUCU__GGC_GACG\n3'-UUU...UAUUA_______CA___U____CACCC...GUU-5'\n_____________|_________________|\n_____________92________________74\n |
282 -- 288 |
85 -- 91 |
-18.2743 kcal/mol |
2.47066 kcal/mol |
5.88668 kcal/mol |
281 297@LB@ | |@LB@5'-GUG...UGGGC C AUCG-3'@LB@ CUGAAGA CCG CUGC@LB@ ||||||| ||| ||||@LB@ GACUUCU GGC GACG@LB@3'-UUU...UAUUA CA U CACCC...GUU-5'@LB@ | |@LB@ 92 74@LB@@LB@@LB@Energy -9.92 kcal/mol@LB@Hybridization Energy -18.2743 kcal/mol@LB@Unfolding Energy - mRNA 2.47066 kcal/mol@LB@Unfolding Energy - sRNA 5.88668 kcal/mol@LB@@LB@Position - mRNA 282 -- 296@LB@Position - sRNA 75 -- 91@LB@Position Seed - mRNA 282 -- 288@LB@Position Seed - sRNA 85 -- 91@LB@ |