| 92 |
0.01497 |
0.5059 |
b1902 |
ftnB |
-10.62 |
0.072498 |
12 -- 36 |
1 -- 25 |
ferritin B putative ferrous iron reservoir |
|
_____________11________________________37\n_____________|_________________________|\n5'-UGA...GUAAA____U_____C________UUA___AUUUU...AAC-3'\n______________AAUA_AUAAA_UUGAUGAU___AGC\n______________||||_|||||_||:|||||___|||\n______________UUAU_UAUUU_AAUUACUA___UCG\n3'-UUU...UGCCA____U_____C________CUA___-5'\n_____________|________________________|\n_____________26_______________________1\n |
24 -- 30 |
7 -- 13 |
-13.6335 kcal/mol |
2.89836 kcal/mol |
0.112205 kcal/mol |
11 37@LB@ | |@LB@5'-UGA...GUAAA U C UUA AUUUU...AAC-3'@LB@ AAUA AUAAA UUGAUGAU AGC@LB@ |||| ||||| ||:||||| |||@LB@ UUAU UAUUU AAUUACUA UCG@LB@3'-UUU...UGCCA U C CUA -5'@LB@ | |@LB@ 26 1@LB@@LB@@LB@Energy -10.62 kcal/mol@LB@Hybridization Energy -13.6335 kcal/mol@LB@Unfolding Energy - mRNA 2.89836 kcal/mol@LB@Unfolding Energy - sRNA 0.112205 kcal/mol@LB@@LB@Position - mRNA 12 -- 36@LB@Position - sRNA 1 -- 25@LB@Position Seed - mRNA 24 -- 30@LB@Position Seed - sRNA 7 -- 13@LB@ |
| 151 |
0.02491 |
0.526 |
b3575 |
yiaK |
-7.81 |
0.245984 |
13 -- 22 |
1 -- 10 |
2 3-diketo-L-gulonate reductase NADH-dependent |
|
_____________12_________23\n_____________|__________|\n5'-UUU...CGUCC__________GCAAA...UCG-3'\n______________UGAUGGUAGC\n______________|||||:||||\n______________ACUACUAUCG\n3'-UUU...CAAUU__________-5'\n_____________|_________|\n_____________11________1\n |
16 -- 22 |
1 -- 7 |
-14.2362 kcal/mol |
6.39652 kcal/mol |
0.0255427 kcal/mol |
12 23@LB@ | |@LB@5'-UUU...CGUCC GCAAA...UCG-3'@LB@ UGAUGGUAGC@LB@ |||||:||||@LB@ ACUACUAUCG@LB@3'-UUU...CAAUU -5'@LB@ | |@LB@ 11 1@LB@@LB@@LB@Energy -7.81 kcal/mol@LB@Hybridization Energy -14.2362 kcal/mol@LB@Unfolding Energy - mRNA 6.39652 kcal/mol@LB@Unfolding Energy - sRNA 0.0255427 kcal/mol@LB@@LB@Position - mRNA 13 -- 22@LB@Position - sRNA 1 -- 10@LB@Position Seed - mRNA 16 -- 22@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 8 |
0.0001978 |
0.08119 |
b3391 |
hofQ |
-22.13 |
0.000045 |
16 -- 73 |
27 -- 88 |
DNA catabolic putative fimbrial transporter |
|
_____________15________________________________________________________________74\n_____________|_________________________________________________________________|\n5'-CUA...AUGGU___G__________C_____AU____GU_____AA____________AA_________C______GUGCA...UAG-3'\n______________AGG_CGAG_GCGAG_GCAUC__CGGU___AAUA_____AGACGGGCA___AGAAAUGG__GACGG\n______________|::_|||:_|||||_|||||__||||___||||_____|:||:|:||___|||||||:__|||||\n______________UUU_GCUU_CGCUC_CGUAG__GCCA___UUAU_____UUUGUCUGU___UCUUUACU__CUGCC\n______3'-UUUUU___G____A_________________ACU____CCCCA_________AAG________UA_____AUUAU...UCG-5'\n_____________|_________________________________________________________________|\n_____________89________________________________________________________________26\n |
60 -- 66 |
35 -- 41 |
-51.8767 kcal/mol |
10.3742 kcal/mol |
19.3742 kcal/mol |
15 74@LB@ | |@LB@5'-CUA...AUGGU G C AU GU AA AA C GUGCA...UAG-3'@LB@ AGG CGAG GCGAG GCAUC CGGU AAUA AGACGGGCA AGAAAUGG GACGG@LB@ |:: |||: ||||| ||||| |||| |||| |:||:|:|| |||||||: |||||@LB@ UUU GCUU CGCUC CGUAG GCCA UUAU UUUGUCUGU UCUUUACU CUGCC@LB@ 3'-UUUUU G A ACU CCCCA AAG UA AUUAU...UCG-5'@LB@ | |@LB@ 89 26@LB@@LB@@LB@Energy -22.13 kcal/mol@LB@Hybridization Energy -51.8767 kcal/mol@LB@Unfolding Energy - mRNA 10.3742 kcal/mol@LB@Unfolding Energy - sRNA 19.3742 kcal/mol@LB@@LB@Position - mRNA 16 -- 73@LB@Position - sRNA 27 -- 88@LB@Position Seed - mRNA 60 -- 66@LB@Position Seed - sRNA 35 -- 41@LB@ |
| 76 |
0.01084 |
0.4523 |
b3990 |
thiH |
-9.70 |
0.111440 |
16 -- 25 |
55 -- 64 |
tyrosine lyase involved in thiamine-thiazole moiety synthesis |
|
_____________15_________26\n_____________|__________|\n5'-GCC...CGCUG__________CCGAC...AUG-3'\n______________GAAAUGGGGG\n______________|||||:||||\n______________CUUUAUCCCC\n3'-UUU...GCCAA__________AUUUG...UCG-5'\n_____________|__________|\n_____________65_________54\n |
19 -- 25 |
55 -- 61 |
-15.2995 kcal/mol |
5.57445 kcal/mol |
0.0291912 kcal/mol |
15 26@LB@ | |@LB@5'-GCC...CGCUG CCGAC...AUG-3'@LB@ GAAAUGGGGG@LB@ |||||:||||@LB@ CUUUAUCCCC@LB@3'-UUU...GCCAA AUUUG...UCG-5'@LB@ | |@LB@ 65 54@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -15.2995 kcal/mol@LB@Unfolding Energy - mRNA 5.57445 kcal/mol@LB@Unfolding Energy - sRNA 0.0291912 kcal/mol@LB@@LB@Position - mRNA 16 -- 25@LB@Position - sRNA 55 -- 64@LB@Position Seed - mRNA 19 -- 25@LB@Position Seed - sRNA 55 -- 61@LB@ |
| 197 |
0.03325 |
0.554 |
b4139 |
aspA |
-12.92 |
0.022631 |
26 -- 66 |
25 -- 59 |
aspartate ammonia-lyase |
|
_____________25_________________________________________67\n_____________|__________________________________________|\n5'-GAU...AAUUA________AA__C____C__________UCCAG__U______GAAAU...ACU-3'\n______________AGGGGUAA__AC_GACA_UUA_AAGUGA_____AU_ACGGUA\n______________||||||||__||_||||_|:|_||:|||_____||_||||||\n______________UCCCCAUU__UG_CUGU_AGU_UUUACU_____UA_UGCCAU\n3'-UUU...CUUUA____________U____A___C_____________C______UAUUU...UCG-5'\n_____________|__________________________________________|\n_____________60_________________________________________24\n |
27 -- 33 |
52 -- 58 |
-28.0294 kcal/mol |
8.80617 kcal/mol |
6.29893 kcal/mol |
25 67@LB@ | |@LB@5'-GAU...AAUUA AA C C UCCAG U GAAAU...ACU-3'@LB@ AGGGGUAA AC GACA UUA AAGUGA AU ACGGUA@LB@ |||||||| || |||| |:| ||:||| || ||||||@LB@ UCCCCAUU UG CUGU AGU UUUACU UA UGCCAU@LB@3'-UUU...CUUUA U A C C UAUUU...UCG-5'@LB@ | |@LB@ 60 24@LB@@LB@@LB@Energy -12.92 kcal/mol@LB@Hybridization Energy -28.0294 kcal/mol@LB@Unfolding Energy - mRNA 8.80617 kcal/mol@LB@Unfolding Energy - sRNA 6.29893 kcal/mol@LB@@LB@Position - mRNA 26 -- 66@LB@Position - sRNA 25 -- 59@LB@Position Seed - mRNA 27 -- 33@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 186 |
0.03152 |
0.5492 |
b0922 |
mukF |
-11.29 |
0.052395 |
27 -- 43 |
42 -- 57 |
chromosome condensin MukBEF kleisin-like subunit binds calcium |
|
_____________26________________44\n_____________|_________________|\n5'-CUG...AUUAU____A____________GCGUG...UGG-3'\n______________GGGU_AGACAGGCGUUC\n______________||||_|:||||:|:|||\n______________CCCA_UUUGUCUGUAAG\n3'-UUU...UUAUC_________________UCUUU...UCG-5'\n_____________|_________________|\n_____________58________________41\n |
33 -- 39 |
46 -- 52 |
-21.5353 kcal/mol |
3.99758 kcal/mol |
6.24533 kcal/mol |
26 44@LB@ | |@LB@5'-CUG...AUUAU A GCGUG...UGG-3'@LB@ GGGU AGACAGGCGUUC@LB@ |||| |:||||:|:|||@LB@ CCCA UUUGUCUGUAAG@LB@3'-UUU...UUAUC UCUUU...UCG-5'@LB@ | |@LB@ 58 41@LB@@LB@@LB@Energy -11.29 kcal/mol@LB@Hybridization Energy -21.5353 kcal/mol@LB@Unfolding Energy - mRNA 3.99758 kcal/mol@LB@Unfolding Energy - sRNA 6.24533 kcal/mol@LB@@LB@Position - mRNA 27 -- 43@LB@Position - sRNA 42 -- 57@LB@Position Seed - mRNA 33 -- 39@LB@Position Seed - sRNA 46 -- 52@LB@ |
| 128 |
0.0201 |
0.5155 |
b2782 |
mazF |
-10.78 |
0.067406 |
32 -- 50 |
1 -- 23 |
mRNA interferase toxin antitoxin is MazE |
b4225 |
_____________31______________________51\n_____________|_______________________|\n5'-AUC...CAAUC_______________________GAAGA...UCC-3'\n______________UGAAUA___UUGAUGAUGA_AGU\n______________|:||||___||:|||||||_||:\n______________AUUUAU___AAUUACUACU_UCG\n3'-UUU...CCAUU______UUC__________A___-5'\n_____________|______________________|\n_____________24_____________________1\n |
41 -- 47 |
5 -- 11 |
-13.6359 kcal/mol |
2.75565 kcal/mol |
0.105066 kcal/mol |
31 51@LB@ | |@LB@5'-AUC...CAAUC GAAGA...UCC-3'@LB@ UGAAUA UUGAUGAUGA AGU@LB@ |:|||| ||:||||||| ||:@LB@ AUUUAU AAUUACUACU UCG@LB@3'-UUU...CCAUU UUC A -5'@LB@ | |@LB@ 24 1@LB@@LB@@LB@Energy -10.78 kcal/mol@LB@Hybridization Energy -13.6359 kcal/mol@LB@Unfolding Energy - mRNA 2.75565 kcal/mol@LB@Unfolding Energy - sRNA 0.105066 kcal/mol@LB@@LB@Position - mRNA 32 -- 50@LB@Position - sRNA 1 -- 23@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 5 -- 11@LB@ |
| 68 |
0.00983 |
0.4523 |
b1321 |
ycjX |
-10.80 |
0.066674 |
34 -- 41 |
55 -- 62 |
DUF463 family protein puatative P-loop NTPase |
|
_____________33_______42\n_____________|________|\n5'-UGA...UAAAU________ACAUA...CAG-3'\n______________AGUAGGGG\n______________|:||||||\n______________UUAUCCCC\n3'-UUU...CAACU________AUUUG...UCG-5'\n_____________|________|\n_____________63_______54\n |
35 -- 41 |
55 -- 61 |
-12.2037 kcal/mol |
1.3787 kcal/mol |
0.0270923 kcal/mol |
33 42@LB@ | |@LB@5'-UGA...UAAAU ACAUA...CAG-3'@LB@ AGUAGGGG@LB@ |:||||||@LB@ UUAUCCCC@LB@3'-UUU...CAACU AUUUG...UCG-5'@LB@ | |@LB@ 63 54@LB@@LB@@LB@Energy -10.80 kcal/mol@LB@Hybridization Energy -12.2037 kcal/mol@LB@Unfolding Energy - mRNA 1.3787 kcal/mol@LB@Unfolding Energy - sRNA 0.0270923 kcal/mol@LB@@LB@Position - mRNA 34 -- 41@LB@Position - sRNA 55 -- 62@LB@Position Seed - mRNA 35 -- 41@LB@Position Seed - sRNA 55 -- 61@LB@ |
| 180 |
0.02979 |
0.5424 |
b4217 |
ytfK |
-6.46 |
0.400721 |
35 -- 83 |
12 -- 56 |
DUF1107 family protein |
|
_____________34_____________________________________________________84\n_____________|______________________________________________________|\n5'-GAA...GCUUC______A____A______________A__U___ACCUUUAG_____A_______UACGC...AAU-3'\n______________GGUAAA_AGAU_AUUC_____UGAAU_AU_GUA________GUAAA_AAAGUUA\n______________||||||_|||:_||||_____|||||_|:_|||________:||||_|||||||\n______________CCAUUU_UCUG_UAAG_____ACUUA_UG_CAU________UAUUU_UUUCAAU\n3'-UUU...UAUCC______G_________UCUUU_____C__C________________A_______UACUA...UCG-5'\n_____________|______________________________________________________|\n_____________57_____________________________________________________11\n |
77 -- 83 |
12 -- 18 |
-20.0112 kcal/mol |
7.22293 kcal/mol |
6.33232 kcal/mol |
34 84@LB@ | |@LB@5'-GAA...GCUUC A A A U ACCUUUAG A UACGC...AAU-3'@LB@ GGUAAA AGAU AUUC UGAAU AU GUA GUAAA AAAGUUA@LB@ |||||| |||: |||| ||||| |: ||| :|||| |||||||@LB@ CCAUUU UCUG UAAG ACUUA UG CAU UAUUU UUUCAAU@LB@3'-UUU...UAUCC G UCUUU C C A UACUA...UCG-5'@LB@ | |@LB@ 57 11@LB@@LB@@LB@Energy -6.46 kcal/mol@LB@Hybridization Energy -20.0112 kcal/mol@LB@Unfolding Energy - mRNA 7.22293 kcal/mol@LB@Unfolding Energy - sRNA 6.33232 kcal/mol@LB@@LB@Position - mRNA 35 -- 83@LB@Position - sRNA 12 -- 56@LB@Position Seed - mRNA 77 -- 83@LB@Position Seed - sRNA 12 -- 18@LB@ |
| 184 |
0.03077 |
0.549 |
b1101 |
ptsG |
-13.95 |
0.012872 |
39 -- 58 |
1 -- 19 |
fused glucose-specific PTS enzymes: IIB component/IIC component |
|
_____________38___________________59\n_____________|____________________|\n5'-CAU...UGAUC_________AAC________CGUCA...GUU-3'\n______________UGAAGUUGA___GUGAUAGC\n______________|:|||||:|___:|||||||\n______________AUUUCAAUU___UACUAUCG\n3'-UUU...UAUUU_________AC_________-5'\n_____________|___________________|\n_____________20__________________1\n |
52 -- 58 |
1 -- 7 |
-17.415 kcal/mol |
3.39679 kcal/mol |
0.0638423 kcal/mol |
38 59@LB@ | |@LB@5'-CAU...UGAUC AAC CGUCA...GUU-3'@LB@ UGAAGUUGA GUGAUAGC@LB@ |:|||||:| :|||||||@LB@ AUUUCAAUU UACUAUCG@LB@3'-UUU...UAUUU AC -5'@LB@ | |@LB@ 20 1@LB@@LB@@LB@Energy -13.95 kcal/mol@LB@Hybridization Energy -17.415 kcal/mol@LB@Unfolding Energy - mRNA 3.39679 kcal/mol@LB@Unfolding Energy - sRNA 0.0638423 kcal/mol@LB@@LB@Position - mRNA 39 -- 58@LB@Position - sRNA 1 -- 19@LB@Position Seed - mRNA 52 -- 58@LB@Position Seed - sRNA 1 -- 7@LB@ |
