| 75 |
0.007199 |
0.3134 |
b2167 |
fruA |
-15.16 |
0.026023 |
90 -- 122 |
43 -- 84 |
fused fructose-specific PTS enzymes: IIBcomponent/IIC components |
|
_____________89_________________________________________123\n_____________|__________________________________________|\n5'-CGC...UGUUG____________________CA____________________UUACC...AAA-3'\n______________CAGC_CCUGGC_GG_UAAGU________AAGCAAUGUGGGUA\n______________||||_||:|||_||_|||||________||||||||||:|:|\n______________GUCG_GGGCCG_CC_AUUCA________UUCGUUACACUCGU\n_____3'-UUUUCG____U______A__G_____UUAUGACC______________UACAG...GCG-5'\n_____________|__________________________________________|\n_____________85_________________________________________42\n |
116 -- 122 |
43 -- 49 |
-41.7817 kcal/mol |
11.7261 kcal/mol |
14.8963 kcal/mol |
89 123@LB@ | |@LB@5'-CGC...UGUUG CA UUACC...AAA-3'@LB@ CAGC CCUGGC GG UAAGU AAGCAAUGUGGGUA@LB@ |||| ||:||| || ||||| ||||||||||:|:|@LB@ GUCG GGGCCG CC AUUCA UUCGUUACACUCGU@LB@ 3'-UUUUCG U A G UUAUGACC UACAG...GCG-5'@LB@ | |@LB@ 85 42@LB@@LB@@LB@Energy -15.16 kcal/mol@LB@Hybridization Energy -41.7817 kcal/mol@LB@Unfolding Energy - mRNA 11.7261 kcal/mol@LB@Unfolding Energy - sRNA 14.8963 kcal/mol@LB@@LB@Position - mRNA 90 -- 122@LB@Position - sRNA 43 -- 84@LB@Position Seed - mRNA 116 -- 122@LB@Position Seed - sRNA 43 -- 49@LB@ |
| 118 |
0.01263 |
0.3585 |
b0890 |
ftsK |
-8.12 |
0.357469 |
20 -- 46 |
38 -- 59 |
DNA translocase at septal ring sorting daughter chromsomes |
|
_____________19__________________________47\n_____________|___________________________|\n5'-ACA...UGUUA______AAGU___GCA_______C___UGGUU...UUG-3'\n______________UGGAAG____CAA___GAGUAAU_GUC\n______________||||||____|||___|||:|||_|||\n______________ACCUUC____GUU___CUCGUUA_CAG\n3'-UUU...UUAUG_____________ACA___________CACGA...GCG-5'\n_____________|___________________________|\n_____________60__________________________37\n |
36 -- 42 |
41 -- 47 |
-18.6025 kcal/mol |
7.19996 kcal/mol |
3.27871 kcal/mol |
19 47@LB@ | |@LB@5'-ACA...UGUUA AAGU GCA C UGGUU...UUG-3'@LB@ UGGAAG CAA GAGUAAU GUC@LB@ |||||| ||| |||:||| |||@LB@ ACCUUC GUU CUCGUUA CAG@LB@3'-UUU...UUAUG ACA CACGA...GCG-5'@LB@ | |@LB@ 60 37@LB@@LB@@LB@Energy -8.12 kcal/mol@LB@Hybridization Energy -18.6025 kcal/mol@LB@Unfolding Energy - mRNA 7.19996 kcal/mol@LB@Unfolding Energy - sRNA 3.27871 kcal/mol@LB@@LB@Position - mRNA 20 -- 46@LB@Position - sRNA 38 -- 59@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 70 |
0.006078 |
0.2917 |
b1612 |
fumA |
-11.08 |
0.126554 |
60 -- 88 |
36 -- 58 |
fumarate hydratase (fumarase A) aerobic Class I |
|
_____________59_____________________________89\n_____________|______________________________|\n5'-AUG...CUACG________CC_______CGCAA__A_____ACUAG...AAU-3'\n______________GGAAGUAA__UG_GAGC_____AA_GUCGU\n______________|||||:||__||_||||_____||_|||||\n______________CCUUCGUU__AC_CUCG_____UU_CAGCA\n3'-UUU...UAUGA____________A___________A_____CGAAA...GCG-5'\n_____________|______________________________|\n_____________59_____________________________35\n |
61 -- 67 |
51 -- 57 |
-19.4215 kcal/mol |
5.11518 kcal/mol |
3.22706 kcal/mol |
59 89@LB@ | |@LB@5'-AUG...CUACG CC CGCAA A ACUAG...AAU-3'@LB@ GGAAGUAA UG GAGC AA GUCGU@LB@ |||||:|| || |||| || |||||@LB@ CCUUCGUU AC CUCG UU CAGCA@LB@3'-UUU...UAUGA A A CGAAA...GCG-5'@LB@ | |@LB@ 59 35@LB@@LB@@LB@Energy -11.08 kcal/mol@LB@Hybridization Energy -19.4215 kcal/mol@LB@Unfolding Energy - mRNA 5.11518 kcal/mol@LB@Unfolding Energy - sRNA 3.22706 kcal/mol@LB@@LB@Position - mRNA 60 -- 88@LB@Position - sRNA 36 -- 58@LB@Position Seed - mRNA 61 -- 67@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 52 |
0.004779 |
0.2905 |
b4122 |
fumB |
-12.31 |
0.079331 |
182 -- 204 |
48 -- 68 |
anaerobic class I fumarate hydratase (fumarase B) |
|
_____________181_____________________205\n_____________|_______________________|\n5'-UCC...AUACA____UACAG_________U____CAAAC...ACU-3'\n______________GAGU_____GCUGGAAGC_AUGU\n______________:|||_____:||||||||_||||\n______________UUCA_____UGACCUUCG_UACA\n3'-UUU...ACCGA____UUA___________U____CUCGU...GCG-5'\n_____________|_______________________|\n_____________69______________________47\n |
193 -- 199 |
53 -- 59 |
-20.6346 kcal/mol |
5.29507 kcal/mol |
3.03052 kcal/mol |
181 205@LB@ | |@LB@5'-UCC...AUACA UACAG U CAAAC...ACU-3'@LB@ GAGU GCUGGAAGC AUGU@LB@ :||| :|||||||| ||||@LB@ UUCA UGACCUUCG UACA@LB@3'-UUU...ACCGA UUA U CUCGU...GCG-5'@LB@ | |@LB@ 69 47@LB@@LB@@LB@Energy -12.31 kcal/mol@LB@Hybridization Energy -20.6346 kcal/mol@LB@Unfolding Energy - mRNA 5.29507 kcal/mol@LB@Unfolding Energy - sRNA 3.03052 kcal/mol@LB@@LB@Position - mRNA 182 -- 204@LB@Position - sRNA 48 -- 68@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 53 -- 59@LB@ |
| 146 |
0.01749 |
0.3998 |
b1611 |
fumC |
-5.84 |
0.669018 |
232 -- 244 |
46 -- 59 |
fumarate hydratase (fumarase C) aerobic Class II |
|
_____________231____________245\n_____________|______________|\n5'-AGG...UUCGA______________UGUCC...UCC-3'\n______________UGGGGGCGAU_UGA\n______________|||::||:||_|||\n______________ACCUUCGUUA_ACU\n3'-UUU...UUAUG__________C___CGUUA...GCG-5'\n_____________|______________|\n_____________60_____________45\n |
233 -- 239 |
52 -- 58 |
-14.3864 kcal/mol |
5.35896 kcal/mol |
3.18972 kcal/mol |
231 245@LB@ | |@LB@5'-AGG...UUCGA UGUCC...UCC-3'@LB@ UGGGGGCGAU UGA@LB@ |||::||:|| |||@LB@ ACCUUCGUUA ACU@LB@3'-UUU...UUAUG C CGUUA...GCG-5'@LB@ | |@LB@ 60 45@LB@@LB@@LB@Energy -5.84 kcal/mol@LB@Hybridization Energy -14.3864 kcal/mol@LB@Unfolding Energy - mRNA 5.35896 kcal/mol@LB@Unfolding Energy - sRNA 3.18972 kcal/mol@LB@@LB@Position - mRNA 232 -- 244@LB@Position - sRNA 46 -- 59@LB@Position Seed - mRNA 233 -- 239@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 102 |
0.01034 |
0.3393 |
b3128 |
garD |
-8.06 |
0.364232 |
93 -- 113 |
5 -- 25 |
D-galactarate dehydrogenase |
|
_____________92____________________114\n_____________|_____________________|\n5'-AUA...UCACA________UUUAAAC______CAUUC...UGA-3'\n______________UUUCUGCG_______UCCUGA\n______________|:||:|||_______||||||\n______________AGAGGCGC_______AGGACU\n3'-UUU...GUCCA________UCCCAGA______AGCG-5'\n_____________|_____________________|\n_____________26____________________4\n |
94 -- 100 |
18 -- 24 |
-19.1191 kcal/mol |
3.34271 kcal/mol |
7.71155 kcal/mol |
92 114@LB@ | |@LB@5'-AUA...UCACA UUUAAAC CAUUC...UGA-3'@LB@ UUUCUGCG UCCUGA@LB@ |:||:||| ||||||@LB@ AGAGGCGC AGGACU@LB@3'-UUU...GUCCA UCCCAGA AGCG-5'@LB@ | |@LB@ 26 4@LB@@LB@@LB@Energy -8.06 kcal/mol@LB@Hybridization Energy -19.1191 kcal/mol@LB@Unfolding Energy - mRNA 3.34271 kcal/mol@LB@Unfolding Energy - sRNA 7.71155 kcal/mol@LB@@LB@Position - mRNA 93 -- 113@LB@Position - sRNA 5 -- 25@LB@Position Seed - mRNA 94 -- 100@LB@Position Seed - sRNA 18 -- 24@LB@ |
| 29 |
0.002852 |
0.2776 |
b3779 |
gpp |
-14.27 |
0.036904 |
25 -- 63 |
25 -- 66 |
guanosine pentaphosphatase/exopolyphosphatase |
|
_____________24__________________________________________64\n_____________|___________________________________________|\n5'-GCC...UCCGC__C_______C___UCC___C_____C_______G________AAAUA...UGA-3'\n______________GU_GUACUGG__GC_____G_GUAAU_GUCGU_C_UUCAGGUU\n______________||_:||||||__||_____|_|:|||_|||||_|_||||||||\n______________CA_UAUGACC__CG_____C_CGUUA_CAGCA_G_AAGUCCAA\n3'-UUU...CGAUU__U_______UU__UUACA_U___________C_A________GAGGC...GCG-5'\n_____________|___________________________________________|\n_____________67__________________________________________24\n |
57 -- 63 |
25 -- 31 |
-32.1436 kcal/mol |
9.87719 kcal/mol |
7.99254 kcal/mol |
24 64@LB@ | |@LB@5'-GCC...UCCGC C C UCC C C G AAAUA...UGA-3'@LB@ GU GUACUGG GC G GUAAU GUCGU C UUCAGGUU@LB@ || :|||||| || | |:||| ||||| | ||||||||@LB@ CA UAUGACC CG C CGUUA CAGCA G AAGUCCAA@LB@3'-UUU...CGAUU U UU UUACA U C A GAGGC...GCG-5'@LB@ | |@LB@ 67 24@LB@@LB@@LB@Energy -14.27 kcal/mol@LB@Hybridization Energy -32.1436 kcal/mol@LB@Unfolding Energy - mRNA 9.87719 kcal/mol@LB@Unfolding Energy - sRNA 7.99254 kcal/mol@LB@@LB@Position - mRNA 25 -- 63@LB@Position - sRNA 25 -- 66@LB@Position Seed - mRNA 57 -- 63@LB@Position Seed - sRNA 25 -- 31@LB@ |
| 82 |
0.008223 |
0.3318 |
b1654 |
grxD |
-11.69 |
0.100410 |
189 -- 207 |
43 -- 58 |
glutaredoxin-4 |
|
_____________188_________________208\n_____________|___________________|\n5'-AAA...UUUGA________GACAA______CCACU...CUG-3'\n______________GGAAGCAA_____UGAGCA\n______________||||||||_____||||||\n______________CCUUCGUU_____ACUCGU\n3'-UUU...UAUGA________AC_________UACAG...GCG-5'\n_____________|___________________|\n_____________59__________________42\n |
190 -- 196 |
51 -- 57 |
-19.1647 kcal/mol |
4.26252 kcal/mol |
3.20949 kcal/mol |
188 208@LB@ | |@LB@5'-AAA...UUUGA GACAA CCACU...CUG-3'@LB@ GGAAGCAA UGAGCA@LB@ |||||||| ||||||@LB@ CCUUCGUU ACUCGU@LB@3'-UUU...UAUGA AC UACAG...GCG-5'@LB@ | |@LB@ 59 42@LB@@LB@@LB@Energy -11.69 kcal/mol@LB@Hybridization Energy -19.1647 kcal/mol@LB@Unfolding Energy - mRNA 4.26252 kcal/mol@LB@Unfolding Energy - sRNA 3.20949 kcal/mol@LB@@LB@Position - mRNA 189 -- 207@LB@Position - sRNA 43 -- 58@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 197 |
0.02501 |
0.4226 |
b2947 |
gshB |
-10.62 |
0.150229 |
274 -- 293 |
36 -- 62 |
glutathione synthetase |
|
_____________273_________________________294\n_____________|___________________________|\n5'-UGC...UAUGU_____________________C_____GGUUACG-3'\n______________UGCUGGAAGCA_______CAG_GUCGU\n______________|:|||||||||_______||:_|||||\n______________AUGACCUUCGU_______GUU_CAGCA\n3'-UUU...UCAUU___________UACACUC___A_____CGAAA...GCG-5'\n_____________|___________________________|\n_____________63__________________________35\n |
278 -- 284 |
52 -- 58 |
-23.3786 kcal/mol |
9.45801 kcal/mol |
3.30265 kcal/mol |
273 294@LB@ | |@LB@5'-UGC...UAUGU C GGUUACG-3'@LB@ UGCUGGAAGCA CAG GUCGU@LB@ |:||||||||| ||: |||||@LB@ AUGACCUUCGU GUU CAGCA@LB@3'-UUU...UCAUU UACACUC A CGAAA...GCG-5'@LB@ | |@LB@ 63 35@LB@@LB@@LB@Energy -10.62 kcal/mol@LB@Hybridization Energy -23.3786 kcal/mol@LB@Unfolding Energy - mRNA 9.45801 kcal/mol@LB@Unfolding Energy - sRNA 3.30265 kcal/mol@LB@@LB@Position - mRNA 274 -- 293@LB@Position - sRNA 36 -- 62@LB@Position Seed - mRNA 278 -- 284@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 21 |
0.001761 |
0.2682 |
b2988 |
gss |
-16.20 |
0.017239 |
12 -- 42 |
38 -- 68 |
glutathionylspermidine amidase and glutathionylspermidine synthetase |
|
_____________11________________________________43\n_____________|_________________________________|\n5'-AGU...CUUCU________G__UU____________________ACUUG...UCG-3'\n______________GAGUGGUA_UG__GAAGCAGUGU_AGCAG_GUC\n______________:|||::||_||__||||||:|||_||||:_|||\n______________UUCAUUAU_AC__CUUCGUUACA_UCGUU_CAG\n3'-UUU...ACCGA________G______________C_____A___CACGA...GCG-5'\n_____________|_________________________________|\n_____________69________________________________37\n |
28 -- 34 |
48 -- 54 |
-32.4779 kcal/mol |
12.9749 kcal/mol |
3.30528 kcal/mol |
11 43@LB@ | |@LB@5'-AGU...CUUCU G UU ACUUG...UCG-3'@LB@ GAGUGGUA UG GAAGCAGUGU AGCAG GUC@LB@ :|||::|| || ||||||:||| ||||: |||@LB@ UUCAUUAU AC CUUCGUUACA UCGUU CAG@LB@3'-UUU...ACCGA G C A CACGA...GCG-5'@LB@ | |@LB@ 69 37@LB@@LB@@LB@Energy -16.20 kcal/mol@LB@Hybridization Energy -32.4779 kcal/mol@LB@Unfolding Energy - mRNA 12.9749 kcal/mol@LB@Unfolding Energy - sRNA 3.30528 kcal/mol@LB@@LB@Position - mRNA 12 -- 42@LB@Position - sRNA 38 -- 68@LB@Position Seed - mRNA 28 -- 34@LB@Position Seed - sRNA 48 -- 54@LB@ |
