149 |
0.06369 |
0.3424 |
ct_124 |
accC |
-5.62 |
0.277702 |
171 -- 193 |
17 -- 31 |
acetyl-CoA carboxylase biotin carboxylase subunit |
|
_____________170_____________________194\n_____________|_______________________|\n5'-CUC...GUUCU____________AUAGUUAA___UUAGU...UGG-3'\n______________AAGUUAUUCCGU________GGC\n______________|||:||||||:|________|||\n______________UUCGAUAAGGUA________CCG\n3'-UUU...CAGUC_______________________CAAUC...GAA-5'\n_____________|_______________________|\n_____________32______________________16\n |
176 -- 182 |
20 -- 26 |
-15.1557 kcal/mol |
4.67447 kcal/mol |
4.86101 kcal/mol |
170 194@LB@ | |@LB@5'-CUC...GUUCU AUAGUUAA UUAGU...UGG-3'@LB@ AAGUUAUUCCGU GGC@LB@ |||:||||||:| |||@LB@ UUCGAUAAGGUA CCG@LB@3'-UUU...CAGUC CAAUC...GAA-5'@LB@ | |@LB@ 32 16@LB@@LB@@LB@Energy -5.62 kcal/mol@LB@Hybridization Energy -15.1557 kcal/mol@LB@Unfolding Energy - mRNA 4.67447 kcal/mol@LB@Unfolding Energy - sRNA 4.86101 kcal/mol@LB@@LB@Position - mRNA 171 -- 193@LB@Position - sRNA 17 -- 31@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 20 -- 26@LB@ |
192 |
0.08479 |
0.363 |
ct_293 |
accD |
-5.01 |
0.360945 |
270 -- 276 |
79 -- 85 |
acetyl-CoA carboxylase carboxyltransferase subunit beta |
|
_____________269_____277\n_____________|_______|\n5'-GUA...GUGGC_______AAUGU...UGA-3'\n______________UGGCUAA\n______________:||||||\n______________GCCGAUU\n3'-UUU...UCUAU_______GAGGU...GAA-5'\n_____________|_______|\n_____________86______78\n |
270 -- 276 |
79 -- 85 |
-7.87376 kcal/mol |
1.76808 kcal/mol |
1.09751 kcal/mol |
269 277@LB@ | |@LB@5'-GUA...GUGGC AAUGU...UGA-3'@LB@ UGGCUAA@LB@ :||||||@LB@ GCCGAUU@LB@3'-UUU...UCUAU GAGGU...GAA-5'@LB@ | |@LB@ 86 78@LB@@LB@@LB@Energy -5.01 kcal/mol@LB@Hybridization Energy -7.87376 kcal/mol@LB@Unfolding Energy - mRNA 1.76808 kcal/mol@LB@Unfolding Energy - sRNA 1.09751 kcal/mol@LB@@LB@Position - mRNA 270 -- 276@LB@Position - sRNA 79 -- 85@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 79 -- 85@LB@ |
152 |
0.064 |
0.3424 |
ct_749 |
alaS |
-4.53 |
0.436714 |
274 -- 290 |
41 -- 57 |
alanine--tRNA ligase |
|
_____________273_______________291\n_____________|_________________|\n5'-AAA...AUCUU_______UUUCCC____AAUGA...CUU-3'\n______________CUCCUGU______GCAU\n______________|:|||||______:||:\n______________GGGGACA______UGUG\n3'-UUU...GAAGG_______CAUGUU____AUCUC...GAA-5'\n_____________|_________________|\n_____________58________________40\n |
274 -- 280 |
51 -- 57 |
-13.0187 kcal/mol |
0.670655 kcal/mol |
7.82241 kcal/mol |
273 291@LB@ | |@LB@5'-AAA...AUCUU UUUCCC AAUGA...CUU-3'@LB@ CUCCUGU GCAU@LB@ |:||||| :||:@LB@ GGGGACA UGUG@LB@3'-UUU...GAAGG CAUGUU AUCUC...GAA-5'@LB@ | |@LB@ 58 40@LB@@LB@@LB@Energy -4.53 kcal/mol@LB@Hybridization Energy -13.0187 kcal/mol@LB@Unfolding Energy - mRNA 0.670655 kcal/mol@LB@Unfolding Energy - sRNA 7.82241 kcal/mol@LB@@LB@Position - mRNA 274 -- 290@LB@Position - sRNA 41 -- 57@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 51 -- 57@LB@ |
68 |
0.02545 |
0.29 |
ct_369 |
aroB |
-8.93 |
0.051509 |
264 -- 292 |
1 -- 31 |
3-dehydroquinate synthase |
|
_____________263_____________________________293\n_____________|_______________________________|\n5'-GGC...ACCCU_________GCUU_______UC_________CCCUCUCA-3'\n______________AAGCUGUUU_____CGUU_G__UACCGACUU\n______________|||||:||:_____||||_|__||||:||||\n______________UUCGAUAAG_____GCAA_C__AUGGUUGAA\n3'-UUU...CAGUC_________GUACC____U_UU_________-5'\n_____________|______________________________|\n_____________32_____________________________1\n |
286 -- 292 |
1 -- 7 |
-23.4181 kcal/mol |
6.00993 kcal/mol |
8.47514 kcal/mol |
263 293@LB@ | |@LB@5'-GGC...ACCCU GCUU UC CCCUCUCA-3'@LB@ AAGCUGUUU CGUU G UACCGACUU@LB@ |||||:||: |||| | ||||:||||@LB@ UUCGAUAAG GCAA C AUGGUUGAA@LB@3'-UUU...CAGUC GUACC U UU -5'@LB@ | |@LB@ 32 1@LB@@LB@@LB@Energy -8.93 kcal/mol@LB@Hybridization Energy -23.4181 kcal/mol@LB@Unfolding Energy - mRNA 6.00993 kcal/mol@LB@Unfolding Energy - sRNA 8.47514 kcal/mol@LB@@LB@Position - mRNA 264 -- 292@LB@Position - sRNA 1 -- 31@LB@Position Seed - mRNA 286 -- 292@LB@Position Seed - sRNA 1 -- 7@LB@ |
103 |
0.03832 |
0.3036 |
ct_382 |
aroG |
-9.59 |
0.035559 |
138 -- 150 |
48 -- 60 |
3-deoxy-7-phosphoheptulonate synthase |
|
_____________137___________151\n_____________|_____________|\n5'-UUU...UUUUC_____________UAUGA...CUA-3'\n______________UCUUCCCUGUGUG\n______________||::||||||||:\n______________AGGGGGGACACAU\n3'-UUU...ACUGA_____________GUUUG...GAA-5'\n_____________|_____________|\n_____________61____________47\n |
144 -- 150 |
48 -- 54 |
-20.2814 kcal/mol |
1.44568 kcal/mol |
9.24642 kcal/mol |
137 151@LB@ | |@LB@5'-UUU...UUUUC UAUGA...CUA-3'@LB@ UCUUCCCUGUGUG@LB@ ||::||||||||:@LB@ AGGGGGGACACAU@LB@3'-UUU...ACUGA GUUUG...GAA-5'@LB@ | |@LB@ 61 47@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -20.2814 kcal/mol@LB@Unfolding Energy - mRNA 1.44568 kcal/mol@LB@Unfolding Energy - sRNA 9.24642 kcal/mol@LB@@LB@Position - mRNA 138 -- 150@LB@Position - sRNA 48 -- 60@LB@Position Seed - mRNA 144 -- 150@LB@Position Seed - sRNA 48 -- 54@LB@ |
10 |
0.001873 |
0.154 |
ct_367 |
aroL |
-15.55 |
0.000817 |
132 -- 208 |
3 -- 59 |
shikimate kinase |
|
_____________131_______________________________________________________________________________209\n_____________|_________________________________________________________________________________|\n5'-UGU...ACAAA_______CUGUAACACACA___________________UUCCA__________AUUGCA___C____CACUAC________GUUCG...UGC-3'\n______________CCCUCCU____________GUGUAUAAAUA__AGAGUU______UAUUUCGUG______GCG__AGA______AUGCCAAC\n______________|||:|||____________|||||:|||:|__|||||:______||||:|:||______|||__|||______||:|||||\n______________GGGGGGA____________CACAUGUUUGU__UCUCAG______AUAAGGUAC______CGC__UCU______UAUGGUUG\n3'-UUU...CUGAA______________________________GA______UCUUCG__________________AA_________________AA-5'\n_____________|_________________________________________________________________________________|\n_____________60________________________________________________________________________________2\n |
202 -- 208 |
3 -- 9 |
-46.252 kcal/mol |
13.1534 kcal/mol |
17.5467 kcal/mol |
131 209@LB@ | |@LB@5'-UGU...ACAAA CUGUAACACACA UUCCA AUUGCA C CACUAC GUUCG...UGC-3'@LB@ CCCUCCU GUGUAUAAAUA AGAGUU UAUUUCGUG GCG AGA AUGCCAAC@LB@ |||:||| |||||:|||:| |||||: ||||:|:|| ||| ||| ||:|||||@LB@ GGGGGGA CACAUGUUUGU UCUCAG AUAAGGUAC CGC UCU UAUGGUUG@LB@3'-UUU...CUGAA GA UCUUCG AA AA-5'@LB@ | |@LB@ 60 2@LB@@LB@@LB@Energy -15.55 kcal/mol@LB@Hybridization Energy -46.252 kcal/mol@LB@Unfolding Energy - mRNA 13.1534 kcal/mol@LB@Unfolding Energy - sRNA 17.5467 kcal/mol@LB@@LB@Position - mRNA 132 -- 208@LB@Position - sRNA 3 -- 59@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 3 -- 9@LB@ |
70 |
0.02698 |
0.29 |
ct_381 |
artJ |
-6.76 |
0.162330 |
168 -- 194 |
31 -- 57 |
arginine ABC transporter substrate-binding protein ArtJ |
|
_____________167__________________________195\n_____________|____________________________|\n5'-AUU...UAUAG______CC__UA__C_____________GUGAG...GUG-3'\n______________UCCCUG__GU__GA_CAUU_GAGUCGGA\n______________:|||||__||__:|_||:|_|||||:||\n______________GGGGAC__CA__UU_GUGA_CUCAGUCU\n3'-UUU...GAAGG______A___UG__U____U________UCGAU...GAA-5'\n_____________|____________________________|\n_____________58___________________________30\n |
188 -- 194 |
31 -- 37 |
-25.975 kcal/mol |
9.18513 kcal/mol |
10.0297 kcal/mol |
167 195@LB@ | |@LB@5'-AUU...UAUAG CC UA C GUGAG...GUG-3'@LB@ UCCCUG GU GA CAUU GAGUCGGA@LB@ :||||| || :| ||:| |||||:||@LB@ GGGGAC CA UU GUGA CUCAGUCU@LB@3'-UUU...GAAGG A UG U U UCGAU...GAA-5'@LB@ | |@LB@ 58 30@LB@@LB@@LB@Energy -6.76 kcal/mol@LB@Hybridization Energy -25.975 kcal/mol@LB@Unfolding Energy - mRNA 9.18513 kcal/mol@LB@Unfolding Energy - sRNA 10.0297 kcal/mol@LB@@LB@Position - mRNA 168 -- 194@LB@Position - sRNA 31 -- 57@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 31 -- 37@LB@ |
121 |
0.04894 |
0.3262 |
ct_310 |
atpE |
-7.64 |
0.103947 |
27 -- 34 |
80 -- 87 |
V-type ATP synthase subunit E |
|
_____________26_______35\n_____________|________|\n5'-GCA...CCUUC________CCUUC...UUC-3'\n______________UACGGCUG\n______________|||||||:\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
28 -- 34 |
80 -- 86 |
-11.9035 kcal/mol |
3.17039 kcal/mol |
1.09752 kcal/mol |
26 35@LB@ | |@LB@5'-GCA...CCUUC CCUUC...UUC-3'@LB@ UACGGCUG@LB@ |||||||:@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -7.64 kcal/mol@LB@Hybridization Energy -11.9035 kcal/mol@LB@Unfolding Energy - mRNA 3.17039 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 27 -- 34@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 28 -- 34@LB@Position Seed - sRNA 80 -- 86@LB@ |
174 |
0.07335 |
0.3448 |
ct_777 |
bioF |
-7.25 |
0.126962 |
76 -- 92 |
19 -- 34 |
8-amino-7-oxononanoate synthase |
|
_____________75________________93\n_____________|_________________|\n5'-CUG...UCAGG_______G_____U___UUGGG...UUU-3'\n______________UAGAAGC_AUUCC_AUG\n______________:||||||_|||||_|||\n______________GUCUUCG_UAAGG_UAC\n3'-UUU...UCUCA_______A_________CGCAA...GAA-5'\n_____________|_________________|\n_____________35________________18\n |
76 -- 82 |
28 -- 34 |
-16.4612 kcal/mol |
4.23516 kcal/mol |
4.97732 kcal/mol |
75 93@LB@ | |@LB@5'-CUG...UCAGG G U UUGGG...UUU-3'@LB@ UAGAAGC AUUCC AUG@LB@ :|||||| ||||| |||@LB@ GUCUUCG UAAGG UAC@LB@3'-UUU...UCUCA A CGCAA...GAA-5'@LB@ | |@LB@ 35 18@LB@@LB@@LB@Energy -7.25 kcal/mol@LB@Hybridization Energy -16.4612 kcal/mol@LB@Unfolding Energy - mRNA 4.23516 kcal/mol@LB@Unfolding Energy - sRNA 4.97732 kcal/mol@LB@@LB@Position - mRNA 76 -- 92@LB@Position - sRNA 19 -- 34@LB@Position Seed - mRNA 76 -- 82@LB@Position Seed - sRNA 28 -- 34@LB@ |
127 |
0.0509 |
0.3262 |
ct_808 |
cafE |
-7.80 |
0.095102 |
169 -- 204 |
18 -- 57 |
ribonuclease E |
|
_____________168_________________________________________205\n_____________|___________________________________________|\n5'-GUU...GAGGA_______A______________CAU______ACG_________AAAAC...AAA-3'\n______________CUCCUGU____GAGCGC_AGAG___UUAGGA______CCAUGG\n______________|:|||||____:|:|:|_||||___|:||:|______||||||\n______________GGGGACA____UUUGUG_UCUC___AGUCUU______GGUACC\n3'-UUU...GAAGG_______CAUG______A_____________CGAUAA______GCAAU...GAA-5'\n_____________|___________________________________________|\n_____________58__________________________________________17\n |
169 -- 175 |
51 -- 57 |
-30.1775 kcal/mol |
9.43695 kcal/mol |
12.9362 kcal/mol |
168 205@LB@ | |@LB@5'-GUU...GAGGA A CAU ACG AAAAC...AAA-3'@LB@ CUCCUGU GAGCGC AGAG UUAGGA CCAUGG@LB@ |:||||| :|:|:| |||| |:||:| ||||||@LB@ GGGGACA UUUGUG UCUC AGUCUU GGUACC@LB@3'-UUU...GAAGG CAUG A CGAUAA GCAAU...GAA-5'@LB@ | |@LB@ 58 17@LB@@LB@@LB@Energy -7.80 kcal/mol@LB@Hybridization Energy -30.1775 kcal/mol@LB@Unfolding Energy - mRNA 9.43695 kcal/mol@LB@Unfolding Energy - sRNA 12.9362 kcal/mol@LB@@LB@Position - mRNA 169 -- 204@LB@Position - sRNA 18 -- 57@LB@Position Seed - mRNA 169 -- 175@LB@Position Seed - sRNA 51 -- 57@LB@ |