| 180 |
0.07821 |
0.3571 |
ct_831 |
murB |
-7.63 |
0.104376 |
230 -- 248 |
17 -- 33 |
UDP-N-acetylenolpyruvoylglucosamine reductase |
|
_____________229_________________249\n_____________|___________________|\n5'-GUU...GUUCA____U_________UAA__CGCUU...UAA-3'\n______________AGAA_CUGUUCCAU___GC\n______________||||_||:||||||___||\n______________UCUU_GAUAAGGUA___CG\n3'-UUU...CUCAG____C_________C____CAAUC...GAA-5'\n_____________|___________________|\n_____________34__________________16\n |
237 -- 243 |
20 -- 26 |
-14.8604 kcal/mol |
2.25495 kcal/mol |
4.97804 kcal/mol |
229 249@LB@ | |@LB@5'-GUU...GUUCA U UAA CGCUU...UAA-3'@LB@ AGAA CUGUUCCAU GC@LB@ |||| ||:|||||| ||@LB@ UCUU GAUAAGGUA CG@LB@3'-UUU...CUCAG C C CAAUC...GAA-5'@LB@ | |@LB@ 34 16@LB@@LB@@LB@Energy -7.63 kcal/mol@LB@Hybridization Energy -14.8604 kcal/mol@LB@Unfolding Energy - mRNA 2.25495 kcal/mol@LB@Unfolding Energy - sRNA 4.97804 kcal/mol@LB@@LB@Position - mRNA 230 -- 248@LB@Position - sRNA 17 -- 33@LB@Position Seed - mRNA 237 -- 243@LB@Position Seed - sRNA 20 -- 26@LB@ |
| 51 |
0.01855 |
0.29 |
ct_758 |
murD |
-8.46 |
0.066834 |
21 -- 39 |
25 -- 51 |
UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|
_____________20__________________________40\n_____________|___________________________|\n5'-CUG...GUGAU___________________________AAAUU...ACA-3'\n______________UGUACA________AGUCGGAAGUUAU\n______________||||||________||||:||||:|||\n______________ACAUGU________UCAGUCUUCGAUA\n3'-UUU...GGGAC______UUGUGAUC_____________AGGUA...GAA-5'\n_____________|___________________________|\n_____________52__________________________24\n |
33 -- 39 |
25 -- 31 |
-21.2974 kcal/mol |
1.17475 kcal/mol |
11.6617 kcal/mol |
20 40@LB@ | |@LB@5'-CUG...GUGAU AAAUU...ACA-3'@LB@ UGUACA AGUCGGAAGUUAU@LB@ |||||| ||||:||||:|||@LB@ ACAUGU UCAGUCUUCGAUA@LB@3'-UUU...GGGAC UUGUGAUC AGGUA...GAA-5'@LB@ | |@LB@ 52 24@LB@@LB@@LB@Energy -8.46 kcal/mol@LB@Hybridization Energy -21.2974 kcal/mol@LB@Unfolding Energy - mRNA 1.17475 kcal/mol@LB@Unfolding Energy - sRNA 11.6617 kcal/mol@LB@@LB@Position - mRNA 21 -- 39@LB@Position - sRNA 25 -- 51@LB@Position Seed - mRNA 33 -- 39@LB@Position Seed - sRNA 25 -- 31@LB@ |
| 89 |
0.03269 |
0.2942 |
ct_269 |
murE |
-8.94 |
0.051230 |
172 -- 183 |
46 -- 57 |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase |
|
_____________171__________184\n_____________|____________|\n5'-AUC...UGAAG____________UGUCU...UUG-3'\n______________CCCUUGUGUGCG\n______________|||:|||||:|:\n______________GGGGACACAUGU\n3'-UUU...GAAGG____________UUGUG...GAA-5'\n_____________|____________|\n_____________58___________45\n |
176 -- 182 |
47 -- 53 |
-19.7508 kcal/mol |
3.51628 kcal/mol |
7.29173 kcal/mol |
171 184@LB@ | |@LB@5'-AUC...UGAAG UGUCU...UUG-3'@LB@ CCCUUGUGUGCG@LB@ |||:|||||:|:@LB@ GGGGACACAUGU@LB@3'-UUU...GAAGG UUGUG...GAA-5'@LB@ | |@LB@ 58 45@LB@@LB@@LB@Energy -8.94 kcal/mol@LB@Hybridization Energy -19.7508 kcal/mol@LB@Unfolding Energy - mRNA 3.51628 kcal/mol@LB@Unfolding Energy - sRNA 7.29173 kcal/mol@LB@@LB@Position - mRNA 172 -- 183@LB@Position - sRNA 46 -- 57@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 47 -- 53@LB@ |
| 189 |
0.0841 |
0.363 |
ct_792 |
mutS |
-5.18 |
0.336119 |
140 -- 151 |
22 -- 33 |
DNA mismatch repair protein MutS |
|
_____________139__________152\n_____________|____________|\n5'-AUA...ACAUA____C_______CCUAC...AAG-3'\n______________AGAG_CUGUUCC\n______________|||:_||:||||\n______________UCUU_GAUAAGG\n3'-UUU...CUCAG____C_______UACCG...GAA-5'\n_____________|____________|\n_____________34___________21\n |
145 -- 151 |
22 -- 28 |
-12.2041 kcal/mol |
2.29966 kcal/mol |
4.72509 kcal/mol |
139 152@LB@ | |@LB@5'-AUA...ACAUA C CCUAC...AAG-3'@LB@ AGAG CUGUUCC@LB@ |||: ||:||||@LB@ UCUU GAUAAGG@LB@3'-UUU...CUCAG C UACCG...GAA-5'@LB@ | |@LB@ 34 21@LB@@LB@@LB@Energy -5.18 kcal/mol@LB@Hybridization Energy -12.2041 kcal/mol@LB@Unfolding Energy - mRNA 2.29966 kcal/mol@LB@Unfolding Energy - sRNA 4.72509 kcal/mol@LB@@LB@Position - mRNA 140 -- 151@LB@Position - sRNA 22 -- 33@LB@Position Seed - mRNA 145 -- 151@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 5 |
0.0004969 |
0.07439 |
ct_056 |
N/A |
-17.69 |
0.000175 |
196 -- 255 |
6 -- 56 |
|
|
_____________195________________________________________________________________256\n_____________|__________________________________________________________________|\n5'-GUG...AGGAU_____AU__________CCCU__C______UUACGUAAACAGACAU_______A____________UUCCU...AAG-3'\n______________CCCUG______GACACU____UC_GAAGCU________________UUCC_UG__GUUAGAAUACC\n______________|||||______:|||||____||_||||||________________||||_||__|||||||||||\n______________GGGAC______UUGUGA____AG_CUUCGA________________AAGG_AC__CAAUCUUAUGG\n3'-UUU...AAGGG_____ACAUGU______UCUC__U______U___________________U__CG___________UUGAA-5'\n_____________|__________________________________________________________________|\n_____________57_________________________________________________________________5\n |
249 -- 255 |
6 -- 12 |
-39.697 kcal/mol |
5.45688 kcal/mol |
16.5497 kcal/mol |
195 256@LB@ | |@LB@5'-GUG...AGGAU AU CCCU C UUACGUAAACAGACAU A UUCCU...AAG-3'@LB@ CCCUG GACACU UC GAAGCU UUCC UG GUUAGAAUACC@LB@ ||||| :||||| || |||||| |||| || |||||||||||@LB@ GGGAC UUGUGA AG CUUCGA AAGG AC CAAUCUUAUGG@LB@3'-UUU...AAGGG ACAUGU UCUC U U U CG UUGAA-5'@LB@ | |@LB@ 57 5@LB@@LB@@LB@Energy -17.69 kcal/mol@LB@Hybridization Energy -39.697 kcal/mol@LB@Unfolding Energy - mRNA 5.45688 kcal/mol@LB@Unfolding Energy - sRNA 16.5497 kcal/mol@LB@@LB@Position - mRNA 196 -- 255@LB@Position - sRNA 6 -- 56@LB@Position Seed - mRNA 249 -- 255@LB@Position Seed - sRNA 6 -- 12@LB@ |
| 8 |
0.0008373 |
0.07962 |
ct_066 |
N/A |
-11.14 |
0.014316 |
190 -- 205 |
17 -- 33 |
|
|
_____________189_______________206\n_____________|_________________|\n5'-UUU...CACUA_________________UACGG...GUU-3'\n______________AGGAGCUAUUC_AUGGC\n______________||:||||||||_|||||\n______________UCUUCGAUAAG_UACCG\n3'-UUU...CUCAG___________G_____CAAUC...GAA-5'\n_____________|_________________|\n_____________34________________16\n |
194 -- 200 |
23 -- 29 |
-22.6652 kcal/mol |
6.55112 kcal/mol |
4.97804 kcal/mol |
189 206@LB@ | |@LB@5'-UUU...CACUA UACGG...GUU-3'@LB@ AGGAGCUAUUC AUGGC@LB@ ||:|||||||| |||||@LB@ UCUUCGAUAAG UACCG@LB@3'-UUU...CUCAG G CAAUC...GAA-5'@LB@ | |@LB@ 34 16@LB@@LB@@LB@Energy -11.14 kcal/mol@LB@Hybridization Energy -22.6652 kcal/mol@LB@Unfolding Energy - mRNA 6.55112 kcal/mol@LB@Unfolding Energy - sRNA 4.97804 kcal/mol@LB@@LB@Position - mRNA 190 -- 205@LB@Position - sRNA 17 -- 33@LB@Position Seed - mRNA 194 -- 200@LB@Position Seed - sRNA 23 -- 29@LB@ |
| 13 |
0.003406 |
0.1836 |
ct_744 |
N/A |
-10.55 |
0.020316 |
225 -- 240 |
17 -- 33 |
|
|
_____________224_______________241\n_____________|_________________|\n5'-AAA...UCUCU_________________UUCUG...AAU-3'\n______________GGAAGCUGUU_CAUGGU\n______________:||||||:||_|||||:\n______________UCUUCGAUAA_GUACCG\n3'-UUU...CUCAG__________G______CAAUC...GAA-5'\n_____________|_________________|\n_____________34________________16\n |
225 -- 231 |
27 -- 33 |
-21.2225 kcal/mol |
5.69382 kcal/mol |
4.97804 kcal/mol |
224 241@LB@ | |@LB@5'-AAA...UCUCU UUCUG...AAU-3'@LB@ GGAAGCUGUU CAUGGU@LB@ :||||||:|| |||||:@LB@ UCUUCGAUAA GUACCG@LB@3'-UUU...CUCAG G CAAUC...GAA-5'@LB@ | |@LB@ 34 16@LB@@LB@@LB@Energy -10.55 kcal/mol@LB@Hybridization Energy -21.2225 kcal/mol@LB@Unfolding Energy - mRNA 5.69382 kcal/mol@LB@Unfolding Energy - sRNA 4.97804 kcal/mol@LB@@LB@Position - mRNA 225 -- 240@LB@Position - sRNA 17 -- 33@LB@Position Seed - mRNA 225 -- 231@LB@Position Seed - sRNA 27 -- 33@LB@ |
| 14 |
0.003406 |
0.1836 |
ct_744 |
N/A |
-10.55 |
0.020316 |
225 -- 240 |
17 -- 33 |
|
|
_____________224_______________241\n_____________|_________________|\n5'-AAA...UCUCU_________________UUCUG...AAU-3'\n______________GGAAGCUGUU_CAUGGU\n______________:||||||:||_|||||:\n______________UCUUCGAUAA_GUACCG\n3'-UUU...CUCAG__________G______CAAUC...GAA-5'\n_____________|_________________|\n_____________34________________16\n |
225 -- 231 |
27 -- 33 |
-21.2225 kcal/mol |
5.69382 kcal/mol |
4.97804 kcal/mol |
224 241@LB@ | |@LB@5'-AAA...UCUCU UUCUG...AAU-3'@LB@ GGAAGCUGUU CAUGGU@LB@ :||||||:|| |||||:@LB@ UCUUCGAUAA GUACCG@LB@3'-UUU...CUCAG G CAAUC...GAA-5'@LB@ | |@LB@ 34 16@LB@@LB@@LB@Energy -10.55 kcal/mol@LB@Hybridization Energy -21.2225 kcal/mol@LB@Unfolding Energy - mRNA 5.69382 kcal/mol@LB@Unfolding Energy - sRNA 4.97804 kcal/mol@LB@@LB@Position - mRNA 225 -- 240@LB@Position - sRNA 17 -- 33@LB@Position Seed - mRNA 225 -- 231@LB@Position Seed - sRNA 27 -- 33@LB@ |
| 15 |
0.003628 |
0.1836 |
ct_134 |
N/A |
-6.77 |
0.161910 |
221 -- 229 |
80 -- 88 |
|
|
_____________220_______230\n_____________|_________|\n5'-CAA...UGUGU_________CGAUG...UUC-3'\n______________AUACGGUUA\n______________||||||:||\n______________UAUGCCGAU\n3'-UUU...GCCUC_________UGAGG...GAA-5'\n_____________|_________|\n_____________89________79\n |
223 -- 229 |
80 -- 86 |
-9.99522 kcal/mol |
2.13198 kcal/mol |
1.09753 kcal/mol |
220 230@LB@ | |@LB@5'-CAA...UGUGU CGAUG...UUC-3'@LB@ AUACGGUUA@LB@ ||||||:||@LB@ UAUGCCGAU@LB@3'-UUU...GCCUC UGAGG...GAA-5'@LB@ | |@LB@ 89 79@LB@@LB@@LB@Energy -6.77 kcal/mol@LB@Hybridization Energy -9.99522 kcal/mol@LB@Unfolding Energy - mRNA 2.13198 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 221 -- 229@LB@Position - sRNA 80 -- 88@LB@Position Seed - mRNA 223 -- 229@LB@Position Seed - sRNA 80 -- 86@LB@ |
| 16 |
0.003859 |
0.1836 |
ct_666 |
N/A |
-9.59 |
0.035525 |
190 -- 206 |
16 -- 33 |
|
|
_____________189________________207\n_____________|__________________|\n5'-GAU...AAAAG_____G____________AGCGG...AAA-3'\n______________AGAGG_UA_UCUAUGGCG\n______________|||:|_||_||:||||||\n______________UCUUC_AU_AGGUACCGC\n3'-UUU...CUCAG_____G__A_________AAUCU...GAA-5'\n_____________|__________________|\n_____________34_________________15\n |
200 -- 206 |
16 -- 22 |
-21.7302 kcal/mol |
4.22495 kcal/mol |
7.91433 kcal/mol |
189 207@LB@ | |@LB@5'-GAU...AAAAG G AGCGG...AAA-3'@LB@ AGAGG UA UCUAUGGCG@LB@ |||:| || ||:||||||@LB@ UCUUC AU AGGUACCGC@LB@3'-UUU...CUCAG G A AAUCU...GAA-5'@LB@ | |@LB@ 34 15@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -21.7302 kcal/mol@LB@Unfolding Energy - mRNA 4.22495 kcal/mol@LB@Unfolding Energy - sRNA 7.91433 kcal/mol@LB@@LB@Position - mRNA 190 -- 206@LB@Position - sRNA 16 -- 33@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 16 -- 22@LB@ |
