92 |
0.03292 |
0.2942 |
ct_558 |
lipA |
-15.60 |
0.000793 |
187 -- 244 |
3 -- 58 |
lipoyl synthase |
|
_____________186_________________________________________________________245\n_____________|___________________________________________________________|\n5'-ACU...AUAUG_______CUAAA_____ACC__U______UCUC_______UAAAAAAUCU______C__CAGAU...AAA-3'\n______________CCCCCUG_____AAAUG___GA_UCAGAA____CUAUUCC___________AUACC_GC\n______________|||||||_____|||::___||_||||||____|||||||___________|||||_:|\n______________GGGGGAC_____UUUGU___CU_AGUCUU____GAUAAGG___________UAUGG_UG\n3'-UUU...UGAAG_______ACAUG_____GAU__C______C__________UACCGCAAUCU_____U__AA-5'\n_____________|___________________________________________________________|\n_____________59__________________________________________________________2\n |
220 -- 226 |
22 -- 28 |
-35.9268 kcal/mol |
3.77883 kcal/mol |
16.5523 kcal/mol |
186 245@LB@ | |@LB@5'-ACU...AUAUG CUAAA ACC U UCUC UAAAAAAUCU C CAGAU...AAA-3'@LB@ CCCCCUG AAAUG GA UCAGAA CUAUUCC AUACC GC@LB@ ||||||| |||:: || |||||| ||||||| ||||| :|@LB@ GGGGGAC UUUGU CU AGUCUU GAUAAGG UAUGG UG@LB@3'-UUU...UGAAG ACAUG GAU C C UACCGCAAUCU U AA-5'@LB@ | |@LB@ 59 2@LB@@LB@@LB@Energy -15.60 kcal/mol@LB@Hybridization Energy -35.9268 kcal/mol@LB@Unfolding Energy - mRNA 3.77883 kcal/mol@LB@Unfolding Energy - sRNA 16.5523 kcal/mol@LB@@LB@Position - mRNA 187 -- 244@LB@Position - sRNA 3 -- 58@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 22 -- 28@LB@ |
172 |
0.07285 |
0.3448 |
ct_090 |
lcrD |
-6.84 |
0.155915 |
81 -- 102 |
18 -- 39 |
low calcium response protein D |
|
_____________80______________________103\n_____________|_______________________|\n5'-AUU...GGAAA___________U________GA_ACCAC...UGU-3'\n______________AGAGUU_GAAG_UUAUUCCA__G\n______________|||||:_||||_:|||||||__|\n______________UCUCAG_CUUC_GAUAAGGU__C\n3'-UUU...UGUGA______U_____________AC_GCAAU...GAA-5'\n_____________|_______________________|\n_____________40______________________17\n |
93 -- 99 |
21 -- 27 |
-20.344 kcal/mol |
3.91171 kcal/mol |
9.59078 kcal/mol |
80 103@LB@ | |@LB@5'-AUU...GGAAA U GA ACCAC...UGU-3'@LB@ AGAGUU GAAG UUAUUCCA G@LB@ |||||: |||| :||||||| |@LB@ UCUCAG CUUC GAUAAGGU C@LB@3'-UUU...UGUGA U AC GCAAU...GAA-5'@LB@ | |@LB@ 40 17@LB@@LB@@LB@Energy -6.84 kcal/mol@LB@Hybridization Energy -20.344 kcal/mol@LB@Unfolding Energy - mRNA 3.91171 kcal/mol@LB@Unfolding Energy - sRNA 9.59078 kcal/mol@LB@@LB@Position - mRNA 81 -- 102@LB@Position - sRNA 18 -- 39@LB@Position Seed - mRNA 93 -- 99@LB@Position Seed - sRNA 21 -- 27@LB@ |
112 |
0.04461 |
0.3262 |
ct_089 |
lcrE |
-7.82 |
0.094118 |
129 -- 157 |
3 -- 33 |
low calcium response protein E |
|
_____________128_____________________________158\n_____________|_______________________________|\n5'-CGG...UACCA_______UUA_____AAA_____________CUUUG...UUA-3'\n______________AGAAGUU___CC_UG___UUAGAAU_CCAGC\n______________|||||:|___||_||___|||||||_|||:|\n______________UCUUCGA___GG_AC___AAUCUUA_GGUUG\n3'-UUU...CUCAG_______UAA__U__CGC_______U_____AA-5'\n_____________|_______________________________|\n_____________34______________________________2\n |
129 -- 135 |
27 -- 33 |
-21.9416 kcal/mol |
5.52555 kcal/mol |
8.59196 kcal/mol |
128 158@LB@ | |@LB@5'-CGG...UACCA UUA AAA CUUUG...UUA-3'@LB@ AGAAGUU CC UG UUAGAAU CCAGC@LB@ |||||:| || || ||||||| |||:|@LB@ UCUUCGA GG AC AAUCUUA GGUUG@LB@3'-UUU...CUCAG UAA U CGC U AA-5'@LB@ | |@LB@ 34 2@LB@@LB@@LB@Energy -7.82 kcal/mol@LB@Hybridization Energy -21.9416 kcal/mol@LB@Unfolding Energy - mRNA 5.52555 kcal/mol@LB@Unfolding Energy - sRNA 8.59196 kcal/mol@LB@@LB@Position - mRNA 129 -- 157@LB@Position - sRNA 3 -- 33@LB@Position Seed - mRNA 129 -- 135@LB@Position Seed - sRNA 27 -- 33@LB@ |
179 |
0.07718 |
0.3544 |
ct_781 |
lysS |
-5.99 |
0.234962 |
194 -- 201 |
79 -- 86 |
lysine--tRNA ligase |
|
_____________193______202\n_____________|________|\n5'-AAA...AAAGG________UGUCU...AUC-3'\n______________ACGGUUGA\n______________||||:|:|\n______________UGCCGAUU\n3'-UUU...CUCUA________GAGGU...GAA-5'\n_____________|________|\n_____________87_______78\n |
195 -- 201 |
79 -- 85 |
-9.06205 kcal/mol |
1.97593 kcal/mol |
1.09752 kcal/mol |
193 202@LB@ | |@LB@5'-AAA...AAAGG UGUCU...AUC-3'@LB@ ACGGUUGA@LB@ ||||:|:|@LB@ UGCCGAUU@LB@3'-UUU...CUCUA GAGGU...GAA-5'@LB@ | |@LB@ 87 78@LB@@LB@@LB@Energy -5.99 kcal/mol@LB@Hybridization Energy -9.06205 kcal/mol@LB@Unfolding Energy - mRNA 1.97593 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 194 -- 201@LB@Position - sRNA 79 -- 86@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 79 -- 85@LB@ |
170 |
0.07264 |
0.3448 |
ct_415 |
yebL |
-4.69 |
0.409849 |
24 -- 30 |
22 -- 28 |
metal ABC transporter substrate-binding protein |
|
_____________23______31\n_____________|_______|\n5'-AUU...AAAAA_______UCACC...CCU-3'\n______________CUGUUCC\n______________||:||||\n______________GAUAAGG\n3'-UUU...UCUUC_______UACCG...GAA-5'\n_____________|_______|\n_____________29______21\n |
24 -- 30 |
22 -- 28 |
-9.14166 kcal/mol |
0.102316 kcal/mol |
4.35007 kcal/mol |
23 31@LB@ | |@LB@5'-AUU...AAAAA UCACC...CCU-3'@LB@ CUGUUCC@LB@ ||:||||@LB@ GAUAAGG@LB@3'-UUU...UCUUC UACCG...GAA-5'@LB@ | |@LB@ 29 21@LB@@LB@@LB@Energy -4.69 kcal/mol@LB@Hybridization Energy -9.14166 kcal/mol@LB@Unfolding Energy - mRNA 0.102316 kcal/mol@LB@Unfolding Energy - sRNA 4.35007 kcal/mol@LB@@LB@Position - mRNA 24 -- 30@LB@Position - sRNA 22 -- 28@LB@Position Seed - mRNA 24 -- 30@LB@Position Seed - sRNA 22 -- 28@LB@ |
197 |
0.08765 |
0.3657 |
ct_851 |
map |
-5.60 |
0.279866 |
107 -- 113 |
81 -- 87 |
methionine aminopeptidase |
|
_____________106_____114\n_____________|_______|\n5'-GCU...CUUUC_______UUCAA...AAC-3'\n______________UACGGCU\n______________|||||||\n______________AUGCCGA\n3'-UUU...CCUCU_______UUGAG...GAA-5'\n_____________|_______|\n_____________88______80\n |
107 -- 113 |
81 -- 87 |
-10.6361 kcal/mol |
3.93565 kcal/mol |
1.09752 kcal/mol |
106 114@LB@ | |@LB@5'-GCU...CUUUC UUCAA...AAC-3'@LB@ UACGGCU@LB@ |||||||@LB@ AUGCCGA@LB@3'-UUU...CCUCU UUGAG...GAA-5'@LB@ | |@LB@ 88 80@LB@@LB@@LB@Energy -5.60 kcal/mol@LB@Hybridization Energy -10.6361 kcal/mol@LB@Unfolding Energy - mRNA 3.93565 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 107 -- 113@LB@Position - sRNA 81 -- 87@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 81 -- 87@LB@ |
72 |
0.02709 |
0.29 |
ct_530 |
fmt |
-6.32 |
0.201483 |
239 -- 246 |
80 -- 87 |
methionyl-tRNA formyltransferase |
|
_____________238______247\n_____________|________|\n5'-UAA...CAAUU________CUGUU...CGC-3'\n______________UGCGGCUA\n______________|:||||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
240 -- 246 |
80 -- 86 |
-12.3749 kcal/mol |
4.96164 kcal/mol |
1.09752 kcal/mol |
238 247@LB@ | |@LB@5'-UAA...CAAUU CUGUU...CGC-3'@LB@ UGCGGCUA@LB@ |:||||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -6.32 kcal/mol@LB@Hybridization Energy -12.3749 kcal/mol@LB@Unfolding Energy - mRNA 4.96164 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 239 -- 246@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 80 -- 86@LB@ |
200 |
0.0896 |
0.3683 |
ct_487 |
yhhF |
-5.19 |
0.334580 |
14 -- 20 |
79 -- 85 |
methyltransferase |
|
_____________13______21\n_____________|_______|\n5'-ACG...UCCUC_______UAAUG...UUA-3'\n______________CGGUUAG\n______________|||:||:\n______________GCCGAUU\n3'-UUU...UCUAU_______GAGGU...GAA-5'\n_____________|_______|\n_____________86______78\n |
14 -- 20 |
79 -- 85 |
-7.01592 kcal/mol |
0.727938 kcal/mol |
1.09751 kcal/mol |
13 21@LB@ | |@LB@5'-ACG...UCCUC UAAUG...UUA-3'@LB@ CGGUUAG@LB@ |||:||:@LB@ GCCGAUU@LB@3'-UUU...UCUAU GAGGU...GAA-5'@LB@ | |@LB@ 86 78@LB@@LB@@LB@Energy -5.19 kcal/mol@LB@Hybridization Energy -7.01592 kcal/mol@LB@Unfolding Energy - mRNA 0.727938 kcal/mol@LB@Unfolding Energy - sRNA 1.09751 kcal/mol@LB@@LB@Position - mRNA 14 -- 20@LB@Position - sRNA 79 -- 85@LB@Position Seed - mRNA 14 -- 20@LB@Position Seed - sRNA 79 -- 85@LB@ |
140 |
0.05617 |
0.3262 |
ct_759 |
nlpD |
-2.72 |
0.757894 |
26 -- 32 |
51 -- 57 |
muramidase |
|
_____________25______33\n_____________|_______|\n5'-GAG...AGAGU_______AACCG...AGU-3'\n______________UCCCUGU\n______________:||||||\n______________GGGGACA\n3'-UUU...GAAGG_______CAUGU...GAA-5'\n_____________|_______|\n_____________58______50\n |
26 -- 32 |
51 -- 57 |
-10.8083 kcal/mol |
0.989353 kcal/mol |
7.09845 kcal/mol |
25 33@LB@ | |@LB@5'-GAG...AGAGU AACCG...AGU-3'@LB@ UCCCUGU@LB@ :||||||@LB@ GGGGACA@LB@3'-UUU...GAAGG CAUGU...GAA-5'@LB@ | |@LB@ 58 50@LB@@LB@@LB@Energy -2.72 kcal/mol@LB@Hybridization Energy -10.8083 kcal/mol@LB@Unfolding Energy - mRNA 0.989353 kcal/mol@LB@Unfolding Energy - sRNA 7.09845 kcal/mol@LB@@LB@Position - mRNA 26 -- 32@LB@Position - sRNA 51 -- 57@LB@Position Seed - mRNA 26 -- 32@LB@Position Seed - sRNA 51 -- 57@LB@ |
128 |
0.05098 |
0.3262 |
ct_279 |
nqr3 |
-7.28 |
0.125274 |
283 -- 291 |
51 -- 59 |
Na(+)-translocating NADH-quinone reductase subunit C |
|
_____________282_______292\n_____________|_________|\n5'-CCG...UGGUA_________CUUCU...UGU-3'\n______________CCCUCCUGU\n______________|||:|||||\n______________GGGGGGACA\n3'-UUU...CUGAA_________CAUGU...GAA-5'\n_____________|_________|\n_____________60________50\n |
285 -- 291 |
51 -- 57 |
-15.9842 kcal/mol |
0.606269 kcal/mol |
8.10291 kcal/mol |
282 292@LB@ | |@LB@5'-CCG...UGGUA CUUCU...UGU-3'@LB@ CCCUCCUGU@LB@ |||:|||||@LB@ GGGGGGACA@LB@3'-UUU...CUGAA CAUGU...GAA-5'@LB@ | |@LB@ 60 50@LB@@LB@@LB@Energy -7.28 kcal/mol@LB@Hybridization Energy -15.9842 kcal/mol@LB@Unfolding Energy - mRNA 0.606269 kcal/mol@LB@Unfolding Energy - sRNA 8.10291 kcal/mol@LB@@LB@Position - mRNA 283 -- 291@LB@Position - sRNA 51 -- 59@LB@Position Seed - mRNA 285 -- 291@LB@Position Seed - sRNA 51 -- 57@LB@ |