15 |
0.003628 |
0.1836 |
ct_134 |
N/A |
-6.77 |
0.161910 |
221 -- 229 |
80 -- 88 |
|
|
_____________220_______230\n_____________|_________|\n5'-CAA...UGUGU_________CGAUG...UUC-3'\n______________AUACGGUUA\n______________||||||:||\n______________UAUGCCGAU\n3'-UUU...GCCUC_________UGAGG...GAA-5'\n_____________|_________|\n_____________89________79\n |
223 -- 229 |
80 -- 86 |
-9.99522 kcal/mol |
2.13198 kcal/mol |
1.09753 kcal/mol |
220 230@LB@ | |@LB@5'-CAA...UGUGU CGAUG...UUC-3'@LB@ AUACGGUUA@LB@ ||||||:||@LB@ UAUGCCGAU@LB@3'-UUU...GCCUC UGAGG...GAA-5'@LB@ | |@LB@ 89 79@LB@@LB@@LB@Energy -6.77 kcal/mol@LB@Hybridization Energy -9.99522 kcal/mol@LB@Unfolding Energy - mRNA 2.13198 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 221 -- 229@LB@Position - sRNA 80 -- 88@LB@Position Seed - mRNA 223 -- 229@LB@Position Seed - sRNA 80 -- 86@LB@ |
16 |
0.003859 |
0.1836 |
ct_666 |
N/A |
-9.59 |
0.035525 |
190 -- 206 |
16 -- 33 |
|
|
_____________189________________207\n_____________|__________________|\n5'-GAU...AAAAG_____G____________AGCGG...AAA-3'\n______________AGAGG_UA_UCUAUGGCG\n______________|||:|_||_||:||||||\n______________UCUUC_AU_AGGUACCGC\n3'-UUU...CUCAG_____G__A_________AAUCU...GAA-5'\n_____________|__________________|\n_____________34_________________15\n |
200 -- 206 |
16 -- 22 |
-21.7302 kcal/mol |
4.22495 kcal/mol |
7.91433 kcal/mol |
189 207@LB@ | |@LB@5'-GAU...AAAAG G AGCGG...AAA-3'@LB@ AGAGG UA UCUAUGGCG@LB@ |||:| || ||:||||||@LB@ UCUUC AU AGGUACCGC@LB@3'-UUU...CUCAG G A AAUCU...GAA-5'@LB@ | |@LB@ 34 15@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -21.7302 kcal/mol@LB@Unfolding Energy - mRNA 4.22495 kcal/mol@LB@Unfolding Energy - sRNA 7.91433 kcal/mol@LB@@LB@Position - mRNA 190 -- 206@LB@Position - sRNA 16 -- 33@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 16 -- 22@LB@ |
23 |
0.006311 |
0.2093 |
ct_671 |
N/A |
-7.19 |
0.130787 |
265 -- 279 |
17 -- 34 |
|
|
_____________264_________________280\n_____________|___________________|\n5'-CAA...ACGUA________________A__CUAGA...UCC-3'\n______________CAGAGGCU____CAUG_GC\n______________||||:|||____||||_||\n______________GUCUUCGA____GUAC_CG\n3'-UUU...UCUCA________UAAG_______CAAUC...GAA-5'\n_____________|___________________|\n_____________35__________________16\n |
266 -- 272 |
27 -- 33 |
-15.8996 kcal/mol |
3.73088 kcal/mol |
4.97809 kcal/mol |
264 280@LB@ | |@LB@5'-CAA...ACGUA A CUAGA...UCC-3'@LB@ CAGAGGCU CAUG GC@LB@ ||||:||| |||| ||@LB@ GUCUUCGA GUAC CG@LB@3'-UUU...UCUCA UAAG CAAUC...GAA-5'@LB@ | |@LB@ 35 16@LB@@LB@@LB@Energy -7.19 kcal/mol@LB@Hybridization Energy -15.8996 kcal/mol@LB@Unfolding Energy - mRNA 3.73088 kcal/mol@LB@Unfolding Energy - sRNA 4.97809 kcal/mol@LB@@LB@Position - mRNA 265 -- 279@LB@Position - sRNA 17 -- 34@LB@Position Seed - mRNA 266 -- 272@LB@Position Seed - sRNA 27 -- 33@LB@ |
33 |
0.01042 |
0.2518 |
ct_780 |
N/A |
-7.85 |
0.092931 |
30 -- 50 |
15 -- 34 |
|
|
_____________29____________________51\n_____________|_____________________|\n5'-UGU...AAAAA___C____GAA_G________GUCAA...UCA-3'\n______________CAG_AAGU___U_CAUGGCGU\n______________|||_|||:___|_||||||||\n______________GUC_UUCG___A_GUACCGCA\n3'-UUU...UCUCA________AUA_G________AUCUU...GAA-5'\n_____________|_____________________|\n_____________35____________________14\n |
44 -- 50 |
15 -- 21 |
-20.7959 kcal/mol |
4.71518 kcal/mol |
8.23265 kcal/mol |
29 51@LB@ | |@LB@5'-UGU...AAAAA C GAA G GUCAA...UCA-3'@LB@ CAG AAGU U CAUGGCGU@LB@ ||| |||: | ||||||||@LB@ GUC UUCG A GUACCGCA@LB@3'-UUU...UCUCA AUA G AUCUU...GAA-5'@LB@ | |@LB@ 35 14@LB@@LB@@LB@Energy -7.85 kcal/mol@LB@Hybridization Energy -20.7959 kcal/mol@LB@Unfolding Energy - mRNA 4.71518 kcal/mol@LB@Unfolding Energy - sRNA 8.23265 kcal/mol@LB@@LB@Position - mRNA 30 -- 50@LB@Position - sRNA 15 -- 34@LB@Position Seed - mRNA 44 -- 50@LB@Position Seed - sRNA 15 -- 21@LB@ |
34 |
0.01043 |
0.2518 |
ct_642 |
N/A |
-9.37 |
0.040224 |
239 -- 246 |
53 -- 60 |
|
|
_____________238______247\n_____________|________|\n5'-AGG...UCUUC________CUUCG...CUG-3'\n______________UCCCCCCU\n______________||||||||\n______________AGGGGGGA\n3'-UUU...ACUGA________CACAU...GAA-5'\n_____________|________|\n_____________61_______52\n |
240 -- 246 |
53 -- 59 |
-15.9954 kcal/mol |
0.170944 kcal/mol |
6.45136 kcal/mol |
238 247@LB@ | |@LB@5'-AGG...UCUUC CUUCG...CUG-3'@LB@ UCCCCCCU@LB@ ||||||||@LB@ AGGGGGGA@LB@3'-UUU...ACUGA CACAU...GAA-5'@LB@ | |@LB@ 61 52@LB@@LB@@LB@Energy -9.37 kcal/mol@LB@Hybridization Energy -15.9954 kcal/mol@LB@Unfolding Energy - mRNA 0.170944 kcal/mol@LB@Unfolding Energy - sRNA 6.45136 kcal/mol@LB@@LB@Position - mRNA 239 -- 246@LB@Position - sRNA 53 -- 60@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 53 -- 59@LB@ |
35 |
0.01072 |
0.2518 |
ct_483 |
N/A |
-8.14 |
0.079674 |
97 -- 146 |
5 -- 57 |
|
|
_____________96______________________________________________________147\n_____________|_______________________________________________________|\n5'-UAG...GUCUU____GAC_______G_GAAAU_____UC____________AAAAAAA________AGGUA...GCG-3'\n______________CUCC____UACAGA_A_____GAGUC_____CUAUUCCAU________AAUACCA\n______________|:||____||||:|_|_____|||||_____|||||||||________|||||||\n______________GGGG____AUGUUU_U_____CUCAG_____GAUAAGGUA________UUAUGGU\n3'-UUU...GAAGG____ACAC______G_GAU_______UCUUC_________CCGCAAUC_______UGAA-5'\n_____________|_______________________________________________________|\n_____________58______________________________________________________4\n |
140 -- 146 |
5 -- 11 |
-33.404 kcal/mol |
8.71732 kcal/mol |
16.5501 kcal/mol |
96 147@LB@ | |@LB@5'-UAG...GUCUU GAC G GAAAU UC AAAAAAA AGGUA...GCG-3'@LB@ CUCC UACAGA A GAGUC CUAUUCCAU AAUACCA@LB@ |:|| ||||:| | ||||| ||||||||| |||||||@LB@ GGGG AUGUUU U CUCAG GAUAAGGUA UUAUGGU@LB@3'-UUU...GAAGG ACAC G GAU UCUUC CCGCAAUC UGAA-5'@LB@ | |@LB@ 58 4@LB@@LB@@LB@Energy -8.14 kcal/mol@LB@Hybridization Energy -33.404 kcal/mol@LB@Unfolding Energy - mRNA 8.71732 kcal/mol@LB@Unfolding Energy - sRNA 16.5501 kcal/mol@LB@@LB@Position - mRNA 97 -- 146@LB@Position - sRNA 5 -- 57@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 5 -- 11@LB@ |
40 |
0.01393 |
0.2859 |
ct_695 |
N/A |
-4.73 |
0.403172 |
160 -- 166 |
82 -- 88 |
|
|
_____________159_____167\n_____________|_______|\n5'-AUU...AAGGU_______GUUCG...AGG-3'\n______________AUGCGGU\n______________||:|||:\n______________UAUGCCG\n3'-UUU...GCCUC_______AUUGA...GAA-5'\n_____________|_______|\n_____________89______81\n |
160 -- 166 |
82 -- 88 |
-8.16543 kcal/mol |
2.33498 kcal/mol |
1.09753 kcal/mol |
159 167@LB@ | |@LB@5'-AUU...AAGGU GUUCG...AGG-3'@LB@ AUGCGGU@LB@ ||:|||:@LB@ UAUGCCG@LB@3'-UUU...GCCUC AUUGA...GAA-5'@LB@ | |@LB@ 89 81@LB@@LB@@LB@Energy -4.73 kcal/mol@LB@Hybridization Energy -8.16543 kcal/mol@LB@Unfolding Energy - mRNA 2.33498 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 160 -- 166@LB@Position - sRNA 82 -- 88@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 82 -- 88@LB@ |
43 |
0.01649 |
0.29 |
ct_590 |
N/A |
-9.68 |
0.033714 |
159 -- 170 |
17 -- 28 |
|
|
_____________158__________171\n_____________|____________|\n5'-AGU...CAAUU____________AAAGG...UCA-3'\n______________UUAUUCCAUGGU\n______________:||||||||||:\n______________GAUAAGGUACCG\n3'-UUU...UCUUC____________CAAUC...GAA-5'\n_____________|____________|\n_____________29___________16\n |
164 -- 170 |
17 -- 23 |
-16.2126 kcal/mol |
1.90936 kcal/mol |
4.62088 kcal/mol |
158 171@LB@ | |@LB@5'-AGU...CAAUU AAAGG...UCA-3'@LB@ UUAUUCCAUGGU@LB@ :||||||||||:@LB@ GAUAAGGUACCG@LB@3'-UUU...UCUUC CAAUC...GAA-5'@LB@ | |@LB@ 29 16@LB@@LB@@LB@Energy -9.68 kcal/mol@LB@Hybridization Energy -16.2126 kcal/mol@LB@Unfolding Energy - mRNA 1.90936 kcal/mol@LB@Unfolding Energy - sRNA 4.62088 kcal/mol@LB@@LB@Position - mRNA 159 -- 170@LB@Position - sRNA 17 -- 28@LB@Position Seed - mRNA 164 -- 170@LB@Position Seed - sRNA 17 -- 23@LB@ |
45 |
0.01671 |
0.29 |
ct_469 |
N/A |
-9.81 |
0.031394 |
4 -- 20 |
17 -- 35 |
|
|
_____________3___________________21\n_____________|___________________|\n________5'-AUU___________________AACCU...UCU-3'\n______________UCAGAAGCU_UUUC_UGGU\n______________|||||||||_||:|_|||:\n______________AGUCUUCGA_AAGG_ACCG\n3'-UUU...AUCUC_________U____U____CAAUC...GAA-5'\n_____________|___________________|\n_____________36__________________16\n |
6 -- 12 |
27 -- 33 |
-19.4129 kcal/mol |
4.62874 kcal/mol |
4.9781 kcal/mol |
3 21@LB@ | |@LB@ 5'-AUU AACCU...UCU-3'@LB@ UCAGAAGCU UUUC UGGU@LB@ ||||||||| ||:| |||:@LB@ AGUCUUCGA AAGG ACCG@LB@3'-UUU...AUCUC U U CAAUC...GAA-5'@LB@ | |@LB@ 36 16@LB@@LB@@LB@Energy -9.81 kcal/mol@LB@Hybridization Energy -19.4129 kcal/mol@LB@Unfolding Energy - mRNA 4.62874 kcal/mol@LB@Unfolding Energy - sRNA 4.9781 kcal/mol@LB@@LB@Position - mRNA 4 -- 20@LB@Position - sRNA 17 -- 35@LB@Position Seed - mRNA 6 -- 12@LB@Position Seed - sRNA 27 -- 33@LB@ |
46 |
0.01681 |
0.29 |
ct_425 |
N/A |
-8.97 |
0.050526 |
259 -- 284 |
2 -- 23 |
|
|
_____________258_________________________285\n_____________|___________________________|\n5'-CUU...UUCUA__________UC_____UUCU______AAUUU...AAG-3'\n______________CC_UGGCGUU__GAAUA____UCAGCU\n______________||_|||||||__|||||____:||:||\n______________GG_ACCGCAA__CUUAU____GGUUGA\n3'-UUU...GAUAA__U_______U________________A-5'\n_____________|___________________________|\n_____________24__________________________1\n |
261 -- 267 |
14 -- 20 |
-21.0816 kcal/mol |
4.01638 kcal/mol |
8.09761 kcal/mol |
258 285@LB@ | |@LB@5'-CUU...UUCUA UC UUCU AAUUU...AAG-3'@LB@ CC UGGCGUU GAAUA UCAGCU@LB@ || ||||||| ||||| :||:||@LB@ GG ACCGCAA CUUAU GGUUGA@LB@3'-UUU...GAUAA U U A-5'@LB@ | |@LB@ 24 1@LB@@LB@@LB@Energy -8.97 kcal/mol@LB@Hybridization Energy -21.0816 kcal/mol@LB@Unfolding Energy - mRNA 4.01638 kcal/mol@LB@Unfolding Energy - sRNA 8.09761 kcal/mol@LB@@LB@Position - mRNA 259 -- 284@LB@Position - sRNA 2 -- 23@LB@Position Seed - mRNA 261 -- 267@LB@Position Seed - sRNA 14 -- 20@LB@ |