26 |
0.006621 |
0.2093 |
ct_267 |
ihfA |
-8.59 |
0.062448 |
193 -- 205 |
17 -- 31 |
DNA-binding protein HU |
|
_____________192_____________206\n_____________|_______________|\n5'-UAA...GCAAC_______________AACGA...AUA-3'\n______________AAGCUA__CCAUGGC\n______________||||||__|||||||\n______________UUCGAU__GGUACCG\n3'-UUU...CAGUC______AA_______CAAUC...GAA-5'\n_____________|_______________|\n_____________32______________16\n |
199 -- 205 |
17 -- 23 |
-17.4173 kcal/mol |
3.97125 kcal/mol |
4.86101 kcal/mol |
192 206@LB@ | |@LB@5'-UAA...GCAAC AACGA...AUA-3'@LB@ AAGCUA CCAUGGC@LB@ |||||| |||||||@LB@ UUCGAU GGUACCG@LB@3'-UUU...CAGUC AA CAAUC...GAA-5'@LB@ | |@LB@ 32 16@LB@@LB@@LB@Energy -8.59 kcal/mol@LB@Hybridization Energy -17.4173 kcal/mol@LB@Unfolding Energy - mRNA 3.97125 kcal/mol@LB@Unfolding Energy - sRNA 4.86101 kcal/mol@LB@@LB@Position - mRNA 193 -- 205@LB@Position - sRNA 17 -- 31@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 17 -- 23@LB@ |
87 |
0.03104 |
0.29 |
ct_437 |
fusA |
-5.85 |
0.250219 |
118 -- 125 |
79 -- 86 |
elongation factor G |
|
_____________117______126\n_____________|________|\n5'-AUC...AUCGC________AGCAA...UCU-3'\n______________AUGGCUGA\n______________|:||||:|\n______________UGCCGAUU\n3'-UUU...CUCUA________GAGGU...GAA-5'\n_____________|________|\n_____________87_______78\n |
119 -- 125 |
79 -- 85 |
-8.84241 kcal/mol |
1.89322 kcal/mol |
1.09752 kcal/mol |
117 126@LB@ | |@LB@5'-AUC...AUCGC AGCAA...UCU-3'@LB@ AUGGCUGA@LB@ |:||||:|@LB@ UGCCGAUU@LB@3'-UUU...CUCUA GAGGU...GAA-5'@LB@ | |@LB@ 87 78@LB@@LB@@LB@Energy -5.85 kcal/mol@LB@Hybridization Energy -8.84241 kcal/mol@LB@Unfolding Energy - mRNA 1.89322 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 118 -- 125@LB@Position - sRNA 79 -- 86@LB@Position Seed - mRNA 119 -- 125@LB@Position Seed - sRNA 79 -- 85@LB@ |
56 |
0.02215 |
0.29 |
ct_104 |
fabI |
-6.34 |
0.199539 |
263 -- 271 |
80 -- 88 |
enoyl-(acyl carrier protein) reductase |
|
_____________262_______272\n_____________|_________|\n5'-UUU...AACGG_________GGGCA...CAG-3'\n______________GUAUGGCUG\n______________:||:||||:\n______________UAUGCCGAU\n3'-UUU...GCCUC_________UGAGG...GAA-5'\n_____________|_________|\n_____________89________79\n |
265 -- 271 |
80 -- 86 |
-10.7973 kcal/mol |
3.36368 kcal/mol |
1.09753 kcal/mol |
262 272@LB@ | |@LB@5'-UUU...AACGG GGGCA...CAG-3'@LB@ GUAUGGCUG@LB@ :||:||||:@LB@ UAUGCCGAU@LB@3'-UUU...GCCUC UGAGG...GAA-5'@LB@ | |@LB@ 89 79@LB@@LB@@LB@Energy -6.34 kcal/mol@LB@Hybridization Energy -10.7973 kcal/mol@LB@Unfolding Energy - mRNA 3.36368 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 263 -- 271@LB@Position - sRNA 80 -- 88@LB@Position Seed - mRNA 265 -- 271@LB@Position Seed - sRNA 80 -- 86@LB@ |
61 |
0.02387 |
0.29 |
ct_628 |
ispA |
-7.51 |
0.111028 |
11 -- 52 |
17 -- 56 |
farnesyl diphosphate synthase |
|
_____________10__________________________________________53\n_____________|___________________________________________|\n5'-UUC...GAGAG_G____AA___A_____GAAAA________________UA___AGAGG...UAG-3'\n______________C_UUGU__UAC_AAACG_____AGUUAGGAGCU_UUCC__GGU\n______________|_:|||__|||_||||:_____|||:||:||||_||||__||:\n______________G_GACA__AUG_UUUGU_____UCAGUCUUCGA_AAGG__CCG\n3'-UUU...AAGGG_G____C__________GAUC____________U____UA___CAAUC...GAA-5'\n_____________|___________________________________________|\n_____________57__________________________________________16\n |
36 -- 42 |
28 -- 34 |
-30.6817 kcal/mol |
10.2369 kcal/mol |
12.9359 kcal/mol |
10 53@LB@ | |@LB@5'-UUC...GAGAG G AA A GAAAA UA AGAGG...UAG-3'@LB@ C UUGU UAC AAACG AGUUAGGAGCU UUCC GGU@LB@ | :||| ||| ||||: |||:||:|||| |||| ||:@LB@ G GACA AUG UUUGU UCAGUCUUCGA AAGG CCG@LB@3'-UUU...AAGGG G C GAUC U UA CAAUC...GAA-5'@LB@ | |@LB@ 57 16@LB@@LB@@LB@Energy -7.51 kcal/mol@LB@Hybridization Energy -30.6817 kcal/mol@LB@Unfolding Energy - mRNA 10.2369 kcal/mol@LB@Unfolding Energy - sRNA 12.9359 kcal/mol@LB@@LB@Position - mRNA 11 -- 52@LB@Position - sRNA 17 -- 56@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 28 -- 34@LB@ |
133 |
0.05414 |
0.3262 |
ct_059 |
fer |
-7.78 |
0.096344 |
200 -- 207 |
80 -- 87 |
ferredoxin |
|
_____________199______208\n_____________|________|\n5'-UUC...AGUCC________AGCUC...CUU-3'\n______________UAUGGCUA\n______________||:|||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
200 -- 206 |
81 -- 87 |
-10.7757 kcal/mol |
1.8981 kcal/mol |
1.09752 kcal/mol |
199 208@LB@ | |@LB@5'-UUC...AGUCC AGCUC...CUU-3'@LB@ UAUGGCUA@LB@ ||:|||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -7.78 kcal/mol@LB@Hybridization Energy -10.7757 kcal/mol@LB@Unfolding Energy - mRNA 1.8981 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 200 -- 207@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 81 -- 87@LB@ |
27 |
0.007389 |
0.2199 |
ct_855 |
fumC |
-7.16 |
0.132975 |
201 -- 207 |
82 -- 88 |
fumarate hydratase |
|
_____________200_____208\n_____________|_______|\n5'-AUA...AGCAU_______AAGAG...GUA-3'\n______________AUGCGGC\n______________||:||||\n______________UAUGCCG\n3'-UUU...GCCUC_______AUUGA...GAA-5'\n_____________|_______|\n_____________89______81\n |
201 -- 207 |
82 -- 88 |
-10.3037 kcal/mol |
2.04792 kcal/mol |
1.09753 kcal/mol |
200 208@LB@ | |@LB@5'-AUA...AGCAU AAGAG...GUA-3'@LB@ AUGCGGC@LB@ ||:||||@LB@ UAUGCCG@LB@3'-UUU...GCCUC AUUGA...GAA-5'@LB@ | |@LB@ 89 81@LB@@LB@@LB@Energy -7.16 kcal/mol@LB@Hybridization Energy -10.3037 kcal/mol@LB@Unfolding Energy - mRNA 2.04792 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 201 -- 207@LB@Position - sRNA 82 -- 88@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 82 -- 88@LB@ |
81 |
0.02893 |
0.29 |
ct_185 |
zwf |
-6.95 |
0.147965 |
38 -- 47 |
51 -- 60 |
glucose-6-phosphate 1-dehydrogenase |
|
_____________37_________48\n_____________|__________|\n5'-AAG...GCCUG__________AUCGU...UUU-3'\n______________UCCUCCCUGU\n______________|||:||||||\n______________AGGGGGGACA\n3'-UUU...ACUGA__________CAUGU...GAA-5'\n_____________|__________|\n_____________61_________50\n |
41 -- 47 |
51 -- 57 |
-17.9011 kcal/mol |
1.87917 kcal/mol |
9.07545 kcal/mol |
37 48@LB@ | |@LB@5'-AAG...GCCUG AUCGU...UUU-3'@LB@ UCCUCCCUGU@LB@ |||:||||||@LB@ AGGGGGGACA@LB@3'-UUU...ACUGA CAUGU...GAA-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -6.95 kcal/mol@LB@Hybridization Energy -17.9011 kcal/mol@LB@Unfolding Energy - mRNA 1.87917 kcal/mol@LB@Unfolding Energy - sRNA 9.07545 kcal/mol@LB@@LB@Position - mRNA 38 -- 47@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 51 -- 57@LB@ |
106 |
0.04101 |
0.3134 |
ct_445 |
gltX |
-7.36 |
0.119711 |
199 -- 233 |
6 -- 32 |
glutamate--tRNA ligase |
|
_____________198__________________________________234\n_____________|____________________________________|\n5'-UUU...GUAGC___U_A________AAA__UAC__________A___CCUUC...CAA-3'\n______________GAA_G_CUG_UCCA___UG___GCGUUAGAGU_GCC\n______________|||_|_||:_||||___||___||||||||:|_:||\n______________CUU_C_GAU_AGGU___AC___CGCAAUCUUA_UGG\n3'-UUU...UCAGU_________A__________________________UUGAA-5'\n_____________|____________________________________|\n_____________33___________________________________5\n |
220 -- 226 |
12 -- 18 |
-22.1489 kcal/mol |
6.20636 kcal/mol |
8.57923 kcal/mol |
198 234@LB@ | |@LB@5'-UUU...GUAGC U A AAA UAC A CCUUC...CAA-3'@LB@ GAA G CUG UCCA UG GCGUUAGAGU GCC@LB@ ||| | ||: |||| || ||||||||:| :||@LB@ CUU C GAU AGGU AC CGCAAUCUUA UGG@LB@3'-UUU...UCAGU A UUGAA-5'@LB@ | |@LB@ 33 5@LB@@LB@@LB@Energy -7.36 kcal/mol@LB@Hybridization Energy -22.1489 kcal/mol@LB@Unfolding Energy - mRNA 6.20636 kcal/mol@LB@Unfolding Energy - sRNA 8.57923 kcal/mol@LB@@LB@Position - mRNA 199 -- 233@LB@Position - sRNA 6 -- 32@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 12 -- 18@LB@ |
7 |
0.0007305 |
0.07962 |
ct_505 |
gapA |
-11.17 |
0.013986 |
23 -- 47 |
19 -- 39 |
glyceraldehyde-3-phosphate dehydrogenase |
|
_____________22________________________48\n_____________|_________________________|\n5'-GUC...AUAGA______AUUG___________G___UGUUA...AUU-3'\n______________AGAGUC____GGAAGUUAUUU_AUG\n______________||||||____:||||:||||:_|||\n______________UCUCAG____UCUUCGAUAAG_UAC\n3'-UUU...UGUGA_____________________G___CGCAA...GAA-5'\n_____________|_________________________|\n_____________40________________________18\n |
34 -- 40 |
26 -- 32 |
-23.0041 kcal/mol |
2.2627 kcal/mol |
9.5668 kcal/mol |
22 48@LB@ | |@LB@5'-GUC...AUAGA AUUG G UGUUA...AUU-3'@LB@ AGAGUC GGAAGUUAUUU AUG@LB@ |||||| :||||:||||: |||@LB@ UCUCAG UCUUCGAUAAG UAC@LB@3'-UUU...UGUGA G CGCAA...GAA-5'@LB@ | |@LB@ 40 18@LB@@LB@@LB@Energy -11.17 kcal/mol@LB@Hybridization Energy -23.0041 kcal/mol@LB@Unfolding Energy - mRNA 2.2627 kcal/mol@LB@Unfolding Energy - sRNA 9.5668 kcal/mol@LB@@LB@Position - mRNA 23 -- 47@LB@Position - sRNA 19 -- 39@LB@Position Seed - mRNA 34 -- 40@LB@Position Seed - sRNA 26 -- 32@LB@ |
60 |
0.02363 |
0.29 |
ct_796 |
glyQ |
-6.44 |
0.189870 |
236 -- 248 |
21 -- 33 |
glycine--tRNA ligase |
|
_____________235___________249\n_____________|_____________|\n5'-UAG...AUGAU__C__________AACUU...AAG-3'\n______________GG_AGCUAUUCUA\n______________:|_||||||||:|\n______________UC_UCGAUAAGGU\n3'-UUU...CUCAG__U__________ACCGC...GAA-5'\n_____________|_____________|\n_____________34____________20\n |
241 -- 247 |
22 -- 28 |
-13.5001 kcal/mol |
2.33043 kcal/mol |
4.73034 kcal/mol |
235 249@LB@ | |@LB@5'-UAG...AUGAU C AACUU...AAG-3'@LB@ GG AGCUAUUCUA@LB@ :| ||||||||:|@LB@ UC UCGAUAAGGU@LB@3'-UUU...CUCAG U ACCGC...GAA-5'@LB@ | |@LB@ 34 20@LB@@LB@@LB@Energy -6.44 kcal/mol@LB@Hybridization Energy -13.5001 kcal/mol@LB@Unfolding Energy - mRNA 2.33043 kcal/mol@LB@Unfolding Energy - sRNA 4.73034 kcal/mol@LB@@LB@Position - mRNA 236 -- 248@LB@Position - sRNA 21 -- 33@LB@Position Seed - mRNA 241 -- 247@LB@Position Seed - sRNA 22 -- 28@LB@ |