49 |
0.01139 |
0.599 |
lmo0181 |
N/A |
-18.25 |
0.023109 |
147 -- 168 |
157 -- 179 |
sugar ABC transporter substrate-binding protein |
|
_____________146________________169\n_____________|__________________|\n5'-AAG...AAUGG_______CG_________AAUAA...UUA-3'\n______________CAAUGAG__GAAUGAAAG\n______________|||||||__||||||||:\n______________GUUACUC__CUUACUUUU\n3'-GUU...UGCCG_______UA_________GUUUA...GGA-5'\n_____________|__________________|\n_____________180________________156\n |
162 -- 168 |
157 -- 163 |
-17.3464 kcal/mol |
2.46271 kcal/mol |
0.933292 kcal/mol |
146 169@LB@ | |@LB@5'-AAG...AAUGG CG AAUAA...UUA-3'@LB@ CAAUGAG GAAUGAAAG@LB@ ||||||| ||||||||:@LB@ GUUACUC CUUACUUUU@LB@3'-GUU...UGCCG UA GUUUA...GGA-5'@LB@ | |@LB@ 180 156@LB@@LB@@LB@Energy -18.25 kcal/mol@LB@Hybridization Energy -17.3464 kcal/mol@LB@Unfolding Energy - mRNA 2.46271 kcal/mol@LB@Unfolding Energy - sRNA 0.933292 kcal/mol@LB@@LB@Position - mRNA 147 -- 168@LB@Position - sRNA 157 -- 179@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 157 -- 163@LB@ |
50 |
0.01167 |
0.599 |
lmo0850 |
N/A |
-18.65 |
0.019190 |
166 -- 190 |
141 -- 165 |
|
|
_____________165________________________191\n_____________|__________________________|\n5'-UGG...AAAGA____AAAAUAAAAA____________AUUUU...AAU-3'\n______________GAGA__________GAAUGAAAACAA\n______________||||__________||||||||||||\n______________CUCU__________CUUACUUUUGUU\n3'-GUU...GGUUA____A_____________________UAUUA...GGA-5'\n_____________|__________________________|\n_____________166________________________140\n |
171 -- 177 |
154 -- 160 |
-14.3235 kcal/mol |
1.0644 kcal/mol |
0.933796 kcal/mol |
165 191@LB@ | |@LB@5'-UGG...AAAGA AAAAUAAAAA AUUUU...AAU-3'@LB@ GAGA GAAUGAAAACAA@LB@ |||| ||||||||||||@LB@ CUCU CUUACUUUUGUU@LB@3'-GUU...GGUUA A UAUUA...GGA-5'@LB@ | |@LB@ 166 140@LB@@LB@@LB@Energy -18.65 kcal/mol@LB@Hybridization Energy -14.3235 kcal/mol@LB@Unfolding Energy - mRNA 1.0644 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 166 -- 190@LB@Position - sRNA 141 -- 165@LB@Position Seed - mRNA 171 -- 177@LB@Position Seed - sRNA 154 -- 160@LB@ |
51 |
0.01168 |
0.599 |
lmo0105 |
N/A |
-17.88 |
0.027496 |
155 -- 205 |
153 -- 201 |
chitinase B |
|
_____________154_________________206\n_____________|___________________|\n5'-ACC...GUGAA_________AA________AAAAG...AAA-3'\n______________GAGAUGAAU__GAAGAUGA\n______________|||||||||__|||:|::|\n______________CUCUACUUA__CUUUUGUU\n3'-GUU...GGUUA___________________UAUUA...GGA-5'\n_____________|___________________|\n_____________202_________________152\n |
197 -- 203 |
155 -- 161 |
-15.8376 kcal/mol |
2.73398 kcal/mol |
0.933796 kcal/mol |
154 206@LB@ | |@LB@5'-ACC...GUGAA AA AAAAG...AAA-3'@LB@ GAGAUGAAU GAAGAUGA@LB@ ||||||||| |||:|::|@LB@ CUCUACUUA CUUUUGUU@LB@3'-GUU...GGUUA UAUUA...GGA-5'@LB@ | |@LB@ 202 152@LB@@LB@@LB@Energy -17.88 kcal/mol@LB@Hybridization Energy -15.8376 kcal/mol@LB@Unfolding Energy - mRNA 2.73398 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 155 -- 205@LB@Position - sRNA 153 -- 201@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 155 -- 161@LB@ |
52 |
0.01176 |
0.599 |
lmo0302 |
N/A |
-19.32 |
0.013869 |
143 -- 287 |
107 -- 220 |
lmo0302 |
|
_____________142________________288\n_____________|__________________|\n5'-CGA...CAUAG_________A__U_____AAAAA...AUA-3'\n______________GAGAUGAAU_GA_GAUGA\n______________|||||||||_||_:|::|\n______________CUCUACUUA_CU_UUGUU\n3'-GUU...GGUUA____________U_____UAUUA...GGA-5'\n_____________|__________________|\n_____________221________________106\n |
189 -- 195 |
162 -- 168 |
-14.2485 kcal/mol |
1.08239 kcal/mol |
0.933796 kcal/mol |
142 288@LB@ | |@LB@5'-CGA...CAUAG A U AAAAA...AUA-3'@LB@ GAGAUGAAU GA GAUGA@LB@ ||||||||| || :|::|@LB@ CUCUACUUA CU UUGUU@LB@3'-GUU...GGUUA U UAUUA...GGA-5'@LB@ | |@LB@ 221 106@LB@@LB@@LB@Energy -19.32 kcal/mol@LB@Hybridization Energy -14.2485 kcal/mol@LB@Unfolding Energy - mRNA 1.08239 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 143 -- 287@LB@Position - sRNA 107 -- 220@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 162 -- 168@LB@ |
53 |
0.0118 |
0.599 |
lmo2394 |
N/A |
-15.56 |
0.076801 |
20 -- 80 |
100 -- 170 |
|
|
_____________19_____________________________________81\n_____________|______________________________________|\n5'-GGA...UUUUC________GUG___GG____________A_________AUAGU...AAA-3'\n______________GAUAGAUG___GAU________AUUUUG_UGGAGGAUG\n______________:|:|||||___||:________|||:|:_||||:||||\n______________UUGUCUAC___CUG________UAAGAU_ACCUUCUAC\n3'-GUU...CAGAU________AGA___AUCAACGG______A_________CUAUG...GGA-5'\n_____________|______________________________________|\n_____________171____________________________________99\n |
189 -- 195 |
97 -- 103 |
-26.5698 kcal/mol |
4.81204 kcal/mol |
9.44565 kcal/mol |
19 81@LB@ | |@LB@5'-GGA...UUUUC GUG GG A AUAGU...AAA-3'@LB@ GAUAGAUG GAU AUUUUG UGGAGGAUG@LB@ :|:||||| ||: |||:|: ||||:||||@LB@ UUGUCUAC CUG UAAGAU ACCUUCUAC@LB@3'-GUU...CAGAU AGA AUCAACGG A CUAUG...GGA-5'@LB@ | |@LB@ 171 99@LB@@LB@@LB@Energy -15.56 kcal/mol@LB@Hybridization Energy -26.5698 kcal/mol@LB@Unfolding Energy - mRNA 4.81204 kcal/mol@LB@Unfolding Energy - sRNA 9.44565 kcal/mol@LB@@LB@Position - mRNA 20 -- 80@LB@Position - sRNA 100 -- 170@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 97 -- 103@LB@ |
54 |
0.01218 |
0.6043 |
lmo0065 |
N/A |
-17.22 |
0.037093 |
77 -- 100 |
146 -- 171 |
lmo0065 |
|
_____________76_________________________101\n_____________|__________________________|\n5'-GUA...GCAUU____________________U_____UGGUA...CUA-3'\n______________UGAGAUG___GAAGACAAAU_AAUGA\n______________|||||||___|||:||||||_|||||\n______________ACUCUAC___CUUUUGUUUA_UUACU\n3'-GUU...CGGUU_______UUA________________AAAAC...GGA-5'\n_____________|__________________________|\n_____________172________________________145\n |
87 -- 93 |
152 -- 158 |
-20.9762 kcal/mol |
2.94176 kcal/mol |
5.93625 kcal/mol |
76 101@LB@ | |@LB@5'-GUA...GCAUU U UGGUA...CUA-3'@LB@ UGAGAUG GAAGACAAAU AAUGA@LB@ ||||||| |||:|||||| |||||@LB@ ACUCUAC CUUUUGUUUA UUACU@LB@3'-GUU...CGGUU UUA AAAAC...GGA-5'@LB@ | |@LB@ 172 145@LB@@LB@@LB@Energy -17.22 kcal/mol@LB@Hybridization Energy -20.9762 kcal/mol@LB@Unfolding Energy - mRNA 2.94176 kcal/mol@LB@Unfolding Energy - sRNA 5.93625 kcal/mol@LB@@LB@Position - mRNA 77 -- 100@LB@Position - sRNA 146 -- 171@LB@Position Seed - mRNA 87 -- 93@LB@Position Seed - sRNA 152 -- 158@LB@ |
55 |
0.01256 |
0.6043 |
lmo1725 |
N/A |
-17.74 |
0.029271 |
269 -- 300 |
152 -- 185 |
GntR family tramscriptional regulator |
|
_____________268______________________________301\n_____________|________________________________|\n5'-CAG...CAAAU___________G_______A___A________GU-3'\n______________GAUUACA_GGC_AAUG_GA_GGG_GAGGAUAA\n______________:|:||||_|||_||||_||_|::_||::|:||\n______________UUGAUGU_CCG_UUAC_CU_CUU_CUUUUGUU\n3'-GUU...UGUAC_______G___G____U__A___A________UAUUA...GGA-5'\n_____________|________________________________|\n_____________186______________________________151\n |
291 -- 297 |
155 -- 161 |
-25.158 kcal/mol |
5.52494 kcal/mol |
9.66022 kcal/mol |
268 301@LB@ | |@LB@5'-CAG...CAAAU G A A GU-3'@LB@ GAUUACA GGC AAUG GA GGG GAGGAUAA@LB@ :|:|||| ||| |||| || |:: ||::|:||@LB@ UUGAUGU CCG UUAC CU CUU CUUUUGUU@LB@3'-GUU...UGUAC G G U A A UAUUA...GGA-5'@LB@ | |@LB@ 186 151@LB@@LB@@LB@Energy -17.74 kcal/mol@LB@Hybridization Energy -25.158 kcal/mol@LB@Unfolding Energy - mRNA 5.52494 kcal/mol@LB@Unfolding Energy - sRNA 9.66022 kcal/mol@LB@@LB@Position - mRNA 269 -- 300@LB@Position - sRNA 152 -- 185@LB@Position Seed - mRNA 291 -- 297@LB@Position Seed - sRNA 155 -- 161@LB@ |
56 |
0.01257 |
0.6043 |
lmo2205 |
N/A |
-16.72 |
0.046467 |
190 -- 249 |
147 -- 203 |
phosphoglyceromutase |
|
_____________189_____________________250\n_____________|_______________________|\n5'-AUG...GCGAA____GAA________________AAUUA...UGG-3'\n______________AAUG___GGAUGAG_GAAGAUGA\n______________||||___:|||||:_|||:|::|\n______________UUAC___UCUACUU_CUUUUGUU\n3'-GUU...GCCGG______________A________UAUUA...GGA-5'\n_____________|_______________________|\n_____________204_____________________146\n |
197 -- 203 |
155 -- 161 |
-13.1674 kcal/mol |
1.25432 kcal/mol |
0.959215 kcal/mol |
189 250@LB@ | |@LB@5'-AUG...GCGAA GAA AAUUA...UGG-3'@LB@ AAUG GGAUGAG GAAGAUGA@LB@ |||| :|||||: |||:|::|@LB@ UUAC UCUACUU CUUUUGUU@LB@3'-GUU...GCCGG A UAUUA...GGA-5'@LB@ | |@LB@ 204 146@LB@@LB@@LB@Energy -16.72 kcal/mol@LB@Hybridization Energy -13.1674 kcal/mol@LB@Unfolding Energy - mRNA 1.25432 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 190 -- 249@LB@Position - sRNA 147 -- 203@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 155 -- 161@LB@ |
57 |
0.01283 |
0.6057 |
lmo2379 |
N/A |
-18.13 |
0.024463 |
194 -- 217 |
150 -- 173 |
monovalent cation/H+ antiporter subunit B |
|
_____________193__________________218\n_____________|____________________|\n5'-GUA...AACGA_______AU___________AUGAC...AUA-3'\n______________GGUGAGA__GAUGAAAACGA\n______________::|||||__:||||||||:|\n______________UUACUCU__UUACUUUUGUU\n3'-GUU...GCCGG_______AC___________UAUUA...GGA-5'\n_____________|____________________|\n_____________174__________________149\n |
207 -- 213 |
154 -- 160 |
-18.1864 kcal/mol |
2.62553 kcal/mol |
0.959215 kcal/mol |
193 218@LB@ | |@LB@5'-GUA...AACGA AU AUGAC...AUA-3'@LB@ GGUGAGA GAUGAAAACGA@LB@ ::||||| :||||||||:|@LB@ UUACUCU UUACUUUUGUU@LB@3'-GUU...GCCGG AC UAUUA...GGA-5'@LB@ | |@LB@ 174 149@LB@@LB@@LB@Energy -18.13 kcal/mol@LB@Hybridization Energy -18.1864 kcal/mol@LB@Unfolding Energy - mRNA 2.62553 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 194 -- 217@LB@Position - sRNA 150 -- 173@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 154 -- 160@LB@ |
58 |
0.0137 |
0.6248 |
lmo1724 |
N/A |
-17.96 |
0.026530 |
144 -- 212 |
156 -- 211 |
ABC transporter ATP-binding protein |
|
_____________143__________213\n_____________|____________|\n5'-UUA...CAACC____________CUGAU...UCA-3'\n______________AUGAAUGAAAAC\n______________||||||||||||\n______________UACUUACUUUUG\n3'-GUU...UACUC____________UUUAU...GGA-5'\n_____________|____________|\n_____________212__________155\n |
206 -- 212 |
156 -- 162 |
-13.4321 kcal/mol |
1.37849 kcal/mol |
0.849227 kcal/mol |
143 213@LB@ | |@LB@5'-UUA...CAACC CUGAU...UCA-3'@LB@ AUGAAUGAAAAC@LB@ ||||||||||||@LB@ UACUUACUUUUG@LB@3'-GUU...UACUC UUUAU...GGA-5'@LB@ | |@LB@ 212 155@LB@@LB@@LB@Energy -17.96 kcal/mol@LB@Hybridization Energy -13.4321 kcal/mol@LB@Unfolding Energy - mRNA 1.37849 kcal/mol@LB@Unfolding Energy - sRNA 0.849227 kcal/mol@LB@@LB@Position - mRNA 144 -- 212@LB@Position - sRNA 156 -- 211@LB@Position Seed - mRNA 206 -- 212@LB@Position Seed - sRNA 156 -- 162@LB@ |