Annotation Cluster 1 Enrichment Score: 1.41998618669 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0043169~cation binding 25 12.6262626263 0.0212423499187 985901,984805,985257,986398,984770,985602,987148,987204,987149,984962,987026,985554,986634,986008,985876,987008,987946,986973,985661,985323,986170,986521,987360,987231,985781 109 222 1498 1.547648566 0.991671576228 0.991671576228 23.9600427549 GOTERM_MF_FAT GO:0043167~ion binding 25 12.6262626263 0.0212423499187 985901,984805,985257,986398,984770,985602,987148,987204,987149,984962,987026,985554,986634,986008,985876,987008,987946,986973,985661,985323,986170,986521,987360,987231,985781 109 222 1498 1.547648566 0.991671576228 0.991671576228 23.9600427549 GOTERM_MF_FAT GO:0046872~metal ion binding 20 10.101010101 0.12179692471 985901,984805,985257,987148,985602,984770,987204,987149,984962,987026,985554,985876,987946,986973,985661,985323,986170,987360,987231,985781 109 201 1498 1.36747455384 1.0 0.999283165891 80.9263804846 Annotation Cluster 2 Enrichment Score: 1.03739090554 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009260~ribonucleotide biosynthetic process 8 4.0404040404 0.0558805105234 985876,985257,987149,985969,985323,985978,985967,985975 93 51 1335 2.25173940544 0.999999927937 0.99973155477 53.3643892624 GOTERM_BP_FAT GO:0009259~ribonucleotide metabolic process 8 4.0404040404 0.0610513293845 985876,985257,987149,985969,985323,985978,985967,985975 93 52 1335 2.20843672457 0.999999985018 0.997534775361 56.6411522091 GOTERM_BP_FAT GO:0009165~nucleotide biosynthetic process 9 4.54545454545 0.0896259983152 985876,987946,985257,987149,985969,985323,985978,985967,985975 93 68 1335 1.89990512334 0.999999999998 0.998785999012 71.2242413594 GOTERM_BP_FAT GO:0034404~nucleobase,nucleoside and nucleotide biosynthetic process 9 4.54545454545 0.145823657859 985876,987946,985257,987149,985969,985323,985978,985967,985975 93 76 1335 1.69991511036 1.0 0.998403282772 87.6423183721 GOTERM_BP_FAT GO:0034654~nucleobase,nucleoside,nucleotide and nucleic acid biosynthetic process 9 4.54545454545 0.145823657859 985876,987946,985257,987149,985969,985323,985978,985967,985975 93 76 1335 1.69991511036 1.0 0.998403282772 87.6423183721 Annotation Cluster 3 Enrichment Score: 0.985820034649 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0000156~two-component response regulator activity 5 2.52525252525 0.0355731522748 984408,987463,986126,987235,984890 109 18 1498 3.81753312946 0.999689506821 0.982379183354 37.0028060335 PIR_SUPERFAMILY PIRSF003173:response regulator,OmpR type 3 1.51515151515 0.0523695625204 984408,987463,987235 103 6 1577 7.65533980583 0.998049597753 0.998049597753 45.8649704738 INTERPRO IPR001789:Signal transduction response regulator,receiver region 4 2.0202020202 0.110835625009 984408,987463,986126,987235 170 17 2417 3.34532871972 1.0 0.999988747235 80.431681667 INTERPRO IPR001867:Signal transduction response regulator,C-terminal 3 1.51515151515 0.151181233948 984408,987463,987235 170 10 2417 4.26529411765 1.0 0.999997007447 89.7314541819 GOTERM_BP_FAT GO:0000160~two-component signal transduction system (phosphorelay) 5 2.52525252525 0.173783643597 984408,987463,986126,987235,984890 93 32 1335 2.24294354839 1.0 0.989430154913 92.0530711405 SMART SM00448:REC 4 2.0202020202 0.224229286933 984408,987463,986126,987235 44 17 441 2.35828877005 0.999961154993 0.999961154993 90.2013319233 Annotation Cluster 4 Enrichment Score: 0.930704535948 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS magnesium 7 3.53535353535 0.101334872386 985876,984805,985257,987149,986170,987026,985781 198 46 2792 2.14580588494 0.999977102454 0.971603620012 69.4531187143 GOTERM_MF_FAT GO:0000287~magnesium ion binding 7 3.53535353535 0.135778811596 985876,984805,985257,987149,986170,987026,985781 109 49 1498 1.96330275229 1.0 0.995588775616 84.4576990301 Annotation Cluster 5 Enrichment Score: 0.911581370405 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009260~ribonucleotide biosynthetic process 8 4.0404040404 0.0558805105234 985876,985257,987149,985969,985323,985978,985967,985975 93 51 1335 2.25173940544 0.999999927937 0.99973155477 53.3643892624 GOTERM_BP_FAT GO:0009259~ribonucleotide metabolic process 8 4.0404040404 0.0610513293845 985876,985257,987149,985969,985323,985978,985967,985975 93 52 1335 2.20843672457 0.999999985018 0.997534775361 56.6411522091 GOTERM_BP_FAT GO:0009152~purine ribonucleotide biosynthetic process 6 3.0303030303 0.157666276547 987149,985969,985323,985978,985967,985975 93 42 1335 2.05069124424 1.0 0.995713990828 89.7315943079 GOTERM_BP_FAT GO:0009150~purine ribonucleotide metabolic process 6 3.0303030303 0.169224611643 987149,985969,985323,985978,985967,985975 93 43 1335 2.00300075019 1.0 0.995019974201 91.4512640078 GOTERM_BP_FAT GO:0006164~purine nucleotide biosynthetic process 6 3.0303030303 0.181110281505 987149,985969,985323,985978,985967,985975 93 44 1335 1.95747800587 1.0 0.987670109925 92.9387258138 GOTERM_BP_FAT GO:0006163~purine nucleotide metabolic process 6 3.0303030303 0.205783639627 987149,985969,985323,985978,985967,985975 93 46 1335 1.87237026648 1.0 0.983729287593 95.2942539117 Annotation Cluster 6 Enrichment Score: 0.834830348314 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY lmh00230:Purine metabolism 5 2.52525252525 0.116360327241 985969,985978,985967,986943,985975 64 27 892 2.58101851852 0.999989916898 0.996824609903 74.1863942166 KEGG_PATHWAY lmf00230:Purine metabolism 5 2.52525252525 0.183879946798 985969,985978,985967,986943,985975 64 32 892 2.177734375 0.999999993789 0.97716372232 89.1874318824 Annotation Cluster 7 Enrichment Score: 0.817353318105 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY lmf02020:Two-component system 4 2.0202020202 0.083002827342 987148,987149,985706,984890 64 15 892 3.71666666667 0.999683609317 0.999683609317 61.2720738652 KEGG_PATHWAY lmh02020:Two-component system 3 1.51515151515 0.153214283546 987148,987149,985706 64 10 892 4.18125 0.999999808161 0.979071677111 83.8079513741 KEGG_PATHWAY lmo02020:Two-component system 5 2.52525252525 0.277682112677 984408,987148,987149,985706,984890 64 38 892 1.83388157895 1.0 0.993539148912 97.1592627001 Annotation Cluster 8 Enrichment Score: 0.803974688117 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR INTERPRO IPR006204:GHMP kinase 3 1.51515151515 0.0604855130363 984930,984924,987016 170 6 2417 7.10882352941 0.999999999969 0.999687019777 57.9533171857 INTERPRO IPR013750:GHMP kinase,C-terminal 3 1.51515151515 0.0604855130363 984930,984924,987016 170 6 2417 7.10882352941 0.999999999969 0.999687019777 57.9533171857 GOTERM_BP_FAT GO:0008299~isoprenoid biosynthetic process 3 1.51515151515 0.276859294563 984930,984924,987016 93 15 1335 2.87096774194 1.0 0.985212440287 98.6432306238 GOTERM_BP_FAT GO:0006720~isoprenoid metabolic process 3 1.51515151515 0.276859294563 984930,984924,987016 93 15 1335 2.87096774194 1.0 0.985212440287 98.6432306238 KEGG_PATHWAY lmo00900:Terpenoid backbone biosynthesis 3 1.51515151515 0.340647813822 984930,984924,987016 64 17 892 2.45955882353 1.0 0.996047734349 98.9533748543 Annotation Cluster 9 Enrichment Score: 0.802457405863 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS atp-binding 25 12.6262626263 0.059189450607 987830,985257,987148,987203,987020,987204,987149,986662,985677,984890,986011,985821,985969,985419,985514,986992,985781,984924,987016,985876,985752,987287,985323,985975,986435 198 246 2792 1.43302948181 0.997760155575 0.997760155575 49.196750996 SP_PIR_KEYWORDS nucleotide-binding 26 13.1313131313 0.0756220737703 987830,985257,987148,987203,987204,987020,987149,986662,985677,984890,986619,986011,985821,985969,985419,985514,986992,985781,984924,987016,985876,985752,987287,985323,985975,986435 198 265 2792 1.38349533067 0.999615446635 0.980389967757 58.2215341802 GOTERM_MF_FAT GO:0032559~adenyl ribonucleotide binding 27 13.6363636364 0.161877748127 987830,985257,987148,987203,984930,987020,987204,987149,986662,985677,984890,986011,985821,985969,985419,985514,986992,985781,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 299 1498 1.24101745881 1.0 0.996395940371 89.4895416878 GOTERM_MF_FAT GO:0005524~ATP binding 27 13.6363636364 0.161877748127 987830,985257,987148,987203,984930,987020,987204,987149,986662,985677,984890,986011,985821,985969,985419,985514,986992,985781,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 299 1498 1.24101745881 1.0 0.996395940371 89.4895416878 GOTERM_MF_FAT GO:0032553~ribonucleotide binding 29 14.6464646465 0.170702266079 987830,985257,987148,987203,984930,987204,987020,987149,986662,985677,984890,986619,986766,986011,985821,985969,985419,985514,986992,985781,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 327 1498 1.21880874225 1.0 0.994579309734 90.8171293283 GOTERM_MF_FAT GO:0032555~purine ribonucleotide binding 29 14.6464646465 0.170702266079 987830,985257,987148,987203,984930,987204,987020,987149,986662,985677,984890,986619,986766,986011,985821,985969,985419,985514,986992,985781,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 327 1498 1.21880874225 1.0 0.994579309734 90.8171293283 GOTERM_MF_FAT GO:0001883~purine nucleoside binding 28 14.1414141414 0.199914511774 987830,985257,987148,987203,984930,987020,987204,987149,986662,985677,984890,986011,985821,985969,985419,985514,986992,985781,984805,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 320 1498 1.20252293578 1.0 0.993082620993 94.1883729934 GOTERM_MF_FAT GO:0030554~adenyl nucleotide binding 28 14.1414141414 0.199914511774 987830,985257,987148,987203,984930,987020,987204,987149,986662,985677,984890,986011,985821,985969,985419,985514,986992,985781,984805,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 320 1498 1.20252293578 1.0 0.993082620993 94.1883729934 GOTERM_MF_FAT GO:0017076~purine nucleotide binding 30 15.1515151515 0.208087375268 987830,985257,987148,987203,984930,987204,987020,987149,985677,986662,984890,986619,986766,986011,985821,985969,985419,985514,986992,985781,984805,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 348 1498 1.18475166087 1.0 0.991170993048 94.9018566392 GOTERM_MF_FAT GO:0001882~nucleoside binding 28 14.1414141414 0.210109055272 987830,985257,987148,987203,984930,987020,987204,987149,986662,985677,984890,986011,985821,985969,985419,985514,986992,985781,984805,984924,987016,985876,985752,987287,985323,985975,984725,986435 109 322 1498 1.19505384922 1.0 0.987513062795 95.0654228303 GOTERM_MF_FAT GO:0000166~nucleotide binding 33 16.6666666667 0.24936966325 987830,985257,987203,987148,984930,987204,987020,987149,985677,986662,984890,986619,986766,984694,986011,985821,985969,985419,985514,986161,986992,985781,984805,984924,985948,987016,985876,985752,987287,985323,985975,984725,986435 109 396 1498 1.14525993884 1.0 0.985939474948 97.4249012186 Annotation Cluster 10 Enrichment Score: 0.708096812259 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR INTERPRO IPR002942:RNA-binding S4 3 1.51515151515 0.151181233948 985752,987967,987050 170 10 2417 4.26529411765 1.0 0.999997007447 89.7314541819 SMART SM00363:S4 3 1.51515151515 0.253693003255 985752,987967,987050 44 10 441 3.00681818182 0.999991745315 0.997126903161 93.1242809215 Annotation Cluster 11 Enrichment Score: 0.675212522557 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006281~DNA repair 7 3.53535353535 0.193766940896 987648,987203,987204,985627,986038,984699,985419 93 57 1335 1.76287492926 1.0 0.98772211023 94.2569350698 GOTERM_BP_FAT GO:0006974~response to DNA damage stimulus 7 3.53535353535 0.193766940896 987648,987203,987204,985627,986038,984699,985419 93 57 1335 1.76287492926 1.0 0.98772211023 94.2569350698 GOTERM_BP_FAT GO:0033554~cellular response to stress 7 3.53535353535 0.251074765986 987648,987203,987204,985627,986038,984699,985419 93 62 1335 1.62070759625 1.0 0.98711844017 97.8405118033 Annotation Cluster 12 Enrichment Score: 0.652822651148 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY lmf00250:Alanine,aspartate and glutamate metabolism 3 1.51515151515 0.153214283546 985876,985967,987914 64 10 892 4.18125 0.999999808161 0.979071677111 83.8079513741 KEGG_PATHWAY lmh00250:Alanine,aspartate and glutamate metabolism 3 1.51515151515 0.153214283546 985876,985967,987914 64 10 892 4.18125 0.999999808161 0.979071677111 83.8079513741 KEGG_PATHWAY lmo00250:Alanine,aspartate and glutamate metabolism 3 1.51515151515 0.46874164215 985876,985967,987914 64 22 892 1.90056818182 1.0 0.999359263241 99.9016466076 Annotation Cluster 13 Enrichment Score: 0.65224328978 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009156~ribonucleoside monophosphate biosynthetic process 3 1.51515151515 0.198060117349 985257,985978,985975 93 12 1335 3.58870967742 1.0 0.985130242202 94.6496327716 GOTERM_BP_FAT GO:0009161~ribonucleoside monophosphate metabolic process 3 1.51515151515 0.198060117349 985257,985978,985975 93 12 1335 3.58870967742 1.0 0.985130242202 94.6496327716 GOTERM_BP_FAT GO:0009124~nucleoside monophosphate biosynthetic process 3 1.51515151515 0.250447319816 985257,985978,985975 93 14 1335 3.07603686636 1.0 0.989749490474 97.816387851 GOTERM_BP_FAT GO:0009123~nucleoside monophosphate metabolic process 3 1.51515151515 0.250447319816 985257,985978,985975 93 14 1335 3.07603686636 1.0 0.989749490474 97.816387851 Annotation Cluster 14 Enrichment Score: 0.649502274721 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006631~fatty acid metabolic process 3 1.51515151515 0.224128830647 985913,985883,986992 93 13 1335 3.31265508685 1.0 0.986008240459 96.5486177476 GOTERM_BP_FAT GO:0006633~fatty acid biosynthetic process 3 1.51515151515 0.224128830647 985913,985883,986992 93 13 1335 3.31265508685 1.0 0.986008240459 96.5486177476 Annotation Cluster 15 Enrichment Score: 0.581629701379 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006526~arginine biosynthetic process 3 1.51515151515 0.147409870925 985876,984694,987914 93 10 1335 4.3064516129 1.0 0.996658313267 87.9432987648 SP_PIR_KEYWORDS arginine biosynthesis 3 1.51515151515 0.153470618007 985876,984694,987914 198 10 2792 4.2303030303 0.999999941896 0.964285816091 84.2647422114 GOTERM_BP_FAT GO:0006525~arginine metabolic process 3 1.51515151515 0.198060117349 985876,984694,987914 93 12 1335 3.58870967742 1.0 0.985130242202 94.6496327716 GOTERM_BP_FAT GO:0009084~glutamine family amino acid biosynthetic process 3 1.51515151515 0.380973830537 985876,984694,987914 93 19 1335 2.26655348048 1.0 0.993781890082 99.8274579516 GOTERM_BP_FAT GO:0009064~glutamine family amino acid metabolic process 3 1.51515151515 0.723781550564 985876,984694,987914 93 36 1335 1.19623655914 1.0 0.999843253865 99.9999961285 Annotation Cluster 16 Enrichment Score: 0.552201335921 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS septation 3 1.51515151515 0.153470618007 987023,987024,985608 198 10 2792 4.2303030303 0.999999941896 0.964285816091 84.2647422114 GOTERM_BP_FAT GO:0032506~cytokinetic process 3 1.51515151515 0.172419539854 987023,987024,985608 93 11 1335 3.91495601173 1.0 0.992704317433 91.8772454843 GOTERM_BP_FAT GO:0000917~barrier septum formation 3 1.51515151515 0.172419539854 987023,987024,985608 93 11 1335 3.91495601173 1.0 0.992704317433 91.8772454843 GOTERM_BP_FAT GO:0000910~cytokinesis 3 1.51515151515 0.276859294563 987023,987024,985608 93 15 1335 2.87096774194 1.0 0.985212440287 98.6432306238 SP_PIR_KEYWORDS cell cycle 4 2.0202020202 0.31622715865 987830,987023,987024,985608 198 28 2792 2.01443001443 1.0 0.977658183969 98.5289436067 SP_PIR_KEYWORDS cell division 4 2.0202020202 0.395513276082 987830,987023,987024,985608 198 32 2792 1.76262626263 1.0 0.984926189231 99.6254274995 GOTERM_BP_FAT GO:0051301~cell division 4 2.0202020202 0.457183041416 987830,987023,987024,985608 93 36 1335 1.59498207885 1.0 0.997583795975 99.9697992218 GOTERM_BP_FAT GO:0007049~cell cycle 4 2.0202020202 0.52927533411 987830,987023,987024,985608 93 40 1335 1.43548387097 1.0 0.998810526782 99.9954390302 Annotation Cluster 17 Enrichment Score: 0.514066266928 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009057~macromolecule catabolic process 4 2.0202020202 0.137838002726 984639,985099,986713,986634 93 19 1335 3.0220713073 1.0 0.999793136579 86.018693175 GOTERM_BP_FAT GO:0000272~polysaccharide catabolic process 3 1.51515151515 0.147409870925 984639,986713,986634 93 10 1335 4.3064516129 1.0 0.996658313267 87.9432987648 GOTERM_BP_FAT GO:0006026~aminoglycan catabolic process 3 1.51515151515 0.147409870925 984639,986713,986634 93 10 1335 4.3064516129 1.0 0.996658313267 87.9432987648 GOTERM_BP_FAT GO:0006022~aminoglycan metabolic process 4 2.0202020202 0.361608817852 984639,986713,987026,986634 93 31 1335 1.85223725286 1.0 0.9941089338 99.7403666769 GOTERM_BP_FAT GO:0005976~polysaccharide metabolic process 4 2.0202020202 0.59588090994 984639,986713,987026,986634 93 44 1335 1.30498533724 1.0 0.999390997053 99.9993972871 GOTERM_BP_FAT GO:0000270~peptidoglycan metabolic process 3 1.51515151515 0.624967986914 984639,986713,987026 93 30 1335 1.43548387097 1.0 0.999489890522 99.9997762511 GOTERM_BP_FAT GO:0030203~glycosaminoglycan metabolic process 3 1.51515151515 0.624967986914 984639,986713,987026 93 30 1335 1.43548387097 1.0 0.999489890522 99.9997762511 Annotation Cluster 18 Enrichment Score: 0.506618120732 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0046394~carboxylic acid biosynthetic process 10 5.05050505051 0.273947092795 985876,984805,984694,985913,987360,985706,987983,985883,986992,987914 93 103 1335 1.39367366113 1.0 0.987220312586 98.568930883 GOTERM_BP_FAT GO:0016053~organic acid biosynthetic process 10 5.05050505051 0.354076466522 985876,984805,984694,985913,987360,985706,987983,985883,986992,987914 93 111 1335 1.29322871258 1.0 0.995638425038 99.6966538917 Annotation Cluster 19 Enrichment Score: 0.499696846052 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0051539~4 iron,4 sulfur cluster binding 4 2.0202020202 0.188836568668 987946,985627,985554,987231 109 21 1498 2.61773700306 1.0 0.994403619518 93.0739922231 SP_PIR_KEYWORDS iron-sulfur 3 1.51515151515 0.28633742051 987946,985554,987231 198 15 2792 2.8202020202 1.0 0.985254429938 97.6348038967 GOTERM_MF_FAT GO:0051536~iron-sulfur cluster binding 4 2.0202020202 0.328301196908 987946,985627,985554,987231 109 28 1498 1.96330275229 1.0 0.994593240344 99.3759168902 GOTERM_MF_FAT GO:0051540~metal cluster binding 4 2.0202020202 0.328301196908 987946,985627,985554,987231 109 28 1498 1.96330275229 1.0 0.994593240344 99.3759168902 GOTERM_MF_FAT GO:0005506~iron ion binding 4 2.0202020202 0.38939856169 987946,984962,985554,987231 109 31 1498 1.77330571175 1.0 0.997782939862 99.8151228358 SP_PIR_KEYWORDS iron 3 1.51515151515 0.442502205806 987946,985554,987231 198 21 2792 2.01443001443 1.0 0.988830743699 99.8474315513 Annotation Cluster 20 Enrichment Score: 0.287973805203 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009309~amine biosynthetic process 8 4.0404040404 0.451621905909 985876,984805,984694,987360,985706,987983,987914,985194 93 92 1335 1.24824684432 1.0 0.997837831327 99.9654266995 GOTERM_BP_FAT GO:0008652~cellular amino acid biosynthetic process 7 3.53535353535 0.587864710636 985876,984805,984694,987360,985706,987983,987914 93 89 1335 1.12903225806 1.0 0.999422162929 99.9992178828 Annotation Cluster 21 Enrichment Score: 0.264560898337 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR INTERPRO IPR003593:ATPase,AAA+ type,core 9 4.54545454545 0.377691256626 987830,985821,987203,987020,987204,986662,985677,985514,986435 170 98 2417 1.30570228091 1.0 1.0 99.862113944 SMART SM00382:AAA 9 4.54545454545 0.782963059019 987830,985821,987203,987020,987204,986662,985677,985514,986435 44 98 441 0.920454545455 1.0 0.999999998575 99.999914901 Annotation Cluster 22 Enrichment Score: 0.261930330438 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006396~RNA processing 4 2.0202020202 0.493841710333 985730,987713,985554,985781 93 38 1335 1.51103565365 1.0 0.998483427275 99.9880551435 GOTERM_BP_FAT GO:0034470~ncRNA processing 3 1.51515151515 0.60611016987 985730,987713,985781 93 29 1335 1.48498331479 1.0 0.999389792807 99.9995710533 Annotation Cluster 23 Enrichment Score: 0.222980116175 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS DNA damage 3 1.51515151515 0.598438993484 987648,987204,985419 198 28 2792 1.51082251082 1.0 0.989558625554 99.9960014658 SP_PIR_KEYWORDS dna repair 3 1.51515151515 0.598438993484 987648,987204,985419 198 28 2792 1.51082251082 1.0 0.989558625554 99.9960014658 Annotation Cluster 24 Enrichment Score: 0.216652664978 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR INTERPRO IPR003439:ABC transporter-like 6 3.0303030303 0.587332617366 985821,987020,986662,985677,985514,986435 170 73 2417 1.16857373086 1.0 1.0 99.9995406556 INTERPRO IPR017871:ABC transporter,conserved site 5 2.52525252525 0.627784444107 985821,987020,986662,985677,985514 170 61 2417 1.16538090646 1.0 1.0 99.9998903629 Annotation Cluster 25 Enrichment Score: 0.211286705622 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0016310~phosphorylation 5 2.52525252525 0.518562512358 984930,984924,986170,984890,987016 93 54 1335 1.32915173238 1.0 0.9988219205 99.993852462 GOTERM_BP_FAT GO:0006796~phosphate metabolic process 5 2.52525252525 0.669374837392 984930,984924,986170,984890,987016 93 65 1335 1.10421836228 1.0 0.999701372392 99.9999579562 GOTERM_BP_FAT GO:0006793~phosphorus metabolic process 5 2.52525252525 0.669374837392 984930,984924,986170,984890,987016 93 65 1335 1.10421836228 1.0 0.999701372392 99.9999579562 Annotation Cluster 26 Enrichment Score: 0.185796027899 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0030528~transcription regulator activity 14 7.07070707071 0.392162801626 987223,987031,986126,985948,984890,984998,985748,984408,984510,987463,985573,987235,984456,986557 109 163 1498 1.18039061181 1.0 0.997100351339 99.8255203768 SP_PIR_KEYWORDS transcription regulation 9 4.54545454545 0.611606855161 984510,987463,985573,987223,987031,987235,984456,985748,986557 198 119 2792 1.06646294882 1.0 0.988929932562 99.9972382617 SP_PIR_KEYWORDS Transcription 9 4.54545454545 0.667772291524 984510,987463,985573,987223,987031,987235,984456,985748,986557 198 125 2792 1.01527272727 1.0 0.991696019755 99.9995121902 GOTERM_BP_FAT GO:0006350~transcription 9 4.54545454545 0.691396403548 984510,987463,985573,987223,987031,987235,984456,985748,986557 93 130 1335 0.993796526055 1.0 0.999776531132 99.9999831501 GOTERM_BP_FAT GO:0006355~regulation of transcription,DNA-dependent 12 6.06060606061 0.740248920404 984408,984510,987463,985573,987223,986126,987031,987235,984456,985948,985748,986557 93 183 1335 0.941300898995 1.0 0.999843460894 99.999998287 GOTERM_BP_FAT GO:0051252~regulation of RNA metabolic process 12 6.06060606061 0.740248920404 984408,984510,987463,985573,987223,986126,987031,987235,984456,985948,985748,986557 93 183 1335 0.941300898995 1.0 0.999843460894 99.999998287 GOTERM_BP_FAT GO:0045449~regulation of transcription 12 6.06060606061 0.824855714774 984408,984510,987463,985573,987223,986126,987031,987235,984456,985948,985748,986557 93 197 1335 0.874406418864 1.0 0.999968961481 99.9999999908 Annotation Cluster 27 Enrichment Score: 0.174775610862 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0015662~ATPase activity,coupled to transmembrane movement of ions,phosphorylative mechanism 3 1.51515151515 0.267525213184 987148,987149,985323 109 14 1498 2.94495412844 1.0 0.986951878922 98.1157360342 GOTERM_MF_FAT GO:0046873~metal ion transmembrane transporter activity 3 1.51515151515 0.502938815982 987148,987149,985323 109 23 1498 1.79258077383 1.0 0.999402742324 99.9866014139 GOTERM_MF_FAT GO:0042625~ATPase activity,coupled to transmembrane movement of ions 3 1.51515151515 0.548709642817 987148,987149,985323 109 25 1498 1.64917431193 1.0 0.999384368498 99.9960929528 GOTERM_BP_FAT GO:0030001~metal ion transport 3 1.51515151515 0.643130688229 987148,987149,985323 93 31 1335 1.38917793965 1.0 0.999571409094 99.9998841847 GOTERM_MF_FAT GO:0043492~ATPase activity,coupled to movement of substances 4 2.0202020202 0.830912445748 987148,987149,985323,985677 109 61 1498 0.901188148594 1.0 0.999997198544 99.9999999858 GOTERM_MF_FAT GO:0042626~ATPase activity,coupled to transmembrane movement of substances 4 2.0202020202 0.830912445748 987148,987149,985323,985677 109 61 1498 0.901188148594 1.0 0.999997198544 99.9999999858 GOTERM_MF_FAT GO:0042623~ATPase activity,coupled 5 2.52525252525 0.84442970055 986011,987148,987149,985323,985677 109 80 1498 0.858944954128 1.0 0.999994988246 99.9999999951 GOTERM_MF_FAT GO:0016820~hydrolase activity,acting on acid anhydrides,catalyzing transmembrane movement of substances 4 2.0202020202 0.854841256308 987148,987149,985323,985677 109 64 1498 0.858944954128 1.0 0.999995431814 99.999999998 GOTERM_MF_FAT GO:0015405~P-P-bond-hydrolysis-driven transmembrane transporter activity 4 2.0202020202 0.869123203903 987148,987149,985323,985677 109 66 1498 0.832916319155 1.0 0.99999661581 99.9999999995 GOTERM_MF_FAT GO:0015399~primary active transmembrane transporter activity 4 2.0202020202 0.869123203903 987148,987149,985323,985677 109 66 1498 0.832916319155 1.0 0.99999661581 99.9999999995 Annotation Cluster 28 Enrichment Score: 0.15816502497 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0015077~monovalent inorganic cation transmembrane transporter activity 3 1.51515151515 0.526191169675 987148,987149,984962 109 24 1498 1.71788990826 1.0 0.999485013826 99.9927284824 GOTERM_BP_FAT GO:0015672~monovalent inorganic cation transport 3 1.51515151515 0.545361598687 987148,987149,984962 93 26 1335 1.65632754342 1.0 0.998920789064 99.9971243536 GOTERM_MF_FAT GO:0022890~inorganic cation transmembrane transporter activity 3 1.51515151515 0.798058306956 987148,987149,984962 109 40 1498 1.03073394495 1.0 0.999993152797 99.999999863 GOTERM_BP_FAT GO:0006811~ion transport 5 2.52525252525 0.82598472959 987148,987149,984962,985323,987767 93 81 1335 0.886101154918 1.0 0.999963058893 99.9999999916 GOTERM_BP_FAT GO:0006812~cation transport 4 2.0202020202 0.855736634059 987148,987149,984962,985323 93 67 1335 0.8570052961 1.0 0.999980738989 99.9999999993 Annotation Cluster 29 Enrichment Score: 0.144819402574 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS oxidoreductase 7 3.53535353535 0.597108044143 984694,987147,987639,984962,987231,984725,987585 198 88 2792 1.12167125803 1.0 0.991643099258 99.9958518804 GOTERM_BP_FAT GO:0055114~oxidation reduction 7 3.53535353535 0.859623486851 984694,987147,987639,984962,987231,984725,987585 93 121 1335 0.830445214609 1.0 0.999979577003 99.9999999995 Annotation Cluster 30 Enrichment Score: 0.122789581458 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0016410~N-acyltransferase activity 3 1.51515151515 0.732484293356 986737,986455,987026 109 35 1498 1.17798165138 1.0 0.999981365005 99.9999950499 GOTERM_MF_FAT GO:0008080~N-acetyltransferase activity 3 1.51515151515 0.732484293356 986737,986455,987026 109 35 1498 1.17798165138 1.0 0.999981365005 99.9999950499 GOTERM_MF_FAT GO:0016407~acetyltransferase activity 3 1.51515151515 0.798058306956 986737,986455,987026 109 40 1498 1.03073394495 1.0 0.999993152797 99.999999863 Annotation Cluster 31 Enrichment Score: 0.113143139899 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0046164~alcohol catabolic process 3 1.51515151515 0.764484567738 987639,986282,985236 93 39 1335 1.10421836228 1.0 0.999897945017 99.9999995328 GOTERM_BP_FAT GO:0044275~cellular carbohydrate catabolic process 3 1.51515151515 0.776864001087 987639,986282,985236 93 40 1335 1.07661290323 1.0 0.999910915417 99.9999997718 Annotation Cluster 32 Enrichment Score: 0.110883854004 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006508~proteolysis 4 2.0202020202 0.734272431272 987455,985602,985099,987360 93 54 1335 1.0633213859 1.0 0.999851463145 99.9999976836 GOTERM_MF_FAT GO:0070011~peptidase activity,acting on L-amino acid peptides 4 2.0202020202 0.761966628706 987455,985602,985099,987360 109 54 1498 1.01800883452 1.0 0.999983909853 99.9999988839 GOTERM_MF_FAT GO:0008233~peptidase activity 4 2.0202020202 0.830912445748 987455,985602,985099,987360 109 61 1498 0.901188148594 1.0 0.999997198544 99.9999999858 Annotation Cluster 33 Enrichment Score: 0.109922631961 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0034660~ncRNA metabolic process 4 2.0202020202 0.734272431272 985730,987713,985752,985781 93 54 1335 1.0633213859 1.0 0.999851463145 99.9999976836 GOTERM_BP_FAT GO:0006399~tRNA metabolic process 3 1.51515151515 0.820913718677 985730,985752,985781 93 44 1335 0.978739002933 1.0 0.999971502632 99.9999999877 Annotation Cluster 34 Enrichment Score: 0.0922397166038 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY lmo02060:Phosphotransferase system (PTS) 6 3.0303030303 0.718212935341 985051,986170,987159,984518,987825,986779 64 83 892 1.00753012048 1.0 0.999883903309 99.9999049353 GOTERM_BP_FAT GO:0009401~phosphoenolpyruvate-dependent sugar phosphotransferase system 6 3.0303030303 0.843554175026 985051,986170,987159,984518,987825,986779 93 101 1335 0.852762695624 1.0 0.99997535312 99.9999999979 GOTERM_BP_FAT GO:0008643~carbohydrate transport 6 3.0303030303 0.872799820489 985051,986170,987159,984518,987825,986779 93 106 1335 0.81253804017 1.0 0.999981924028 99.9999999999 Annotation Cluster 35 Enrichment Score: 0.0772649618572 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS transmembrane 12 6.06060606061 0.758677814668 984897,985318,987830,985304,984509,987148,987149,984962,985323,987500,984890,986779 198 183 2792 0.924656400066 1.0 0.996608522049 99.9999859643 SP_PIR_KEYWORDS membrane 11 5.55555555556 0.821521001181 985901,984897,985318,987830,985304,984509,987148,987149,987500,984890,986779 198 178 2792 0.871410736579 1.0 0.997876281936 99.9999995067 SP_PIR_KEYWORDS cell membrane 9 4.54545454545 0.882395807878 984897,985318,987830,985304,984509,987148,987149,987500,986779 198 158 2792 0.803222094361 1.0 0.99937689478 99.9999999952 GOTERM_CC_FAT GO:0005886~plasma membrane 9 4.54545454545 0.892484457585 984897,985318,987830,985304,984509,987148,987149,987500,986779 33 166 498 0.818181818182 1.0 1.0 99.9999999299 Annotation Cluster 36 Enrichment Score: 0.0696081964151 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY lmo00860:Porphyrin and chlorophyll metabolism 3 1.51515151515 0.658525553561 986101,986075,986161 64 31 892 1.34879032258 1.0 0.999886562728 99.9992211633 GOTERM_BP_FAT GO:0006767~water-soluble vitamin metabolic process 3 1.51515151515 0.865044322064 987946,986101,986075 93 49 1335 0.878867676103 1.0 0.99997975515 99.9999999997 GOTERM_BP_FAT GO:0042364~water-soluble vitamin biosynthetic process 3 1.51515151515 0.865044322064 987946,986101,986075 93 49 1335 0.878867676103 1.0 0.99997975515 99.9999999997 GOTERM_BP_FAT GO:0009110~vitamin biosynthetic process 3 1.51515151515 0.899096933417 987946,986101,986075 93 54 1335 0.797491039427 1.0 0.999989952767 100.0 GOTERM_BP_FAT GO:0006766~vitamin metabolic process 3 1.51515151515 0.899096933417 987946,986101,986075 93 54 1335 0.797491039427 1.0 0.999989952767 100.0 GOTERM_BP_FAT GO:0051188~cofactor biosynthetic process 4 2.0202020202 0.959596017452 987946,986101,986075,986161 93 91 1335 0.630981921305 1.0 0.999999772339 100.0 Annotation Cluster 37 Enrichment Score: 0.0655815170598 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS protein biosynthesis 3 1.51515151515 0.76118544422 985752,987031,986619 198 38 2792 1.11323763955 1.0 0.995945604332 99.9999875008 GOTERM_BP_FAT GO:0006412~translation 4 2.0202020202 0.971284573304 987200,985752,987031,986619 93 97 1335 0.591952111739 1.0 0.999999941002 100.0 Annotation Cluster 38 Enrichment Score: 0.0610298213205 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS transmembrane 12 6.06060606061 0.758677814668 984897,985318,987830,985304,984509,987148,987149,984962,985323,987500,984890,986779 198 183 2792 0.924656400066 1.0 0.996608522049 99.9999859643 GOTERM_CC_FAT GO:0016021~integral to membrane 15 7.57575757576 0.91724958076 985318,987830,984509,985304,987148,987149,984962,985677,987500,984890,986779,984897,986475,985323,987825 33 269 498 0.841500506928 1.0 1.0 99.9999999941 GOTERM_CC_FAT GO:0031224~intrinsic to membrane 15 7.57575757576 0.942682900799 985318,987830,984509,985304,987148,987149,984962,985677,987500,984890,986779,984897,986475,985323,987825 33 277 498 0.81719724319 1.0 1.0 99.9999999998 Annotation Cluster 39 Enrichment Score: 0.0363595264108 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0019318~hexose metabolic process 3 1.51515151515 0.886550670326 984770,986282,985236 93 52 1335 0.828163771712 1.0 0.999987838978 100.0 GOTERM_BP_FAT GO:0005996~monosaccharide metabolic process 3 1.51515151515 0.954063727328 984770,986282,985236 93 67 1335 0.642753972075 1.0 0.999999672767 100.0 Annotation Cluster 40 Enrichment Score: 0.0326575356454 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0005402~cation:sugar symporter activity 4 2.0202020202 0.923579672668 986170,987159,984518,986779 109 76 1498 0.723322066634 1.0 0.99999981419 100.0 GOTERM_MF_FAT GO:0005351~sugar:hydrogen symporter activity 4 2.0202020202 0.923579672668 986170,987159,984518,986779 109 76 1498 0.723322066634 1.0 0.99999981419 100.0 GOTERM_MF_FAT GO:0015295~solute:hydrogen symporter activity 4 2.0202020202 0.923579672668 986170,987159,984518,986779 109 76 1498 0.723322066634 1.0 0.99999981419 100.0 GOTERM_MF_FAT GO:0051119~sugar transmembrane transporter activity 4 2.0202020202 0.927706083994 986170,987159,984518,986779 109 77 1498 0.713928273561 1.0 0.999999798289 100.0 GOTERM_MF_FAT GO:0015294~solute:cation symporter activity 4 2.0202020202 0.931629494856 986170,987159,984518,986779 109 78 1498 0.704775346977 1.0 0.999999782309 100.0 GOTERM_MF_FAT GO:0015293~symporter activity 4 2.0202020202 0.935358407496 986170,987159,984518,986779 109 79 1498 0.695854140053 1.0 0.999999766329 100.0 Annotation Cluster 41 Enrichment Score: 0.0153000787014 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0043232~intracellular non-membrane-bounded organelle 4 2.0202020202 0.965383610173 987200,984639,987287,985030 33 96 498 0.628787878788 1.0 1.0 100.0 GOTERM_CC_FAT GO:0043228~non-membrane-bounded organelle 4 2.0202020202 0.965383610173 987200,984639,987287,985030 33 96 498 0.628787878788 1.0 1.0 100.0 Annotation Cluster 42 Enrichment Score: 0.00854765678158 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0050662~coenzyme binding 3 1.51515151515 0.97250714404 984805,984694,987446 109 72 1498 0.572629969419 1.0 0.999999994836 100.0 GOTERM_MF_FAT GO:0048037~cofactor binding 4 2.0202020202 0.988580150494 984805,984694,984540,987446 109 108 1498 0.509004417261 1.0 0.999999999915 100.0