93 |
0.02416 |
0.6733 |
lmo2042 |
N/A |
-17.13 |
0.038629 |
149 -- 196 |
158 -- 206 |
cell division protein MraZ |
|
_____________148_____________________________________________197\n_____________|_______________________________________________|\n5'-UUU...GCGAA_________________UAAAG_____AUGU____AA__________UCUAA...CCC-3'\n______________GUGGGG___AGAUGUGG______UGGU____AUGA__GUGGGUGAAG\n______________:||:||___|||::||:______:||:____||||__:||::||||:\n______________UACUCC___UCUGUACU______GCCG____UACU__UACUUACUUU\n3'-GUU...UGCCC______GUA________UGAUGU____GU______C___________UGUUU...GGA-5'\n_____________|_______________________________________________|\n_____________207_____________________________________________157\n |
190 -- 196 |
158 -- 164 |
-27.738 kcal/mol |
5.20754 kcal/mol |
13.9391 kcal/mol |
148 197@LB@ | |@LB@5'-UUU...GCGAA UAAAG AUGU AA UCUAA...CCC-3'@LB@ GUGGGG AGAUGUGG UGGU AUGA GUGGGUGAAG@LB@ :||:|| |||::||: :||: |||| :||::||||:@LB@ UACUCC UCUGUACU GCCG UACU UACUUACUUU@LB@3'-GUU...UGCCC GUA UGAUGU GU C UGUUU...GGA-5'@LB@ | |@LB@ 207 157@LB@@LB@@LB@Energy -17.13 kcal/mol@LB@Hybridization Energy -27.738 kcal/mol@LB@Unfolding Energy - mRNA 5.20754 kcal/mol@LB@Unfolding Energy - sRNA 13.9391 kcal/mol@LB@@LB@Position - mRNA 149 -- 196@LB@Position - sRNA 158 -- 206@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 158 -- 164@LB@ |
94 |
0.02439 |
0.6733 |
lmo0952 |
N/A |
-17.21 |
0.037353 |
188 -- 223 |
166 -- 199 |
lmo0952 |
|
_____________187__________________________________224\n_____________|____________________________________|\n5'-AAC...AAACG________UU__GAU_____A___AA__________AGUAC...UAA-3'\n______________GAGGCAUA__CA___GAUUA_ACG__CUGGUGAGAU\n______________||||||||__||___:|:||_|||__|:::||||||\n______________CUCCGUAU__GU___UUGAU_UGC__GGUUACUCUA\n3'-GUU...CCCUA________CU__AC______G___C___________CUUAC...GGA-5'\n_____________|____________________________________|\n_____________200__________________________________165\n |
217 -- 223 |
166 -- 172 |
-30.0979 kcal/mol |
6.14462 kcal/mol |
13.4403 kcal/mol |
187 224@LB@ | |@LB@5'-AAC...AAACG UU GAU A AA AGUAC...UAA-3'@LB@ GAGGCAUA CA GAUUA ACG CUGGUGAGAU@LB@ |||||||| || :|:|| ||| |:::||||||@LB@ CUCCGUAU GU UUGAU UGC GGUUACUCUA@LB@3'-GUU...CCCUA CU AC G C CUUAC...GGA-5'@LB@ | |@LB@ 200 165@LB@@LB@@LB@Energy -17.21 kcal/mol@LB@Hybridization Energy -30.0979 kcal/mol@LB@Unfolding Energy - mRNA 6.14462 kcal/mol@LB@Unfolding Energy - sRNA 13.4403 kcal/mol@LB@@LB@Position - mRNA 188 -- 223@LB@Position - sRNA 166 -- 199@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 166 -- 172@LB@ |
95 |
0.02474 |
0.6733 |
lmo2446 |
N/A |
-18.44 |
0.021161 |
178 -- 278 |
95 -- 188 |
glycosidase |
|
_____________177____________________279\n_____________|______________________|\n5'-UGA...AGGAA___________GC_A_______GAAAA...ACG-3'\n______________AGUGAGAUGAA__G_AGAACGA\n______________|:|||||||||__|_|:|||:|\n______________UUACUCUACUU__C_UUUUGUU\n3'-GUU...GCCGG___________A__________UAUUA...GGA-5'\n_____________|______________________|\n_____________189____________________94\n |
210 -- 216 |
154 -- 160 |
-17.9823 kcal/mol |
4.45349 kcal/mol |
0.959215 kcal/mol |
177 279@LB@ | |@LB@5'-UGA...AGGAA GC A GAAAA...ACG-3'@LB@ AGUGAGAUGAA G AGAACGA@LB@ |:||||||||| | |:|||:|@LB@ UUACUCUACUU C UUUUGUU@LB@3'-GUU...GCCGG A UAUUA...GGA-5'@LB@ | |@LB@ 189 94@LB@@LB@@LB@Energy -18.44 kcal/mol@LB@Hybridization Energy -17.9823 kcal/mol@LB@Unfolding Energy - mRNA 4.45349 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 178 -- 278@LB@Position - sRNA 95 -- 188@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 154 -- 160@LB@ |
97 |
0.02539 |
0.6733 |
lmo2585 |
N/A |
-13.14 |
0.201793 |
84 -- 125 |
164 -- 211 |
|
|
_____________83______126\n_____________|_______|\n5'-ACA...GAUGC_______AAGGG...AAG-3'\n______________GGCGGGA\n______________::|||||\n______________UUGCCCU\n3'-GUU...ACGUA_______ACUCC...GGA-5'\n_____________|_______|\n_____________212_____163\n |
178 -- 184 |
201 -- 207 |
-10.7547 kcal/mol |
3.27081 kcal/mol |
0.326294 kcal/mol |
83 126@LB@ | |@LB@5'-ACA...GAUGC AAGGG...AAG-3'@LB@ GGCGGGA@LB@ ::|||||@LB@ UUGCCCU@LB@3'-GUU...ACGUA ACUCC...GGA-5'@LB@ | |@LB@ 212 163@LB@@LB@@LB@Energy -13.14 kcal/mol@LB@Hybridization Energy -10.7547 kcal/mol@LB@Unfolding Energy - mRNA 3.27081 kcal/mol@LB@Unfolding Energy - sRNA 0.326294 kcal/mol@LB@@LB@Position - mRNA 84 -- 125@LB@Position - sRNA 164 -- 211@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 201 -- 207@LB@ |
98 |
0.02549 |
0.6733 |
lmo2155 |
N/A |
-16.07 |
0.061955 |
240 -- 298 |
157 -- 207 |
ribonucleotide-diphosphate reductase subunit alpha |
|
_____________239________299\n_____________|__________|\n5'-UAU...UAAAA__________AACAG...AAA-3'\n______________GACGGGG_GA\n______________:|||||:_||\n______________UUGCCCU_CU\n3'-GUU...ACGUA_______A__CCGUA...GGA-5'\n_____________|__________|\n_____________208________156\n |
240 -- 246 |
201 -- 207 |
-11.5149 kcal/mol |
1.00175 kcal/mol |
0.374399 kcal/mol |
239 299@LB@ | |@LB@5'-UAU...UAAAA AACAG...AAA-3'@LB@ GACGGGG GA@LB@ :|||||: ||@LB@ UUGCCCU CU@LB@3'-GUU...ACGUA A CCGUA...GGA-5'@LB@ | |@LB@ 208 156@LB@@LB@@LB@Energy -16.07 kcal/mol@LB@Hybridization Energy -11.5149 kcal/mol@LB@Unfolding Energy - mRNA 1.00175 kcal/mol@LB@Unfolding Energy - sRNA 0.374399 kcal/mol@LB@@LB@Position - mRNA 240 -- 298@LB@Position - sRNA 157 -- 207@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 201 -- 207@LB@ |
99 |
0.02562 |
0.6733 |
lmo2201 |
N/A |
-18.35 |
0.022079 |
190 -- 255 |
101 -- 170 |
3-oxoacyl-ACP synthase |
|
_____________189_____________________________________________________________________256\n_____________|_______________________________________________________________________|\n5'-AAC...AUAAG________________________GAAGA__A___GUU__U______G__GCU___A___C__________ACGAU...AUG-3'\n______________GAGAUGAGU__AAAUGGAUAA_GA_____GU_GUU___AC_GGUGUU_GA___GUU__CA__CUAUUGGAA\n______________|||||||:|__|||:::||||_||_____||_||:___||_|:|||:_||___|||__||__|||||||||\n______________CUCUACUUA__UUUGUUUAUU_CU_____CA_CAG___UG_CUACAG_CU___CAA__GU__GAUAACCUU\n3'-GUU...GGUUA_________CU__________A__AAAAC______AUU__U______A__GAU___CG__AA_________CUACC...GGA-5'\n_____________|_______________________________________________________________________|\n_____________171_____________________________________________________________________100\n |
249 -- 255 |
101 -- 107 |
-41.8612 kcal/mol |
11.5076 kcal/mol |
19.339 kcal/mol |
189 256@LB@ | |@LB@5'-AAC...AUAAG GAAGA A GUU U G GCU A C ACGAU...AUG-3'@LB@ GAGAUGAGU AAAUGGAUAA GA GU GUU AC GGUGUU GA GUU CA CUAUUGGAA@LB@ |||||||:| |||:::|||| || || ||: || |:|||: || ||| || |||||||||@LB@ CUCUACUUA UUUGUUUAUU CU CA CAG UG CUACAG CU CAA GU GAUAACCUU@LB@3'-GUU...GGUUA CU A AAAAC AUU U A GAU CG AA CUACC...GGA-5'@LB@ | |@LB@ 171 100@LB@@LB@@LB@Energy -18.35 kcal/mol@LB@Hybridization Energy -41.8612 kcal/mol@LB@Unfolding Energy - mRNA 11.5076 kcal/mol@LB@Unfolding Energy - sRNA 19.339 kcal/mol@LB@@LB@Position - mRNA 190 -- 255@LB@Position - sRNA 101 -- 170@LB@Position Seed - mRNA 249 -- 255@LB@Position Seed - sRNA 101 -- 107@LB@ |
100 |
0.02596 |
0.6733 |
lmo2805 |
N/A |
-13.33 |
0.188364 |
273 -- 298 |
147 -- 172 |
hypothetical secreted protein |
|
_____________272_______________________________________299\n_____________|_________________________________________|\n5'-GAA...CAUAC______GG_____AG_____AAAAA________________AAUAG...AAA-3'\n______________AACAGA____UGA__AGUUG____________GAGAUGGAU\n______________||||||____|||__|||||____________:||||||||\n______________UUGUCU____ACU__UCAAC____________UUCUACCUA\n3'-GUU...CAGAU______ACAG___GA_____GGUAAGAUAACC_________UGUGG...GGA-5'\n_____________|_________________________________________|\n_____________173_______________________________________146\n |
211 -- 217 |
94 -- 100 |
-22.9496 kcal/mol |
2.56346 kcal/mol |
9.49359 kcal/mol |
272 299@LB@ | |@LB@5'-GAA...CAUAC GG AG AAAAA AAUAG...AAA-3'@LB@ AACAGA UGA AGUUG GAGAUGGAU@LB@ |||||| ||| ||||| :||||||||@LB@ UUGUCU ACU UCAAC UUCUACCUA@LB@3'-GUU...CAGAU ACAG GA GGUAAGAUAACC UGUGG...GGA-5'@LB@ | |@LB@ 173 146@LB@@LB@@LB@Energy -13.33 kcal/mol@LB@Hybridization Energy -22.9496 kcal/mol@LB@Unfolding Energy - mRNA 2.56346 kcal/mol@LB@Unfolding Energy - sRNA 9.49359 kcal/mol@LB@@LB@Position - mRNA 273 -- 298@LB@Position - sRNA 147 -- 172@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 94 -- 100@LB@ |
101 |
0.026 |
0.6733 |
lmo2768 |
N/A |
-17.52 |
0.032492 |
230 -- 251 |
161 -- 179 |
hypothetical membrane protein |
|
_____________229__________252\n_____________|____________|\n5'-UUA...GUAAU____________CUUUU...UAA-3'\n______________AUGAGAUGGAUG\n______________||||||||:|||\n______________UACUCUACUUAC\n3'-GUU...CCGGU____________UUUUG...GGA-5'\n_____________|____________|\n_____________180__________160\n |
245 -- 251 |
161 -- 167 |
-15.292 kcal/mol |
2.52317 kcal/mol |
0.818518 kcal/mol |
229 252@LB@ | |@LB@5'-UUA...GUAAU CUUUU...UAA-3'@LB@ AUGAGAUGGAUG@LB@ ||||||||:|||@LB@ UACUCUACUUAC@LB@3'-GUU...CCGGU UUUUG...GGA-5'@LB@ | |@LB@ 180 160@LB@@LB@@LB@Energy -17.52 kcal/mol@LB@Hybridization Energy -15.292 kcal/mol@LB@Unfolding Energy - mRNA 2.52317 kcal/mol@LB@Unfolding Energy - sRNA 0.818518 kcal/mol@LB@@LB@Position - mRNA 230 -- 251@LB@Position - sRNA 161 -- 179@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 161 -- 167@LB@ |
102 |
0.02619 |
0.6733 |
lmo1799 |
N/A |
-17.02 |
0.040600 |
38 -- 69 |
171 -- 207 |
peptidoglycan binding protein |
|
_____________37______________70\n_____________|_______________|\n5'-CUA...AAAAC__G____________UUGGC...UGG-3'\n______________GA_GGGA_GGGGCAU\n______________:|_||||_|:|||||\n______________UU_CCCU_CUCCGUA\n3'-GUU...ACGUA__G____A_______UCUGU...GGA-5'\n_____________|_______________|\n_____________208_____________170\n |
45 -- 51 |
193 -- 199 |
-19.1902 kcal/mol |
1.80232 kcal/mol |
8.95053 kcal/mol |
37 70@LB@ | |@LB@5'-CUA...AAAAC G UUGGC...UGG-3'@LB@ GA GGGA GGGGCAU@LB@ :| |||| |:|||||@LB@ UU CCCU CUCCGUA@LB@3'-GUU...ACGUA G A UCUGU...GGA-5'@LB@ | |@LB@ 208 170@LB@@LB@@LB@Energy -17.02 kcal/mol@LB@Hybridization Energy -19.1902 kcal/mol@LB@Unfolding Energy - mRNA 1.80232 kcal/mol@LB@Unfolding Energy - sRNA 8.95053 kcal/mol@LB@@LB@Position - mRNA 38 -- 69@LB@Position - sRNA 171 -- 207@LB@Position Seed - mRNA 45 -- 51@LB@Position Seed - sRNA 193 -- 199@LB@ |
103 |
0.02634 |
0.6733 |
lmo2183 |
N/A |
-17.72 |
0.029644 |
120 -- 189 |
95 -- 172 |
ferrichrome ABC transporter permease |
|
_____________119_______________190\n_____________|_________________|\n5'-AGA...UGUGU____UU___________UUAUU...UCC-3'\n______________AUGA__UGGAUGAAAAU\n______________||||__||:|||||||:\n______________UACU__ACUUACUUUUG\n3'-GUU...CCGGU____CU___________UUUAU...GGA-5'\n_____________|_________________|\n_____________173_______________94\n |
130 -- 136 |
156 -- 162 |
-14.4355 kcal/mol |
3.54286 kcal/mol |
0.922045 kcal/mol |
119 190@LB@ | |@LB@5'-AGA...UGUGU UU UUAUU...UCC-3'@LB@ AUGA UGGAUGAAAAU@LB@ |||| ||:|||||||:@LB@ UACU ACUUACUUUUG@LB@3'-GUU...CCGGU CU UUUAU...GGA-5'@LB@ | |@LB@ 173 94@LB@@LB@@LB@Energy -17.72 kcal/mol@LB@Hybridization Energy -14.4355 kcal/mol@LB@Unfolding Energy - mRNA 3.54286 kcal/mol@LB@Unfolding Energy - sRNA 0.922045 kcal/mol@LB@@LB@Position - mRNA 120 -- 189@LB@Position - sRNA 95 -- 172@LB@Position Seed - mRNA 130 -- 136@LB@Position Seed - sRNA 156 -- 162@LB@ |