129 |
0.03464 |
0.6968 |
lmo0756 |
N/A |
-20.18 |
0.009099 |
160 -- 214 |
175 -- 223 |
ABC transporter ATP-binding protein |
|
_____________159__________215\n_____________|____________|\n5'-AGU...AUAGA_______G____AGAAG...UUU-3'\n______________GACGGGA_GGGG\n______________:||||||_|:||\n______________UUGCCCU_CUCC\n3'-GUU...ACGUA_______A____GUAUC...GGA-5'\n_____________|____________|\n_____________224__________174\n |
181 -- 187 |
201 -- 207 |
-16.8336 kcal/mol |
1.76926 kcal/mol |
3.58567 kcal/mol |
159 215@LB@ | |@LB@5'-AGU...AUAGA G AGAAG...UUU-3'@LB@ GACGGGA GGGG@LB@ :|||||| |:||@LB@ UUGCCCU CUCC@LB@3'-GUU...ACGUA A GUAUC...GGA-5'@LB@ | |@LB@ 224 174@LB@@LB@@LB@Energy -20.18 kcal/mol@LB@Hybridization Energy -16.8336 kcal/mol@LB@Unfolding Energy - mRNA 1.76926 kcal/mol@LB@Unfolding Energy - sRNA 3.58567 kcal/mol@LB@@LB@Position - mRNA 160 -- 214@LB@Position - sRNA 175 -- 223@LB@Position Seed - mRNA 181 -- 187@LB@Position Seed - sRNA 201 -- 207@LB@ |
130 |
0.03486 |
0.6968 |
lmo1231 |
N/A |
-15.49 |
0.079293 |
19 -- 84 |
118 -- 185 |
DNA polymerase beta |
|
_____________18___________________85\n_____________|____________________|\n5'-UCU...UUGCC__________CU________CGCCA...GCA-3'\n______________CAGUG_GAUG__UGAAAACA\n______________||:||_||||__||||||||\n______________GUUAC_CUAC__ACUUUUGU\n3'-GUU...UGCCG_____U____UU________UUAUU...GGA-5'\n_____________|____________________|\n_____________186__________________117\n |
46 -- 52 |
155 -- 161 |
-18.0743 kcal/mol |
4.62758 kcal/mol |
0.95817 kcal/mol |
18 85@LB@ | |@LB@5'-UCU...UUGCC CU CGCCA...GCA-3'@LB@ CAGUG GAUG UGAAAACA@LB@ ||:|| |||| ||||||||@LB@ GUUAC CUAC ACUUUUGU@LB@3'-GUU...UGCCG U UU UUAUU...GGA-5'@LB@ | |@LB@ 186 117@LB@@LB@@LB@Energy -15.49 kcal/mol@LB@Hybridization Energy -18.0743 kcal/mol@LB@Unfolding Energy - mRNA 4.62758 kcal/mol@LB@Unfolding Energy - sRNA 0.95817 kcal/mol@LB@@LB@Position - mRNA 19 -- 84@LB@Position - sRNA 118 -- 185@LB@Position Seed - mRNA 46 -- 52@LB@Position Seed - sRNA 155 -- 161@LB@ |
131 |
0.03528 |
0.6968 |
lmo0788 |
N/A |
-16.25 |
0.057193 |
177 -- 197 |
197 -- 213 |
lmo0788 |
|
_____________176______198\n_____________|________|\n5'-AAA...CGAAA________AAAAU...AUU-3'\n______________GGGAUGAG\n______________||||||||\n______________CCCUACUC\n3'-GUU...UAUUG________CGUAU...GGA-5'\n_____________|________|\n_____________214______196\n |
191 -- 197 |
197 -- 203 |
-13.9782 kcal/mol |
1.18818 kcal/mol |
0.386531 kcal/mol |
176 198@LB@ | |@LB@5'-AAA...CGAAA AAAAU...AUU-3'@LB@ GGGAUGAG@LB@ ||||||||@LB@ CCCUACUC@LB@3'-GUU...UAUUG CGUAU...GGA-5'@LB@ | |@LB@ 214 196@LB@@LB@@LB@Energy -16.25 kcal/mol@LB@Hybridization Energy -13.9782 kcal/mol@LB@Unfolding Energy - mRNA 1.18818 kcal/mol@LB@Unfolding Energy - sRNA 0.386531 kcal/mol@LB@@LB@Position - mRNA 177 -- 197@LB@Position - sRNA 197 -- 213@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 197 -- 203@LB@ |
133 |
0.03548 |
0.6968 |
lmo2772 |
N/A |
-15.87 |
0.067267 |
191 -- 210 |
179 -- 199 |
PTS beta-glucoside transporter subunit IIABC |
|
_____________190__________________211\n_____________|____________________|\n5'-GCG...UUUAG____AU______________AAUCA...AAU-3'\n______________GAGG__UAG_CAUGGACUAC\n______________||||__|||_||||:|||||\n______________CUCC__AUC_GUACUUGAUG\n3'-GUU...CCCUA____GU___U__________UGCCG...GGA-5'\n_____________|____________________|\n_____________200__________________178\n |
203 -- 209 |
180 -- 186 |
-24.3176 kcal/mol |
4.09739 kcal/mol |
10.4768 kcal/mol |
190 211@LB@ | |@LB@5'-GCG...UUUAG AU AAUCA...AAU-3'@LB@ GAGG UAG CAUGGACUAC@LB@ |||| ||| ||||:|||||@LB@ CUCC AUC GUACUUGAUG@LB@3'-GUU...CCCUA GU U UGCCG...GGA-5'@LB@ | |@LB@ 200 178@LB@@LB@@LB@Energy -15.87 kcal/mol@LB@Hybridization Energy -24.3176 kcal/mol@LB@Unfolding Energy - mRNA 4.09739 kcal/mol@LB@Unfolding Energy - sRNA 10.4768 kcal/mol@LB@@LB@Position - mRNA 191 -- 210@LB@Position - sRNA 179 -- 199@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 180 -- 186@LB@ |
135 |
0.03605 |
0.6968 |
lmo1003 |
N/A |
-16.96 |
0.041836 |
78 -- 154 |
154 -- 221 |
phosphotransferase system enzyme I |
|
_____________77_______________________________________________________________________________________155\n_____________|________________________________________________________________________________________|\n5'-GUG...CUUAA____AUCA_____________CUCUUG___U___UAA______CU_____UACUAU______U_AA___A_C______AAA_______UUGAA...AAG-3'\n______________AUCA____UGGGCG_UUAUGU______GUA_UGG____AGGCG__GACAU______CUACAC_G__GGU_G_GAUGAA___GAAGCAA\n______________||||____:|||||_:||||:______:||_:||____||||:__|||||______||||||_|__::|_|_||||||___:||:|||\n______________UAGU____GCCCGC_GAUACG______UAU_GCC____UCCGU__CUGUA______GAUGUG_C__UUA_C_CUACUU___UUUUGUU\n3'-GUU...AACGG____ACAA______G_______________U___CUAC_____AU_____CUU_________C_GG_____U______AC________UAUUA...GGA-5'\n_____________|________________________________________________________________________________________|\n_____________222______________________________________________________________________________________153\n |
148 -- 154 |
154 -- 160 |
-50.8348 kcal/mol |
18.1196 kcal/mol |
22.592 kcal/mol |
77 155@LB@ | |@LB@5'-GUG...CUUAA AUCA CUCUUG U UAA CU UACUAU U AA A C AAA UUGAA...AAG-3'@LB@ AUCA UGGGCG UUAUGU GUA UGG AGGCG GACAU CUACAC G GGU G GAUGAA GAAGCAA@LB@ |||| :||||| :||||: :|| :|| ||||: ||||| |||||| | ::| | |||||| :||:|||@LB@ UAGU GCCCGC GAUACG UAU GCC UCCGU CUGUA GAUGUG C UUA C CUACUU UUUUGUU@LB@3'-GUU...AACGG ACAA G U CUAC AU CUU C GG U AC UAUUA...GGA-5'@LB@ | |@LB@ 222 153@LB@@LB@@LB@Energy -16.96 kcal/mol@LB@Hybridization Energy -50.8348 kcal/mol@LB@Unfolding Energy - mRNA 18.1196 kcal/mol@LB@Unfolding Energy - sRNA 22.592 kcal/mol@LB@@LB@Position - mRNA 78 -- 154@LB@Position - sRNA 154 -- 221@LB@Position Seed - mRNA 148 -- 154@LB@Position Seed - sRNA 154 -- 160@LB@ |
137 |
0.03627 |
0.6968 |
lmo2666 |
N/A |
-15.01 |
0.096662 |
42 -- 111 |
153 -- 211 |
PTS galacticol transporter subunit IIB |
|
_____________41__________________112\n_____________|___________________|\n5'-CUC...ACUCA___CGAAA___________AGUAA...UGG-3'\n______________GAG_____GAUGAAGACGA\n______________|||_____:|||||:||:|\n______________CUC_____UUACUUUUGUU\n3'-GUU...GGUUA___UAC_____________UAUUA...GGA-5'\n_____________|___________________|\n_____________212_________________152\n |
104 -- 110 |
154 -- 160 |
-11.8615 kcal/mol |
1.60013 kcal/mol |
0.933796 kcal/mol |
41 112@LB@ | |@LB@5'-CUC...ACUCA CGAAA AGUAA...UGG-3'@LB@ GAG GAUGAAGACGA@LB@ ||| :|||||:||:|@LB@ CUC UUACUUUUGUU@LB@3'-GUU...GGUUA UAC UAUUA...GGA-5'@LB@ | |@LB@ 212 152@LB@@LB@@LB@Energy -15.01 kcal/mol@LB@Hybridization Energy -11.8615 kcal/mol@LB@Unfolding Energy - mRNA 1.60013 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 42 -- 111@LB@Position - sRNA 153 -- 211@LB@Position Seed - mRNA 104 -- 110@LB@Position Seed - sRNA 154 -- 160@LB@ |
139 |
0.03644 |
0.6968 |
lmo2566 |
N/A |
-16.54 |
0.050390 |
198 -- 240 |
121 -- 170 |
lmo2566 |
|
_____________197_________________241\n_____________|___________________|\n5'-GAA...ACAUA_________AUA_______CCUUA...CAG-3'\n______________GAGAUGAAU___GAAAACA\n______________|||||||||___|||||||\n______________CUCUACUUA___CUUUUGU\n3'-GUU...GGUUA___________________UUAUU...GGA-5'\n_____________|___________________|\n_____________171_________________120\n |
210 -- 216 |
155 -- 161 |
-17.6586 kcal/mol |
1.26524 kcal/mol |
0.929544 kcal/mol |
197 241@LB@ | |@LB@5'-GAA...ACAUA AUA CCUUA...CAG-3'@LB@ GAGAUGAAU GAAAACA@LB@ ||||||||| |||||||@LB@ CUCUACUUA CUUUUGU@LB@3'-GUU...GGUUA UUAUU...GGA-5'@LB@ | |@LB@ 171 120@LB@@LB@@LB@Energy -16.54 kcal/mol@LB@Hybridization Energy -17.6586 kcal/mol@LB@Unfolding Energy - mRNA 1.26524 kcal/mol@LB@Unfolding Energy - sRNA 0.929544 kcal/mol@LB@@LB@Position - mRNA 198 -- 240@LB@Position - sRNA 121 -- 170@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 155 -- 161@LB@ |
140 |
0.0365 |
0.6968 |
lmo1717 |
N/A |
-17.46 |
0.033387 |
195 -- 217 |
147 -- 170 |
|
|
_____________194______________________218\n_____________|________________________|\n5'-UAG...AGUAG____C___________________AACAC...AAA-3'\n______________GAGA__GAUGAAAAUGGAUAGUGA\n______________||||__:|||||||:::|||:|||\n______________CUCU__UUACUUUUGUUUAUUACU\n3'-GUU...GGUUA____AC__________________AAAAC...GGA-5'\n_____________|________________________|\n_____________171______________________146\n |
203 -- 209 |
155 -- 161 |
-21.6361 kcal/mol |
2.67158 kcal/mol |
5.93585 kcal/mol |
194 218@LB@ | |@LB@5'-UAG...AGUAG C AACAC...AAA-3'@LB@ GAGA GAUGAAAAUGGAUAGUGA@LB@ |||| :|||||||:::|||:|||@LB@ CUCU UUACUUUUGUUUAUUACU@LB@3'-GUU...GGUUA AC AAAAC...GGA-5'@LB@ | |@LB@ 171 146@LB@@LB@@LB@Energy -17.46 kcal/mol@LB@Hybridization Energy -21.6361 kcal/mol@LB@Unfolding Energy - mRNA 2.67158 kcal/mol@LB@Unfolding Energy - sRNA 5.93585 kcal/mol@LB@@LB@Position - mRNA 195 -- 217@LB@Position - sRNA 147 -- 170@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 155 -- 161@LB@ |
141 |
0.03665 |
0.6968 |
lmo1798 |
N/A |
-14.74 |
0.108024 |
280 -- 295 |
194 -- 209 |
|
|
_____________279_______296\n_____________|_________|\n5'-GAU...CACUU_________AAUGG...GUU-3'\n______________AUAACGGGA\n______________|||||||||\n______________UAUUGCCCU\n3'-GUU...AUACG_________ACUCC...GGA-5'\n_____________|_________|\n_____________210_______193\n |
282 -- 288 |
201 -- 207 |
-12.5707 kcal/mol |
0.27177 kcal/mol |
0.374318 kcal/mol |
279 296@LB@ | |@LB@5'-GAU...CACUU AAUGG...GUU-3'@LB@ AUAACGGGA@LB@ |||||||||@LB@ UAUUGCCCU@LB@3'-GUU...AUACG ACUCC...GGA-5'@LB@ | |@LB@ 210 193@LB@@LB@@LB@Energy -14.74 kcal/mol@LB@Hybridization Energy -12.5707 kcal/mol@LB@Unfolding Energy - mRNA 0.27177 kcal/mol@LB@Unfolding Energy - sRNA 0.374318 kcal/mol@LB@@LB@Position - mRNA 280 -- 295@LB@Position - sRNA 194 -- 209@LB@Position Seed - mRNA 282 -- 288@LB@Position Seed - sRNA 201 -- 207@LB@ |
142 |
0.03693 |
0.6968 |
lmo2586 |
N/A |
-16.96 |
0.041696 |
196 -- 266 |
151 -- 227 |
formate dehydrogenase subunit alpha |
|
_____________195______267\n_____________|________|\n5'-UUU...GUGGC________UGGUG...AUC-3'\n______________GCGGGAUG\n______________:|||||||\n______________UGCCCUAC\n3'-GUU...CGUAU________UCCGU...GGA-5'\n_____________|________|\n_____________228______150\n |
240 -- 246 |
199 -- 205 |
-13.0644 kcal/mol |
3.68871 kcal/mol |
0.331032 kcal/mol |
195 267@LB@ | |@LB@5'-UUU...GUGGC UGGUG...AUC-3'@LB@ GCGGGAUG@LB@ :|||||||@LB@ UGCCCUAC@LB@3'-GUU...CGUAU UCCGU...GGA-5'@LB@ | |@LB@ 228 150@LB@@LB@@LB@Energy -16.96 kcal/mol@LB@Hybridization Energy -13.0644 kcal/mol@LB@Unfolding Energy - mRNA 3.68871 kcal/mol@LB@Unfolding Energy - sRNA 0.331032 kcal/mol@LB@@LB@Position - mRNA 196 -- 266@LB@Position - sRNA 151 -- 227@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 199 -- 205@LB@ |