37 |
0.007696 |
0.5562 |
lmo0551 |
N/A |
-17.72 |
0.029617 |
133 -- 210 |
151 -- 204 |
lmo0551 |
|
_____________132____________211\n_____________|______________|\n5'-AGA...UUAAG________G_____AAUUC...CUU-3'\n______________GAGGUGAG_GAAGA\n______________|||:|||:_|||:|\n______________CUCUACUU_CUUUU\n3'-GUU...GGUUA________A_____GUUUA...GGA-5'\n_____________|______________|\n_____________205____________150\n |
135 -- 141 |
163 -- 169 |
-13.8898 kcal/mol |
2.56868 kcal/mol |
0.904482 kcal/mol |
132 211@LB@ | |@LB@5'-AGA...UUAAG G AAUUC...CUU-3'@LB@ GAGGUGAG GAAGA@LB@ |||:|||: |||:|@LB@ CUCUACUU CUUUU@LB@3'-GUU...GGUUA A GUUUA...GGA-5'@LB@ | |@LB@ 205 150@LB@@LB@@LB@Energy -17.72 kcal/mol@LB@Hybridization Energy -13.8898 kcal/mol@LB@Unfolding Energy - mRNA 2.56868 kcal/mol@LB@Unfolding Energy - sRNA 0.904482 kcal/mol@LB@@LB@Position - mRNA 133 -- 210@LB@Position - sRNA 151 -- 204@LB@Position Seed - mRNA 135 -- 141@LB@Position Seed - sRNA 163 -- 169@LB@ |
38 |
0.007855 |
0.5562 |
lmo1229 |
N/A |
-18.27 |
0.022927 |
193 -- 228 |
147 -- 186 |
|
|
_____________192_______________________________________229\n_____________|_________________________________________|\n5'-AUU...AGGAG___U_________A________________UA_________CAACA...GCG-3'\n______________GAA_UUACGUGGC_AAUGAGA_____GAAA__AAGUAGUGA\n______________|||_:|||::|||_|||||||_____||||__||:||:|||\n______________CUU_GAUGUGCCG_UUACUCU_____CUUU__UUUAUUACU\n3'-GUU...CUGUA_____________G_______ACUUA____UG_________AAAAC...GGA-5'\n_____________|_________________________________________|\n_____________187_______________________________________146\n |
207 -- 213 |
167 -- 173 |
-29.0601 kcal/mol |
3.84241 kcal/mol |
14.4129 kcal/mol |
192 229@LB@ | |@LB@5'-AUU...AGGAG U A UA CAACA...GCG-3'@LB@ GAA UUACGUGGC AAUGAGA GAAA AAGUAGUGA@LB@ ||| :|||::||| ||||||| |||| ||:||:|||@LB@ CUU GAUGUGCCG UUACUCU CUUU UUUAUUACU@LB@3'-GUU...CUGUA G ACUUA UG AAAAC...GGA-5'@LB@ | |@LB@ 187 146@LB@@LB@@LB@Energy -18.27 kcal/mol@LB@Hybridization Energy -29.0601 kcal/mol@LB@Unfolding Energy - mRNA 3.84241 kcal/mol@LB@Unfolding Energy - sRNA 14.4129 kcal/mol@LB@@LB@Position - mRNA 193 -- 228@LB@Position - sRNA 147 -- 186@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 167 -- 173@LB@ |
39 |
0.008114 |
0.5599 |
lmo0390 |
N/A |
-15.77 |
0.070471 |
151 -- 193 |
167 -- 211 |
uracil-DNA glycosylase |
|
_____________150________194\n_____________|__________|\n5'-UCG...ACUGA__________AUUAA...AUG-3'\n______________GACGGGA_GA\n______________:||||||_||\n______________UUGCCCU_CU\n3'-GUU...ACGUA_______A__CCGUA...GGA-5'\n_____________|__________|\n_____________212________166\n |
185 -- 191 |
201 -- 207 |
-12.4012 kcal/mol |
0.989391 kcal/mol |
0.374399 kcal/mol |
150 194@LB@ | |@LB@5'-UCG...ACUGA AUUAA...AUG-3'@LB@ GACGGGA GA@LB@ :|||||| ||@LB@ UUGCCCU CU@LB@3'-GUU...ACGUA A CCGUA...GGA-5'@LB@ | |@LB@ 212 166@LB@@LB@@LB@Energy -15.77 kcal/mol@LB@Hybridization Energy -12.4012 kcal/mol@LB@Unfolding Energy - mRNA 0.989391 kcal/mol@LB@Unfolding Energy - sRNA 0.374399 kcal/mol@LB@@LB@Position - mRNA 151 -- 193@LB@Position - sRNA 167 -- 211@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 201 -- 207@LB@ |
40 |
0.00848 |
0.5705 |
lmo2399 |
N/A |
-21.52 |
0.004592 |
127 -- 195 |
156 -- 207 |
|
|
_____________126_________________________________________________________________196\n_____________|___________________________________________________________________|\n5'-AUU...UCGAC_________GU_______CUUGUGGUUUAAAC____AGA____G__UAGA______A___G______GCUAA...CUG-3'\n______________GGUGAGGCA__GGCG_GA______________GCUA___ACGG_UA____AUGGGG_GAA_GAGGAU\n______________|:|||||||__|:|:_||______________:|||___||||_:|____|||:|:_|||_||::|:\n______________CUACUCCGU__CUGU_CU______________UGAU___UGCC_GU____UACUCU_CUU_CUUUUG\n3'-GUU...UUGCC_________AU____A____________________G______G____________A___A______UUUAU...GGA-5'\n_____________|___________________________________________________________________|\n_____________208_________________________________________________________________155\n |
132 -- 138 |
194 -- 200 |
-37.8581 kcal/mol |
11.6457 kcal/mol |
14.014 kcal/mol |
126 196@LB@ | |@LB@5'-AUU...UCGAC GU CUUGUGGUUUAAAC AGA G UAGA A G GCUAA...CUG-3'@LB@ GGUGAGGCA GGCG GA GCUA ACGG UA AUGGGG GAA GAGGAU@LB@ |:||||||| |:|: || :||| |||| :| |||:|: ||| ||::|:@LB@ CUACUCCGU CUGU CU UGAU UGCC GU UACUCU CUU CUUUUG@LB@3'-GUU...UUGCC AU A G G A A UUUAU...GGA-5'@LB@ | |@LB@ 208 155@LB@@LB@@LB@Energy -21.52 kcal/mol@LB@Hybridization Energy -37.8581 kcal/mol@LB@Unfolding Energy - mRNA 11.6457 kcal/mol@LB@Unfolding Energy - sRNA 14.014 kcal/mol@LB@@LB@Position - mRNA 127 -- 195@LB@Position - sRNA 156 -- 207@LB@Position Seed - mRNA 132 -- 138@LB@Position Seed - sRNA 194 -- 200@LB@ |
43 |
0.009411 |
0.5889 |
lmo0325 |
N/A |
-15.65 |
0.074138 |
261 -- 289 |
174 -- 199 |
transcriptional regulator |
|
______________261_________________________290\n______________|___________________________|\n___________5'-_______AAUACUUAAAAAA________ACGAU...UCG-3'\n______________UGCUAUU_____________GGAAGAUG\n______________|||:|||_____________||||||||\n______________ACGGUAA_____________CCUUCUAC\n3'-GUU...GAUCA_______GAUAA________________CUAUG...GGA-5'\n_____________|____________________________|\n_____________200__________________________173\n |
22 -- 28 |
97 -- 103 |
-16.3216 kcal/mol |
2.64423 kcal/mol |
5.20765 kcal/mol |
261 290@LB@ | |@LB@ 5'- AAUACUUAAAAAA ACGAU...UCG-3'@LB@ UGCUAUU GGAAGAUG@LB@ |||:||| ||||||||@LB@ ACGGUAA CCUUCUAC@LB@3'-GUU...GAUCA GAUAA CUAUG...GGA-5'@LB@ | |@LB@ 200 173@LB@@LB@@LB@Energy -15.65 kcal/mol@LB@Hybridization Energy -16.3216 kcal/mol@LB@Unfolding Energy - mRNA 2.64423 kcal/mol@LB@Unfolding Energy - sRNA 5.20765 kcal/mol@LB@@LB@Position - mRNA 261 -- 289@LB@Position - sRNA 174 -- 199@LB@Position Seed - mRNA 22 -- 28@LB@Position Seed - sRNA 97 -- 103@LB@ |
44 |
0.01013 |
0.599 |
lmo0022 |
N/A |
-16.20 |
0.058356 |
176 -- 261 |
150 -- 213 |
PTS fructose transporter subunit IIB |
|
_____________175________________262\n_____________|__________________|\n5'-CCG...GUGAU_______A___A______UGAUG...UCA-3'\n______________GAUGGGG_GGA_GAGGAC\n______________:|||:|:_|:|_||::||\n______________UUACUCU_CUU_CUUUUG\n3'-GUU...GCCGG_______A___A______UUUAU...GGA-5'\n_____________|__________________|\n_____________214________________149\n |
181 -- 187 |
167 -- 173 |
-14.383 kcal/mol |
2.57794 kcal/mol |
0.941471 kcal/mol |
175 262@LB@ | |@LB@5'-CCG...GUGAU A A UGAUG...UCA-3'@LB@ GAUGGGG GGA GAGGAC@LB@ :|||:|: |:| ||::||@LB@ UUACUCU CUU CUUUUG@LB@3'-GUU...GCCGG A A UUUAU...GGA-5'@LB@ | |@LB@ 214 149@LB@@LB@@LB@Energy -16.20 kcal/mol@LB@Hybridization Energy -14.383 kcal/mol@LB@Unfolding Energy - mRNA 2.57794 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 176 -- 261@LB@Position - sRNA 150 -- 213@LB@Position Seed - mRNA 181 -- 187@LB@Position Seed - sRNA 167 -- 173@LB@ |
45 |
0.0103 |
0.599 |
lmo0066 |
N/A |
-17.00 |
0.040990 |
179 -- 207 |
157 -- 199 |
toxin |
|
_____________178___________208\n_____________|_____________|\n5'-AAA...AGGCC_____________AAGUC...AUU-3'\n______________AGAUGAAUGAAAG\n______________||||||||||||:\n______________UCUACUUACUUUU\n3'-GUU...GUUAC_____________GUUUA...GGA-5'\n_____________|_____________|\n_____________200___________156\n |
201 -- 207 |
157 -- 163 |
-14.7839 kcal/mol |
1.76886 kcal/mol |
0.884237 kcal/mol |
178 208@LB@ | |@LB@5'-AAA...AGGCC AAGUC...AUU-3'@LB@ AGAUGAAUGAAAG@LB@ ||||||||||||:@LB@ UCUACUUACUUUU@LB@3'-GUU...GUUAC GUUUA...GGA-5'@LB@ | |@LB@ 200 156@LB@@LB@@LB@Energy -17.00 kcal/mol@LB@Hybridization Energy -14.7839 kcal/mol@LB@Unfolding Energy - mRNA 1.76886 kcal/mol@LB@Unfolding Energy - sRNA 0.884237 kcal/mol@LB@@LB@Position - mRNA 179 -- 207@LB@Position - sRNA 157 -- 199@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |
46 |
0.01036 |
0.599 |
lmo2695 |
N/A |
-19.87 |
0.010617 |
150 -- 211 |
156 -- 209 |
dihydroxyacetone kinase subunit DhaK |
|
_____________149_________________________________________________________________212\n_____________|___________________________________________________________________|\n5'-UUA...UUCUA____A____AAU_____________________UAUAAAGGA____UUU__UC______________UCUUA...CUC-3'\n______________GUAA_GGGA___UGAGGUA_AGA___GGACUAU_________GGUU___UG__AGAUGAA_GAAGAU\n______________:|||_||||___|||||:|_|||___|:||||:_________||::___||__|||||||_|||:|:\n______________UAUU_CCCU___ACUCCGU_UCU___CUUGAUG_________CCGG___AC__UCUACUU_CUUUUG\n3'-GUU...AUACG____G______________A___GUA_______UG___________UU____________A______UUUAU...GGA-5'\n_____________|___________________________________________________________________|\n_____________210_________________________________________________________________155\n |
199 -- 205 |
163 -- 169 |
-36.4151 kcal/mol |
9.16424 kcal/mol |
18.7057 kcal/mol |
149 212@LB@ | |@LB@5'-UUA...UUCUA A AAU UAUAAAGGA UUU UC UCUUA...CUC-3'@LB@ GUAA GGGA UGAGGUA AGA GGACUAU GGUU UG AGAUGAA GAAGAU@LB@ :||| |||| |||||:| ||| |:||||: ||:: || ||||||| |||:|:@LB@ UAUU CCCU ACUCCGU UCU CUUGAUG CCGG AC UCUACUU CUUUUG@LB@3'-GUU...AUACG G A GUA UG UU A UUUAU...GGA-5'@LB@ | |@LB@ 210 155@LB@@LB@@LB@Energy -19.87 kcal/mol@LB@Hybridization Energy -36.4151 kcal/mol@LB@Unfolding Energy - mRNA 9.16424 kcal/mol@LB@Unfolding Energy - sRNA 18.7057 kcal/mol@LB@@LB@Position - mRNA 150 -- 211@LB@Position - sRNA 156 -- 209@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 163 -- 169@LB@ |
47 |
0.01063 |
0.599 |
lmo0138 |
N/A |
-20.04 |
0.009767 |
146 -- 210 |
158 -- 213 |
lmo0138 |
|
_____________145_________________________________________________________________________211\n_____________|___________________________________________________________________________|\n5'-AAA...AAUGC____G_____U_____UAA_____A____UUCAUUAUU________________A___GCA___A__________UAAAA...GCA-3'\n______________GUGC__AUGC_AUAAU___GGGAU_AGGU_________AUAGACA_GAG__AUG_GGC____GA_AUGAGUGAAA\n______________|:||__||||_||||:___|||||_|||:_________|||||||_||:__|::_|||____||_||||:|||||\n______________CGCG__UACG_UAUUG___CCCUA_UCCG_________UAUCUGU_CUU__UGU_CCG____CU_UACUUACUUU\n3'-GUU...AAGCC____GA__________________C____________________A___GA___G___GUUA__C__________UGUUU...GGA-5'\n_____________|___________________________________________________________________________|\n_____________214_________________________________________________________________________157\n |
204 -- 210 |
158 -- 164 |
-47.7003 kcal/mol |
15.2802 kcal/mol |
21.9717 kcal/mol |
145 211@LB@ | |@LB@5'-AAA...AAUGC G U UAA A UUCAUUAUU A GCA A UAAAA...GCA-3'@LB@ GUGC AUGC AUAAU GGGAU AGGU AUAGACA GAG AUG GGC GA AUGAGUGAAA@LB@ |:|| |||| ||||: ||||| |||: ||||||| ||: |:: ||| || ||||:|||||@LB@ CGCG UACG UAUUG CCCUA UCCG UAUCUGU CUU UGU CCG CU UACUUACUUU@LB@3'-GUU...AAGCC GA C A GA G GUUA C UGUUU...GGA-5'@LB@ | |@LB@ 214 157@LB@@LB@@LB@Energy -20.04 kcal/mol@LB@Hybridization Energy -47.7003 kcal/mol@LB@Unfolding Energy - mRNA 15.2802 kcal/mol@LB@Unfolding Energy - sRNA 21.9717 kcal/mol@LB@@LB@Position - mRNA 146 -- 210@LB@Position - sRNA 158 -- 213@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 158 -- 164@LB@ |
48 |
0.01096 |
0.599 |
lmo0184 |
N/A |
-18.00 |
0.026009 |
159 -- 211 |
157 -- 203 |
oligo-1 6-glucosidase |
|
_____________158_____212\n_____________|_______|\n5'-ACG...ACAAG_______AUUUA...GAA-3'\n______________GGCGGGA\n______________::|||||\n______________UUGCCCU\n3'-GUU...ACGUA_______ACUCC...GGA-5'\n_____________|_______|\n_____________204_____156\n |
185 -- 191 |
201 -- 207 |
-10.9952 kcal/mol |
1.94403 kcal/mol |
0.326294 kcal/mol |
158 212@LB@ | |@LB@5'-ACG...ACAAG AUUUA...GAA-3'@LB@ GGCGGGA@LB@ ::|||||@LB@ UUGCCCU@LB@3'-GUU...ACGUA ACUCC...GGA-5'@LB@ | |@LB@ 204 156@LB@@LB@@LB@Energy -18.00 kcal/mol@LB@Hybridization Energy -10.9952 kcal/mol@LB@Unfolding Energy - mRNA 1.94403 kcal/mol@LB@Unfolding Energy - sRNA 0.326294 kcal/mol@LB@@LB@Position - mRNA 159 -- 211@LB@Position - sRNA 157 -- 203@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 201 -- 207@LB@ |