25 |
0.004689 |
0.5029 |
lmo1584 |
N/A |
-20.33 |
0.008463 |
183 -- 211 |
169 -- 209 |
|
|
_____________182___________212\n_____________|_____________|\n5'-GAA...GGCGC_____________AAAUG...CUG-3'\n______________ACAUGGCUAAUGA\n______________|||:|||:|||||\n______________UGUGCCGGUUACU\n3'-GUU...CUUGA_____________CUACU...GGA-5'\n_____________|_____________|\n_____________210___________168\n |
205 -- 211 |
169 -- 175 |
-19.4521 kcal/mol |
2.17631 kcal/mol |
6.15322 kcal/mol |
182 212@LB@ | |@LB@5'-GAA...GGCGC AAAUG...CUG-3'@LB@ ACAUGGCUAAUGA@LB@ |||:|||:|||||@LB@ UGUGCCGGUUACU@LB@3'-GUU...CUUGA CUACU...GGA-5'@LB@ | |@LB@ 210 168@LB@@LB@@LB@Energy -20.33 kcal/mol@LB@Hybridization Energy -19.4521 kcal/mol@LB@Unfolding Energy - mRNA 2.17631 kcal/mol@LB@Unfolding Energy - sRNA 6.15322 kcal/mol@LB@@LB@Position - mRNA 183 -- 211@LB@Position - sRNA 169 -- 209@LB@Position Seed - mRNA 205 -- 211@LB@Position Seed - sRNA 169 -- 175@LB@ |
27 |
0.005046 |
0.5029 |
lmo2370 |
N/A |
-21.11 |
0.005698 |
252 -- 287 |
166 -- 205 |
aminotransferase |
|
_____________251_____________288\n_____________|_______________|\n5'-CCU...AUAAU_____C_________AGAAG...UGU-3'\n______________UGAGG_GAAUGAAAG\n______________||||:_||||||||:\n______________ACUCU_CUUACUUUU\n3'-GUU...CGGUU_____A_________GUUUA...GGA-5'\n_____________|_______________|\n_____________206_____________165\n |
176 -- 182 |
157 -- 163 |
-15.2487 kcal/mol |
2.36926 kcal/mol |
0.905109 kcal/mol |
251 288@LB@ | |@LB@5'-CCU...AUAAU C AGAAG...UGU-3'@LB@ UGAGG GAAUGAAAG@LB@ ||||: ||||||||:@LB@ ACUCU CUUACUUUU@LB@3'-GUU...CGGUU A GUUUA...GGA-5'@LB@ | |@LB@ 206 165@LB@@LB@@LB@Energy -21.11 kcal/mol@LB@Hybridization Energy -15.2487 kcal/mol@LB@Unfolding Energy - mRNA 2.36926 kcal/mol@LB@Unfolding Energy - sRNA 0.905109 kcal/mol@LB@@LB@Position - mRNA 252 -- 287@LB@Position - sRNA 166 -- 205@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 157 -- 163@LB@ |
28 |
0.005366 |
0.5157 |
lmo2793 |
N/A |
-19.39 |
0.013418 |
199 -- 253 |
121 -- 174 |
lmo2793 |
|
_____________198__________________254\n_____________|____________________|\n5'-AAA...UGUAG_________UUU________AUUGG...GUU-3'\n______________CAGUGAGGU___UGAAGAUA\n______________||:||||:|___||||:|:|\n______________GUUACUCUA___ACUUUUGU\n3'-GUU...UGCCG_________CUU________UUAUU...GGA-5'\n_____________|____________________|\n_____________175__________________120\n |
212 -- 218 |
155 -- 161 |
-16.7389 kcal/mol |
5.68665 kcal/mol |
0.95817 kcal/mol |
198 254@LB@ | |@LB@5'-AAA...UGUAG UUU AUUGG...GUU-3'@LB@ CAGUGAGGU UGAAGAUA@LB@ ||:||||:| ||||:|:|@LB@ GUUACUCUA ACUUUUGU@LB@3'-GUU...UGCCG CUU UUAUU...GGA-5'@LB@ | |@LB@ 175 120@LB@@LB@@LB@Energy -19.39 kcal/mol@LB@Hybridization Energy -16.7389 kcal/mol@LB@Unfolding Energy - mRNA 5.68665 kcal/mol@LB@Unfolding Energy - sRNA 0.95817 kcal/mol@LB@@LB@Position - mRNA 199 -- 253@LB@Position - sRNA 121 -- 174@LB@Position Seed - mRNA 212 -- 218@LB@Position Seed - sRNA 155 -- 161@LB@ |
30 |
0.00607 |
0.5445 |
lmo0619 |
N/A |
-20.15 |
0.009257 |
186 -- 283 |
154 -- 223 |
lmo0619 |
|
_____________185_____________________________________________________________________________________________________284\n_____________|_______________________________________________________________________________________________________|\n5'-UAU...AACAG_____G__GC____CUU___________AAAAAG_____AGUAAAUUACUUCA_______AAAAAAGCGACCAAUU_________GUAUUA____________GGCGG...CAA-3'\n______________UCGGG_GU____GC___AU_GGAUGGGG______AGACA______________UGAAUUA________________UAC_GCCAA_______GAUGAAAACGA\n______________|||||_|:____||___|:_|||||:||______|||||______________||||:||________________:||_|||||_______:||||||||:|\n______________AGCCC_CG____CG___UG_CCUACUCC______UCUGU______________ACUUGAU________________GUG_CGGUU_______UUACUUUUGUU\n3'-GUU...GUACA_____G__GAUA__UAU__C________GUA________________________________________________C_____ACUCUAC___________UAUUA...GGA-5'\n_____________|_______________________________________________________________________________________________________|\n_____________224_____________________________________________________________________________________________________153\n |
277 -- 283 |
154 -- 160 |
-48.8019 kcal/mol |
13.571 kcal/mol |
22.2956 kcal/mol |
185 284@LB@ | |@LB@5'-UAU...AACAG G GC CUU AAAAAG AGUAAAUUACUUCA AAAAAAGCGACCAAUU GUAUUA GGCGG...CAA-3'@LB@ UCGGG GU GC AU GGAUGGGG AGACA UGAAUUA UAC GCCAA GAUGAAAACGA@LB@ ||||| |: || |: |||||:|| ||||| ||||:|| :|| ||||| :||||||||:|@LB@ AGCCC CG CG UG CCUACUCC UCUGU ACUUGAU GUG CGGUU UUACUUUUGUU@LB@3'-GUU...GUACA G GAUA UAU C GUA C ACUCUAC UAUUA...GGA-5'@LB@ | |@LB@ 224 153@LB@@LB@@LB@Energy -20.15 kcal/mol@LB@Hybridization Energy -48.8019 kcal/mol@LB@Unfolding Energy - mRNA 13.571 kcal/mol@LB@Unfolding Energy - sRNA 22.2956 kcal/mol@LB@@LB@Position - mRNA 186 -- 283@LB@Position - sRNA 154 -- 223@LB@Position Seed - mRNA 277 -- 283@LB@Position Seed - sRNA 154 -- 160@LB@ |
31 |
0.00657 |
0.5515 |
lmo1828 |
N/A |
-18.66 |
0.019040 |
211 -- 279 |
154 -- 211 |
|
|
_____________210__________280\n_____________|____________|\n5'-AGU...GAAAA____________UUGGG...AAU-3'\n______________GCAUGACGGGAU\n______________||||:|||||||\n______________CGUAUUGCCCUA\n3'-GUU...GGAUA____________CUCCG...GGA-5'\n_____________|____________|\n_____________212__________153\n |
216 -- 222 |
200 -- 206 |
-19.8213 kcal/mol |
2.93239 kcal/mol |
6.43166 kcal/mol |
210 280@LB@ | |@LB@5'-AGU...GAAAA UUGGG...AAU-3'@LB@ GCAUGACGGGAU@LB@ ||||:|||||||@LB@ CGUAUUGCCCUA@LB@3'-GUU...GGAUA CUCCG...GGA-5'@LB@ | |@LB@ 212 153@LB@@LB@@LB@Energy -18.66 kcal/mol@LB@Hybridization Energy -19.8213 kcal/mol@LB@Unfolding Energy - mRNA 2.93239 kcal/mol@LB@Unfolding Energy - sRNA 6.43166 kcal/mol@LB@@LB@Position - mRNA 211 -- 279@LB@Position - sRNA 154 -- 211@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 200 -- 206@LB@ |
32 |
0.006611 |
0.5515 |
lmo1649 |
N/A |
-18.63 |
0.019340 |
118 -- 153 |
171 -- 207 |
lmo1649 |
|
_____________117_____________________________________________________________154\n_____________|_______________________________________________________________|\n5'-GUA...UGUUA_______AGUAAU__UA______CG__________A_____UC__A_____G___________UACAA...AAA-3'\n______________CAUCGUG______GU__CU_UGC__GAUGGG_UGA_GCAUA__CG_G_ACU_ACGCGGCCAGU\n______________||||:||______|:__||_|||__:|:|||_|||_|||||__|:_|_|||_||:||||||:|\n______________GUAGUAC______CG__GA_ACG__UUGCCC_ACU_CGUAU__GU_C_UGA_UGUGCCGGUUA\n3'-GUU...CAACG_______AAGCC___CG__U___UA______U___C_____CU__A_U_______________CUCUA...GGA-5'\n_____________|_______________________________________________________________|\n_____________208_____________________________________________________________170\n |
147 -- 153 |
171 -- 177 |
-50.2657 kcal/mol |
18.2787 kcal/mol |
22.0434 kcal/mol |
117 154@LB@ | |@LB@5'-GUA...UGUUA AGUAAU UA CG A UC A G UACAA...AAA-3'@LB@ CAUCGUG GU CU UGC GAUGGG UGA GCAUA CG G ACU ACGCGGCCAGU@LB@ ||||:|| |: || ||| :|:||| ||| ||||| |: | ||| ||:||||||:|@LB@ GUAGUAC CG GA ACG UUGCCC ACU CGUAU GU C UGA UGUGCCGGUUA@LB@3'-GUU...CAACG AAGCC CG U UA U C CU A U CUCUA...GGA-5'@LB@ | |@LB@ 208 170@LB@@LB@@LB@Energy -18.63 kcal/mol@LB@Hybridization Energy -50.2657 kcal/mol@LB@Unfolding Energy - mRNA 18.2787 kcal/mol@LB@Unfolding Energy - sRNA 22.0434 kcal/mol@LB@@LB@Position - mRNA 118 -- 153@LB@Position - sRNA 171 -- 207@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 171 -- 177@LB@ |
33 |
0.006763 |
0.5515 |
lmo1941 |
N/A |
-21.42 |
0.004845 |
223 -- 286 |
154 -- 207 |
|
|
_____________222___________________________________________________________________287\n_____________|_____________________________________________________________________|\n5'-UAG...AGAAA_______AUACGAAGAACC___UGAUUAU________UU___AA_________________UC______UGAAC...UGU-3'\n______________AACGGGA____________GGC_______GACAUGAG__CUG___GGCCA___AGAUGAAU___AACAA\n______________|||||||____________|||_______|||||||:__||:___|||||___||||||||___|||||\n______________UUGCCCU____________CCG_______CUGUACUU__GAU___CCGGU___UCUACUUA___UUGUU\n3'-GUU...ACGUA_______ACU____________UAU_________________GUG_____UAC________CUU_____UAUUA...GGA-5'\n_____________|_____________________________________________________________________|\n_____________208___________________________________________________________________153\n |
273 -- 279 |
162 -- 168 |
-39.5283 kcal/mol |
10.6608 kcal/mol |
18.6655 kcal/mol |
222 287@LB@ | |@LB@5'-UAG...AGAAA AUACGAAGAACC UGAUUAU UU AA UC UGAAC...UGU-3'@LB@ AACGGGA GGC GACAUGAG CUG GGCCA AGAUGAAU AACAA@LB@ ||||||| ||| |||||||: ||: ||||| |||||||| |||||@LB@ UUGCCCU CCG CUGUACUU GAU CCGGU UCUACUUA UUGUU@LB@3'-GUU...ACGUA ACU UAU GUG UAC CUU UAUUA...GGA-5'@LB@ | |@LB@ 208 153@LB@@LB@@LB@Energy -21.42 kcal/mol@LB@Hybridization Energy -39.5283 kcal/mol@LB@Unfolding Energy - mRNA 10.6608 kcal/mol@LB@Unfolding Energy - sRNA 18.6655 kcal/mol@LB@@LB@Position - mRNA 223 -- 286@LB@Position - sRNA 154 -- 207@LB@Position Seed - mRNA 273 -- 279@LB@Position Seed - sRNA 162 -- 168@LB@ |
34 |
0.007076 |
0.552 |
lmo2678 |
N/A |
-19.30 |
0.013995 |
184 -- 246 |
155 -- 207 |
XRE family transcriptional regulator |
|
_____________183__________________________________________________________247\n_____________|____________________________________________________________|\n5'-GAA...AGACG____AG_____AA______A__AA______U___CUAAUUGUGGA__________U____UCAGU...AAG-3'\n______________GAGG__AUGGA__AUGAAC_GC__GCGGCU_GUG___________AGAUGAA_GA_GGCA\n______________||||__||:||__||||||_:|__:||||:_:||___________|||||||_||_::||\n______________CUCC__UAUCU__UACUUG_UG__UGCCGG_UAC___________UCUACUU_CU_UUGU\n3'-GUU...CCCUA____G______G_______A__________U_____________________A__U____UUAUU...GGA-5'\n_____________|____________________________________________________________|\n_____________208__________________________________________________________154\n |
233 -- 239 |
163 -- 169 |
-37.3867 kcal/mol |
12.1272 kcal/mol |
13.9822 kcal/mol |
183 247@LB@ | |@LB@5'-GAA...AGACG AG AA A AA U CUAAUUGUGGA U UCAGU...AAG-3'@LB@ GAGG AUGGA AUGAAC GC GCGGCU GUG AGAUGAA GA GGCA@LB@ |||| ||:|| |||||| :| :||||: :|| ||||||| || ::||@LB@ CUCC UAUCU UACUUG UG UGCCGG UAC UCUACUU CU UUGU@LB@3'-GUU...CCCUA G G A U A U UUAUU...GGA-5'@LB@ | |@LB@ 208 154@LB@@LB@@LB@Energy -19.30 kcal/mol@LB@Hybridization Energy -37.3867 kcal/mol@LB@Unfolding Energy - mRNA 12.1272 kcal/mol@LB@Unfolding Energy - sRNA 13.9822 kcal/mol@LB@@LB@Position - mRNA 184 -- 246@LB@Position - sRNA 155 -- 207@LB@Position Seed - mRNA 233 -- 239@LB@Position Seed - sRNA 163 -- 169@LB@ |
35 |
0.00718 |
0.552 |
lmo0397 |
N/A |
-24.49 |
0.000911 |
178 -- 232 |
160 -- 211 |
|
|
_____________177_________________________________________________________________________233\n_____________|___________________________________________________________________________|\n5'-AAU...ACAAA_______AAAAUGAAAGCAAAU_____________G__UU_G______GAG___AU__AA___C___________UAUGA...CGA-3'\n______________CUGUGCG_______________UGGCGGGA___GG_AU__A_AUGAAC___GCA__CG__CGA_GAGAUGA_UGA\n______________||:|||:_______________|::|||||___||_||__|_||||||___:||__||__|:|_|||||||_|||\n______________GAUACGU_______________AUUGCCCU___CC_UA__U_UACUUG___UGU__GC__GUU_CUCUACU_ACU\n3'-GUU...CCGCG______________________________ACU__G__UC_G______A_________CG___A_______U___UUUGU...GGA-5'\n_____________|___________________________________________________________________________|\n_____________212_________________________________________________________________________159\n |
223 -- 229 |
164 -- 170 |
-45.3132 kcal/mol |
12.0365 kcal/mol |
19.7814 kcal/mol |
177 233@LB@ | |@LB@5'-AAU...ACAAA AAAAUGAAAGCAAAU G UU G GAG AU AA C UAUGA...CGA-3'@LB@ CUGUGCG UGGCGGGA GG AU A AUGAAC GCA CG CGA GAGAUGA UGA@LB@ ||:|||: |::||||| || || | |||||| :|| || |:| ||||||| |||@LB@ GAUACGU AUUGCCCU CC UA U UACUUG UGU GC GUU CUCUACU ACU@LB@3'-GUU...CCGCG ACU G UC G A CG A U UUUGU...GGA-5'@LB@ | |@LB@ 212 159@LB@@LB@@LB@Energy -24.49 kcal/mol@LB@Hybridization Energy -45.3132 kcal/mol@LB@Unfolding Energy - mRNA 12.0365 kcal/mol@LB@Unfolding Energy - sRNA 19.7814 kcal/mol@LB@@LB@Position - mRNA 178 -- 232@LB@Position - sRNA 160 -- 211@LB@Position Seed - mRNA 223 -- 229@LB@Position Seed - sRNA 164 -- 170@LB@ |
36 |
0.007609 |
0.5562 |
lmo0649 |
N/A |
-18.52 |
0.020396 |
192 -- 219 |
177 -- 204 |
transcriptional regulator |
|
_____________191______220\n_____________|________|\n5'-UUU...AACGA________CAUGG...GUA-3'\n______________GGGAUGAG\n______________||||||||\n______________CCCUACUC\n3'-GUU...UAUUG________CGUAU...GGA-5'\n_____________|________|\n_____________205______176\n |
193 -- 199 |
197 -- 203 |
-13.9784 kcal/mol |
1.5957 kcal/mol |
0.386531 kcal/mol |
191 220@LB@ | |@LB@5'-UUU...AACGA CAUGG...GUA-3'@LB@ GGGAUGAG@LB@ ||||||||@LB@ CCCUACUC@LB@3'-GUU...UAUUG CGUAU...GGA-5'@LB@ | |@LB@ 205 176@LB@@LB@@LB@Energy -18.52 kcal/mol@LB@Hybridization Energy -13.9784 kcal/mol@LB@Unfolding Energy - mRNA 1.5957 kcal/mol@LB@Unfolding Energy - sRNA 0.386531 kcal/mol@LB@@LB@Position - mRNA 192 -- 219@LB@Position - sRNA 177 -- 204@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 197 -- 203@LB@ |