| 148 |
0.03863 |
0.6968 |
lmo1766 |
purN |
-15.06 |
0.094934 |
1 -- 35 |
156 -- 188 |
phosphoribosylglycinamide formyltransferase |
|
______________1__________________________________36\n______________|__________________________________|\n___________5'-_____GAA___________UAAAC_A_________GUAUG...AUA-3'\n______________GUGAA___AUACGGCCAAU_____G_AAUGGAAAU\n______________:||||___|:|||||||||_____|_||||:|||:\n______________UACUU___UGUGCCGGUUA_____C_UUACUUUUG\n3'-GUU...AUCUG_____GA____________CUCUA___________UUUAU...GGA-5'\n_____________|___________________________________|\n_____________189_________________________________155\n |
29 -- 35 |
156 -- 162 |
-25.7257 kcal/mol |
7.32217 kcal/mol |
9.72027 kcal/mol |
1 36@LB@ | |@LB@ 5'- GAA UAAAC A GUAUG...AUA-3'@LB@ GUGAA AUACGGCCAAU G AAUGGAAAU@LB@ :|||| |:||||||||| | ||||:|||:@LB@ UACUU UGUGCCGGUUA C UUACUUUUG@LB@3'-GUU...AUCUG GA CUCUA UUUAU...GGA-5'@LB@ | |@LB@ 189 155@LB@@LB@@LB@Energy -15.06 kcal/mol@LB@Hybridization Energy -25.7257 kcal/mol@LB@Unfolding Energy - mRNA 7.32217 kcal/mol@LB@Unfolding Energy - sRNA 9.72027 kcal/mol@LB@@LB@Position - mRNA 1 -- 35@LB@Position - sRNA 156 -- 188@LB@Position Seed - mRNA 29 -- 35@LB@Position Seed - sRNA 156 -- 162@LB@ |
| 195 |
0.0561 |
0.7607 |
lmo2779 |
N/A |
-14.82 |
0.104550 |
1 -- 44 |
150 -- 181 |
GTP-binding protein EngD |
|
_____________0____________45\n_____________|____________|\n5'-ACG...AGCUU_________U__CUAUU...CGU-3'\n______________AUGAGAUGA_UG\n______________|||||||||_||\n______________UACUCUACU_AC\n3'-GUU...CCGGU_________U__UUUUG...GGA-5'\n_____________|____________|\n_____________182__________149\n |
17 -- 23 |
164 -- 170 |
-12.8914 kcal/mol |
1.66686 kcal/mol |
0.818518 kcal/mol |
0 45@LB@ | |@LB@5'-ACG...AGCUU U CUAUU...CGU-3'@LB@ AUGAGAUGA UG@LB@ ||||||||| ||@LB@ UACUCUACU AC@LB@3'-GUU...CCGGU U UUUUG...GGA-5'@LB@ | |@LB@ 182 149@LB@@LB@@LB@Energy -14.82 kcal/mol@LB@Hybridization Energy -12.8914 kcal/mol@LB@Unfolding Energy - mRNA 1.66686 kcal/mol@LB@Unfolding Energy - sRNA 0.818518 kcal/mol@LB@@LB@Position - mRNA 1 -- 44@LB@Position - sRNA 150 -- 181@LB@Position Seed - mRNA 17 -- 23@LB@Position Seed - sRNA 164 -- 170@LB@ |
| 24 |
0.004153 |
0.4656 |
lmo1386 |
N/A |
-22.14 |
0.003328 |
2 -- 37 |
155 -- 186 |
DNA translocase |
|
_____________1____________________________________38\n_____________|____________________________________|\n__________5'-G___G________G__AAGCU______CAC_______CCGCA...UUA-3'\n______________GAA_UACGCGGC_GA_____GAUGAA___GAAAACA\n______________|||_|||:||||_:|_____||||||___|||||||\n______________CUU_AUGUGCCG_UU_____CUACUU___CUUUUGU\n3'-GUU...CUGUA___G________G__ACU________A_________UUAUU...GGA-5'\n_____________|____________________________________|\n_____________187__________________________________154\n |
31 -- 37 |
155 -- 161 |
-32.0969 kcal/mol |
6.67763 kcal/mol |
9.66922 kcal/mol |
1 38@LB@ | |@LB@ 5'-G G G AAGCU CAC CCGCA...UUA-3'@LB@ GAA UACGCGGC GA GAUGAA GAAAACA@LB@ ||| |||:|||| :| |||||| |||||||@LB@ CUU AUGUGCCG UU CUACUU CUUUUGU@LB@3'-GUU...CUGUA G G ACU A UUAUU...GGA-5'@LB@ | |@LB@ 187 154@LB@@LB@@LB@Energy -22.14 kcal/mol@LB@Hybridization Energy -32.0969 kcal/mol@LB@Unfolding Energy - mRNA 6.67763 kcal/mol@LB@Unfolding Energy - sRNA 9.66922 kcal/mol@LB@@LB@Position - mRNA 2 -- 37@LB@Position - sRNA 155 -- 186@LB@Position Seed - mRNA 31 -- 37@LB@Position Seed - sRNA 155 -- 161@LB@ |
| 125 |
0.03321 |
0.6968 |
lmo2357 |
N/A |
-16.59 |
0.049158 |
2 -- 27 |
152 -- 176 |
|
|
_____________1_____________________28\n_____________|_____________________|\n_______5'-AGCU___AU________C_______AUCUU...CAC-3'\n______________GAU__GAUGGAUG_AAAACAA\n______________:||__||||:|||_|||||||\n______________UUA__CUACUUAC_UUUUGUU\n3'-GUU...GCCGG___CU________________UAUUA...GGA-5'\n_____________|_____________________|\n_____________177___________________151\n |
19 -- 25 |
154 -- 160 |
-15.1634 kcal/mol |
3.68151 kcal/mol |
0.959215 kcal/mol |
1 28@LB@ | |@LB@ 5'-AGCU AU C AUCUU...CAC-3'@LB@ GAU GAUGGAUG AAAACAA@LB@ :|| ||||:||| |||||||@LB@ UUA CUACUUAC UUUUGUU@LB@3'-GUU...GCCGG CU UAUUA...GGA-5'@LB@ | |@LB@ 177 151@LB@@LB@@LB@Energy -16.59 kcal/mol@LB@Hybridization Energy -15.1634 kcal/mol@LB@Unfolding Energy - mRNA 3.68151 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 2 -- 27@LB@Position - sRNA 152 -- 176@LB@Position Seed - mRNA 19 -- 25@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 161 |
0.04429 |
0.7375 |
lmo0588 |
N/A |
-15.80 |
0.069486 |
3 -- 42 |
156 -- 202 |
DNA photolyase |
|
_____________2____________43\n_____________|____________|\n5'-UUG...CUUAU____________UAUGA...AAG-3'\n______________GUGGAUGAAAGC\n______________:||:||||||:|\n______________UACUUACUUUUG\n3'-GUU...UACUC____________UUUAU...GGA-5'\n_____________|____________|\n_____________203__________155\n |
36 -- 42 |
156 -- 162 |
-13.6691 kcal/mol |
1.75048 kcal/mol |
0.849227 kcal/mol |
2 43@LB@ | |@LB@5'-UUG...CUUAU UAUGA...AAG-3'@LB@ GUGGAUGAAAGC@LB@ :||:||||||:|@LB@ UACUUACUUUUG@LB@3'-GUU...UACUC UUUAU...GGA-5'@LB@ | |@LB@ 203 155@LB@@LB@@LB@Energy -15.80 kcal/mol@LB@Hybridization Energy -13.6691 kcal/mol@LB@Unfolding Energy - mRNA 1.75048 kcal/mol@LB@Unfolding Energy - sRNA 0.849227 kcal/mol@LB@@LB@Position - mRNA 3 -- 42@LB@Position - sRNA 156 -- 202@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 156 -- 162@LB@ |
| 184 |
0.05355 |
0.7607 |
lmo2119 |
N/A |
-15.99 |
0.064071 |
3 -- 81 |
95 -- 171 |
|
|
_____________2_________________________82\n_____________|_________________________|\n_________5'-CU______U______GU__________AUUAC...CCA-3'\n______________UGGGAU_AGUGAA__GACAGAUAGU\n______________||:|||_|:||||__:|||:|||:|\n______________ACUCUA_UUACUU__UUGUUUAUUA\n3'-GUU...CGGUU______C__________________CUAAA...GGA-5'\n_____________|_________________________|\n_____________172_______________________94\n |
18 -- 24 |
152 -- 158 |
-18.6088 kcal/mol |
3.83703 kcal/mol |
5.55637 kcal/mol |
2 82@LB@ | |@LB@ 5'-CU U GU AUUAC...CCA-3'@LB@ UGGGAU AGUGAA GACAGAUAGU@LB@ ||:||| |:|||| :|||:|||:|@LB@ ACUCUA UUACUU UUGUUUAUUA@LB@3'-GUU...CGGUU C CUAAA...GGA-5'@LB@ | |@LB@ 172 94@LB@@LB@@LB@Energy -15.99 kcal/mol@LB@Hybridization Energy -18.6088 kcal/mol@LB@Unfolding Energy - mRNA 3.83703 kcal/mol@LB@Unfolding Energy - sRNA 5.55637 kcal/mol@LB@@LB@Position - mRNA 3 -- 81@LB@Position - sRNA 95 -- 171@LB@Position Seed - mRNA 18 -- 24@LB@Position Seed - sRNA 152 -- 158@LB@ |
| 136 |
0.03623 |
0.6968 |
lmo1567 |
citZ |
-17.33 |
0.035419 |
8 -- 31 |
169 -- 198 |
citrate synthase |
|
_____________7______________________________32\n_____________|______________________________|\n____5'-CGAAAAA__________________________U___UCCAC...ACG-3'\n______________AGGUGUAG______GCUAUAUGGCCG_UGA\n______________|||::|||______:|||:|:||||:_|||\n______________UCCGUAUC______UGAUGUGCCGGU_ACU\n3'-GUU...CCUAC________UGUACU____________U___CUACU...GGA-5'\n_____________|______________________________|\n_____________199____________________________168\n |
21 -- 27 |
173 -- 179 |
-29.4881 kcal/mol |
5.57901 kcal/mol |
13.3393 kcal/mol |
7 32@LB@ | |@LB@ 5'-CGAAAAA U UCCAC...ACG-3'@LB@ AGGUGUAG GCUAUAUGGCCG UGA@LB@ |||::||| :|||:|:||||: |||@LB@ UCCGUAUC UGAUGUGCCGGU ACU@LB@3'-GUU...CCUAC UGUACU U CUACU...GGA-5'@LB@ | |@LB@ 199 168@LB@@LB@@LB@Energy -17.33 kcal/mol@LB@Hybridization Energy -29.4881 kcal/mol@LB@Unfolding Energy - mRNA 5.57901 kcal/mol@LB@Unfolding Energy - sRNA 13.3393 kcal/mol@LB@@LB@Position - mRNA 8 -- 31@LB@Position - sRNA 169 -- 198@LB@Position Seed - mRNA 21 -- 27@LB@Position Seed - sRNA 173 -- 179@LB@ |
| 132 |
0.03532 |
0.6968 |
lmo1773 |
purB |
-14.78 |
0.106383 |
9 -- 45 |
147 -- 186 |
adenylosuccinate lyase |
|
_____________8___________________________46\n_____________|___________________________|\n5'-AUA...AUGUU____CU_____________________AUUAU...CUU-3'\n______________GAUG__GUGAAU__AAACAAAUGGUGA\n______________:|||__:|||||__||||||||::|||\n______________UUAC__UACUUA__UUUGUUUAUUACU\n3'-GUU...GCCGG____UC______CU_____________AAAAC...GGA-5'\n_____________|___________________________|\n_____________187_________________________146\n |
33 -- 39 |
153 -- 159 |
-18.9825 kcal/mol |
5.01078 kcal/mol |
5.96192 kcal/mol |
8 46@LB@ | |@LB@5'-AUA...AUGUU CU AUUAU...CUU-3'@LB@ GAUG GUGAAU AAACAAAUGGUGA@LB@ :||| :||||| ||||||||::|||@LB@ UUAC UACUUA UUUGUUUAUUACU@LB@3'-GUU...GCCGG UC CU AAAAC...GGA-5'@LB@ | |@LB@ 187 146@LB@@LB@@LB@Energy -14.78 kcal/mol@LB@Hybridization Energy -18.9825 kcal/mol@LB@Unfolding Energy - mRNA 5.01078 kcal/mol@LB@Unfolding Energy - sRNA 5.96192 kcal/mol@LB@@LB@Position - mRNA 9 -- 45@LB@Position - sRNA 147 -- 186@LB@Position Seed - mRNA 33 -- 39@LB@Position Seed - sRNA 153 -- 159@LB@ |
| 130 |
0.03486 |
0.6968 |
lmo1231 |
N/A |
-15.49 |
0.079293 |
19 -- 84 |
118 -- 185 |
DNA polymerase beta |
|
_____________18___________________85\n_____________|____________________|\n5'-UCU...UUGCC__________CU________CGCCA...GCA-3'\n______________CAGUG_GAUG__UGAAAACA\n______________||:||_||||__||||||||\n______________GUUAC_CUAC__ACUUUUGU\n3'-GUU...UGCCG_____U____UU________UUAUU...GGA-5'\n_____________|____________________|\n_____________186__________________117\n |
46 -- 52 |
155 -- 161 |
-18.0743 kcal/mol |
4.62758 kcal/mol |
0.95817 kcal/mol |
18 85@LB@ | |@LB@5'-UCU...UUGCC CU CGCCA...GCA-3'@LB@ CAGUG GAUG UGAAAACA@LB@ ||:|| |||| ||||||||@LB@ GUUAC CUAC ACUUUUGU@LB@3'-GUU...UGCCG U UU UUAUU...GGA-5'@LB@ | |@LB@ 186 117@LB@@LB@@LB@Energy -15.49 kcal/mol@LB@Hybridization Energy -18.0743 kcal/mol@LB@Unfolding Energy - mRNA 4.62758 kcal/mol@LB@Unfolding Energy - sRNA 0.95817 kcal/mol@LB@@LB@Position - mRNA 19 -- 84@LB@Position - sRNA 118 -- 185@LB@Position Seed - mRNA 46 -- 52@LB@Position Seed - sRNA 155 -- 161@LB@ |
| 53 |
0.0118 |
0.599 |
lmo2394 |
N/A |
-15.56 |
0.076801 |
20 -- 80 |
100 -- 170 |
|
|
_____________19_____________________________________81\n_____________|______________________________________|\n5'-GGA...UUUUC________GUG___GG____________A_________AUAGU...AAA-3'\n______________GAUAGAUG___GAU________AUUUUG_UGGAGGAUG\n______________:|:|||||___||:________|||:|:_||||:||||\n______________UUGUCUAC___CUG________UAAGAU_ACCUUCUAC\n3'-GUU...CAGAU________AGA___AUCAACGG______A_________CUAUG...GGA-5'\n_____________|______________________________________|\n_____________171____________________________________99\n |
189 -- 195 |
97 -- 103 |
-26.5698 kcal/mol |
4.81204 kcal/mol |
9.44565 kcal/mol |
19 81@LB@ | |@LB@5'-GGA...UUUUC GUG GG A AUAGU...AAA-3'@LB@ GAUAGAUG GAU AUUUUG UGGAGGAUG@LB@ :|:||||| ||: |||:|: ||||:||||@LB@ UUGUCUAC CUG UAAGAU ACCUUCUAC@LB@3'-GUU...CAGAU AGA AUCAACGG A CUAUG...GGA-5'@LB@ | |@LB@ 171 99@LB@@LB@@LB@Energy -15.56 kcal/mol@LB@Hybridization Energy -26.5698 kcal/mol@LB@Unfolding Energy - mRNA 4.81204 kcal/mol@LB@Unfolding Energy - sRNA 9.44565 kcal/mol@LB@@LB@Position - mRNA 20 -- 80@LB@Position - sRNA 100 -- 170@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 97 -- 103@LB@ |
