| 53 |
0.0006788 |
0.04512 |
b3949 |
frwC |
-10.17 |
0.100438 |
200 -- 218 |
68 -- 90 |
putative enzyme IIC component of PTS |
|
_____________199_____________________219\n_____________|_______________________|\n5'-UUG...CAGCU_______G_______________AUCCU...UGG-3'\n______________UAUGAAU_AGUUG____GUGCAG\n______________||:||||_|:|||____:|||||\n______________AUGCUUA_UUAAC____UACGUC\n3'-UUU...GCAGC_______G_____ACGA______AUUAA...ACG-5'\n_____________|_______________________|\n_____________91______________________67\n |
200 -- 206 |
84 -- 90 |
-18.2816 kcal/mol |
3.60123 kcal/mol |
4.51505 kcal/mol |
199 219@LB@ | |@LB@5'-UUG...CAGCU G AUCCU...UGG-3'@LB@ UAUGAAU AGUUG GUGCAG@LB@ ||:|||| |:||| :|||||@LB@ AUGCUUA UUAAC UACGUC@LB@3'-UUU...GCAGC G ACGA AUUAA...ACG-5'@LB@ | |@LB@ 91 67@LB@@LB@@LB@Energy -10.17 kcal/mol@LB@Hybridization Energy -18.2816 kcal/mol@LB@Unfolding Energy - mRNA 3.60123 kcal/mol@LB@Unfolding Energy - sRNA 4.51505 kcal/mol@LB@@LB@Position - mRNA 200 -- 218@LB@Position - sRNA 68 -- 90@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 84 -- 90@LB@ |
| 64 |
0.001067 |
0.05874 |
b3340 |
fusA |
-13.60 |
0.012173 |
191 -- 223 |
21 -- 57 |
protein chain elongation factor EF-G GTP-binding |
|
_____________190_____________________________________224\n_____________|_______________________________________|\n5'-AAC...UAAAC____________________CUC__A____A________ACGCU...ACA-3'\n______________GAGGAA_____ACAA_AUGG___GU_CAAC_CCCAUCGC\n______________:|||||_____||||_||||___|:_||||_||||||||\n______________UUCCUU_____UGUU_UACC___CG_GUUG_GGGUAGCG\n3'-UUU...GUUUU______CAUUC____A____U____C____C________AACUG...ACG-5'\n_____________|_______________________________________|\n_____________58______________________________________20\n |
217 -- 223 |
21 -- 27 |
-33.2696 kcal/mol |
6.00361 kcal/mol |
13.6712 kcal/mol |
190 224@LB@ | |@LB@5'-AAC...UAAAC CUC A A ACGCU...ACA-3'@LB@ GAGGAA ACAA AUGG GU CAAC CCCAUCGC@LB@ :||||| |||| |||| |: |||| ||||||||@LB@ UUCCUU UGUU UACC CG GUUG GGGUAGCG@LB@3'-UUU...GUUUU CAUUC A U C C AACUG...ACG-5'@LB@ | |@LB@ 58 20@LB@@LB@@LB@Energy -13.60 kcal/mol@LB@Hybridization Energy -33.2696 kcal/mol@LB@Unfolding Energy - mRNA 6.00361 kcal/mol@LB@Unfolding Energy - sRNA 13.6712 kcal/mol@LB@@LB@Position - mRNA 191 -- 223@LB@Position - sRNA 21 -- 57@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 21 -- 27@LB@ |
| 82 |
0.001946 |
0.08273 |
b2661 |
gabD |
-10.13 |
0.102437 |
19 -- 25 |
1 -- 7 |
succinate-semialdehyde dehydrogenase I NADP-dependent |
|
_____________18______26\n_____________|_______|\n5'-CAC...AUCCA_______AAUGC...CGG-3'\n______________CACCUGC\n______________|||||||\n______________GUGGACG\n3'-UUU...CGUAA_______-5'\n_____________|______|\n_____________8______1\n |
19 -- 25 |
1 -- 7 |
-13.7555 kcal/mol |
1.28845 kcal/mol |
2.34039 kcal/mol |
18 26@LB@ | |@LB@5'-CAC...AUCCA AAUGC...CGG-3'@LB@ CACCUGC@LB@ |||||||@LB@ GUGGACG@LB@3'-UUU...CGUAA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -10.13 kcal/mol@LB@Hybridization Energy -13.7555 kcal/mol@LB@Unfolding Energy - mRNA 1.28845 kcal/mol@LB@Unfolding Energy - sRNA 2.34039 kcal/mol@LB@@LB@Position - mRNA 19 -- 25@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 19 -- 25@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 94 |
0.002802 |
0.105 |
b2905 |
gcvT |
-11.27 |
0.053451 |
219 -- 244 |
68 -- 93 |
aminomethyltransferase tetrahydrofolate-dependent subunit (T protein) of glycine cleavage complex |
|
_____________218_________________________245\n_____________|___________________________|\n5'-CUG...CUCCU_____________CACAC___U_____CGCUC...AAA-3'\n______________UUGUACGAA_CAA_____GCU_UGCGG\n______________|:|||||||_|||_____|||_|||:|\n______________AGCAUGCUU_GUU_____CGA_ACGUC\n3'-UUU...GCCGC_________A___AACA____U_____AUUAA...ACG-5'\n_____________|___________________________|\n_____________94__________________________67\n |
221 -- 227 |
85 -- 91 |
-21.376 kcal/mol |
5.42013 kcal/mol |
4.68758 kcal/mol |
218 245@LB@ | |@LB@5'-CUG...CUCCU CACAC U CGCUC...AAA-3'@LB@ UUGUACGAA CAA GCU UGCGG@LB@ |:||||||| ||| ||| |||:|@LB@ AGCAUGCUU GUU CGA ACGUC@LB@3'-UUU...GCCGC A AACA U AUUAA...ACG-5'@LB@ | |@LB@ 94 67@LB@@LB@@LB@Energy -11.27 kcal/mol@LB@Hybridization Energy -21.376 kcal/mol@LB@Unfolding Energy - mRNA 5.42013 kcal/mol@LB@Unfolding Energy - sRNA 4.68758 kcal/mol@LB@@LB@Position - mRNA 219 -- 244@LB@Position - sRNA 68 -- 93@LB@Position Seed - mRNA 221 -- 227@LB@Position Seed - sRNA 85 -- 91@LB@ |
| 117 |
0.00395 |
0.1189 |
b3447 |
ggt |
-7.92 |
0.307079 |
7 -- 34 |
69 -- 94 |
gamma-glutamyltranspeptidase |
|
_____________6____________________________35\n_____________|____________________________|\n_____5'-GUUAGG_____UCA____AUUAA__G________AAGCC...CGU-3'\n______________GUUGU___GAGU_____UG_GCUGUGCA\n______________||:||___||:|_____||_|||:||||\n______________CAGCA___CUUA_____AC_CGAUACGU\n3'-UUU...AGCCG_____UG_____GUUA___A________CAUUA...ACG-5'\n_____________|____________________________|\n_____________95___________________________68\n |
28 -- 34 |
69 -- 75 |
-19.4914 kcal/mol |
6.89072 kcal/mol |
4.68367 kcal/mol |
6 35@LB@ | |@LB@ 5'-GUUAGG UCA AUUAA G AAGCC...CGU-3'@LB@ GUUGU GAGU UG GCUGUGCA@LB@ ||:|| ||:| || |||:||||@LB@ CAGCA CUUA AC CGAUACGU@LB@3'-UUU...AGCCG UG GUUA A CAUUA...ACG-5'@LB@ | |@LB@ 95 68@LB@@LB@@LB@Energy -7.92 kcal/mol@LB@Hybridization Energy -19.4914 kcal/mol@LB@Unfolding Energy - mRNA 6.89072 kcal/mol@LB@Unfolding Energy - sRNA 4.68367 kcal/mol@LB@@LB@Position - mRNA 7 -- 34@LB@Position - sRNA 69 -- 94@LB@Position Seed - mRNA 28 -- 34@LB@Position Seed - sRNA 69 -- 75@LB@ |
| 158 |
0.006224 |
0.1377 |
b3553 |
ghrB |
-7.62 |
0.349627 |
252 -- 258 |
1 -- 7 |
glyoxylate/hydroxypyruvate reductase B |
|
_____________251_____259\n_____________|_______|\n5'-UCA...UGCAA_______AAGAG...CAC-3'\n______________CGCCUGC\n______________|:|||||\n______________GUGGACG\n3'-UUU...CGUAA_______-5'\n_____________|______|\n_____________8______1\n |
252 -- 258 |
1 -- 7 |
-12.8134 kcal/mol |
2.86334 kcal/mol |
2.34039 kcal/mol |
251 259@LB@ | |@LB@5'-UCA...UGCAA AAGAG...CAC-3'@LB@ CGCCUGC@LB@ |:|||||@LB@ GUGGACG@LB@3'-UUU...CGUAA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -7.62 kcal/mol@LB@Hybridization Energy -12.8134 kcal/mol@LB@Unfolding Energy - mRNA 2.86334 kcal/mol@LB@Unfolding Energy - sRNA 2.34039 kcal/mol@LB@@LB@Position - mRNA 252 -- 258@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 252 -- 258@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 44 |
0.0004181 |
0.03347 |
b3429 |
glgA |
-12.00 |
0.034422 |
173 -- 196 |
35 -- 55 |
glycogen synthase |
|
_____________172______________________197\n_____________|________________________|\n5'-GUA...GCUAC_____U_______UAAACA_____GAUAA...ACG-3'\n______________GGAAG_UAGGGCA______GGAGC\n______________|||||_||:|:||______|||||\n______________CCUUC_AUUCUGU______CCUCG\n3'-UUU...UUUUU_____________UAUA_______CGUUG...ACG-5'\n_____________|________________________|\n_____________56_______________________34\n |
179 -- 185 |
44 -- 50 |
-21.7083 kcal/mol |
5.57994 kcal/mol |
4.0932 kcal/mol |
172 197@LB@ | |@LB@5'-GUA...GCUAC U UAAACA GAUAA...ACG-3'@LB@ GGAAG UAGGGCA GGAGC@LB@ ||||| ||:|:|| |||||@LB@ CCUUC AUUCUGU CCUCG@LB@3'-UUU...UUUUU UAUA CGUUG...ACG-5'@LB@ | |@LB@ 56 34@LB@@LB@@LB@Energy -12.00 kcal/mol@LB@Hybridization Energy -21.7083 kcal/mol@LB@Unfolding Energy - mRNA 5.57994 kcal/mol@LB@Unfolding Energy - sRNA 4.0932 kcal/mol@LB@@LB@Position - mRNA 173 -- 196@LB@Position - sRNA 35 -- 55@LB@Position Seed - mRNA 179 -- 185@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 172 |
0.007014 |
0.1437 |
b3430 |
glgC |
-13.14 |
0.016567 |
21 -- 80 |
1 -- 39 |
glucose-1-phosphate adenylyltransferase |
|
_____________20______________________________________________________________81\n_____________|_______________________________________________________________|\n5'-CAG...CUCUC___U___UUUUUGAUCGCAAUU______A_________G__AACAGAGAU_____________UGGGG...UGA-3'\n______________GGA_CGC_______________AACGCC___CGCUUGA_GU_________UGU_UUUACCUGC\n______________|||_|||_______________||||||___|||||||_||_________||:_||:||||||\n______________CCU_GCG_______________UUGCGG___GCGAACU_CA_________ACG_AAGUGGACG\n3'-UUU...UUAUA___C________________________GUA_______G______________U_________-5'\n_____________|______________________________________________________________|\n_____________40_____________________________________________________________1\n |
74 -- 80 |
1 -- 7 |
-41.5646 kcal/mol |
13.1395 kcal/mol |
15.291 kcal/mol |
20 81@LB@ | |@LB@5'-CAG...CUCUC U UUUUUGAUCGCAAUU A G AACAGAGAU UGGGG...UGA-3'@LB@ GGA CGC AACGCC CGCUUGA GU UGU UUUACCUGC@LB@ ||| ||| |||||| ||||||| || ||: ||:||||||@LB@ CCU GCG UUGCGG GCGAACU CA ACG AAGUGGACG@LB@3'-UUU...UUAUA C GUA G U -5'@LB@ | |@LB@ 40 1@LB@@LB@@LB@Energy -13.14 kcal/mol@LB@Hybridization Energy -41.5646 kcal/mol@LB@Unfolding Energy - mRNA 13.1395 kcal/mol@LB@Unfolding Energy - sRNA 15.291 kcal/mol@LB@@LB@Position - mRNA 21 -- 80@LB@Position - sRNA 1 -- 39@LB@Position Seed - mRNA 74 -- 80@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 36 |
0.0002859 |
0.02798 |
b3927 |
glpF |
-13.42 |
0.013702 |
41 -- 78 |
5 -- 41 |
glycerol facilitator |
|
_____________40_____________________________________79\n_____________|______________________________________|\n5'-GAU...AAUAA____C___A___________UUA_____AG___CA___AUUUU...AAG-3'\n______________AUGG_GCG_UAACGCUCAUU___UGACG__GCA__CAC\n______________||||_|||_:|||||:|||:___|||||__|||__|||\n______________UACC_CGC_GUUGCGGGUAG___ACUGC__CGU__GUG\n3'-UUU...UGUUA____U_______________CGA_____AA___AA___GACG-5'\n_____________|______________________________________|\n_____________42_____________________________________4\n |
52 -- 58 |
25 -- 31 |
-39.917 kcal/mol |
11.2361 kcal/mol |
15.2629 kcal/mol |
40 79@LB@ | |@LB@5'-GAU...AAUAA C A UUA AG CA AUUUU...AAG-3'@LB@ AUGG GCG UAACGCUCAUU UGACG GCA CAC@LB@ |||| ||| :|||||:|||: ||||| ||| |||@LB@ UACC CGC GUUGCGGGUAG ACUGC CGU GUG@LB@3'-UUU...UGUUA U CGA AA AA GACG-5'@LB@ | |@LB@ 42 4@LB@@LB@@LB@Energy -13.42 kcal/mol@LB@Hybridization Energy -39.917 kcal/mol@LB@Unfolding Energy - mRNA 11.2361 kcal/mol@LB@Unfolding Energy - sRNA 15.2629 kcal/mol@LB@@LB@Position - mRNA 41 -- 78@LB@Position - sRNA 5 -- 41@LB@Position Seed - mRNA 52 -- 58@LB@Position Seed - sRNA 25 -- 31@LB@ |
| 24 |
0.0001125 |
0.01591 |
b3212 |
gltB |
-12.14 |
0.031409 |
27 -- 43 |
59 -- 75 |
glutamate synthase large subunit |
|
_____________26________________44\n_____________|_________________|\n5'-CUG...CAUAU_____________G___UCCCC...UAC-3'\n______________UUAUGCAGUAAUU_AGA\n______________:||||||||||||_|:|\n______________GAUACGUCAUUAA_UUU\n3'-UUU...AACAC_____________G___UUUCC...ACG-5'\n_____________|_________________|\n_____________76________________58\n |
33 -- 39 |
63 -- 69 |
-17.8824 kcal/mol |
2.24537 kcal/mol |
3.49177 kcal/mol |
26 44@LB@ | |@LB@5'-CUG...CAUAU G UCCCC...UAC-3'@LB@ UUAUGCAGUAAUU AGA@LB@ :|||||||||||| |:|@LB@ GAUACGUCAUUAA UUU@LB@3'-UUU...AACAC G UUUCC...ACG-5'@LB@ | |@LB@ 76 58@LB@@LB@@LB@Energy -12.14 kcal/mol@LB@Hybridization Energy -17.8824 kcal/mol@LB@Unfolding Energy - mRNA 2.24537 kcal/mol@LB@Unfolding Energy - sRNA 3.49177 kcal/mol@LB@@LB@Position - mRNA 27 -- 43@LB@Position - sRNA 59 -- 75@LB@Position Seed - mRNA 33 -- 39@LB@Position Seed - sRNA 63 -- 69@LB@ |
