44 |
0.008636 |
0.6129 |
b3317 |
rplB |
-9.78 |
0.045660 |
184 -- 194 |
43 -- 55 |
50S ribosomal subunit protein L2 |
|
_____________183___________195\n_____________|_____________|\n5'-GCA...AGUAA_____________AAUAC...UGC-3'\n______________GUC__GGAGGAGU\n______________|||__:|||||:|\n______________CAG__UCUCCUUA\n3'-UUU...CCGGG___UU________AAGUA...ACA-5'\n_____________|_____________|\n_____________56____________42\n |
188 -- 194 |
43 -- 49 |
-13.3143 kcal/mol |
2.58995 kcal/mol |
0.946481 kcal/mol |
183 195@LB@ | |@LB@5'-GCA...AGUAA AAUAC...UGC-3'@LB@ GUC GGAGGAGU@LB@ ||| :|||||:|@LB@ CAG UCUCCUUA@LB@3'-UUU...CCGGG UU AAGUA...ACA-5'@LB@ | |@LB@ 56 42@LB@@LB@@LB@Energy -9.78 kcal/mol@LB@Hybridization Energy -13.3143 kcal/mol@LB@Unfolding Energy - mRNA 2.58995 kcal/mol@LB@Unfolding Energy - sRNA 0.946481 kcal/mol@LB@@LB@Position - mRNA 184 -- 194@LB@Position - sRNA 43 -- 55@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 43 -- 49@LB@ |
45 |
0.009176 |
0.6129 |
b3389 |
aroB |
-8.88 |
0.069424 |
203 -- 218 |
37 -- 52 |
3-dehydroquinate synthase |
|
_____________202______________219\n_____________|________________|\n5'-ACA...GUUAU________UUG_____ACUCU...CGG-3'\n______________GGAGAGGA___UCGUU\n______________::||||||___||:||\n______________UUUCUCCU___AGUAA\n3'-UUU...GGCAG________UAA_____AAAAA...ACA-5'\n_____________|________________|\n_____________53_______________36\n |
204 -- 210 |
45 -- 51 |
-14.6346 kcal/mol |
4.67835 kcal/mol |
1.07641 kcal/mol |
202 219@LB@ | |@LB@5'-ACA...GUUAU UUG ACUCU...CGG-3'@LB@ GGAGAGGA UCGUU@LB@ ::|||||| ||:||@LB@ UUUCUCCU AGUAA@LB@3'-UUU...GGCAG UAA AAAAA...ACA-5'@LB@ | |@LB@ 53 36@LB@@LB@@LB@Energy -8.88 kcal/mol@LB@Hybridization Energy -14.6346 kcal/mol@LB@Unfolding Energy - mRNA 4.67835 kcal/mol@LB@Unfolding Energy - sRNA 1.07641 kcal/mol@LB@@LB@Position - mRNA 203 -- 218@LB@Position - sRNA 37 -- 52@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 45 -- 51@LB@ |
46 |
0.009202 |
0.6129 |
b0183 |
rnhB |
-8.44 |
0.085048 |
25 -- 32 |
48 -- 55 |
ribonuclease HII degrades RNA of DNA-RNA hybrids |
|
_____________24_______33\n_____________|________|\n5'-AAU...AGUUA________AUUAU...UCC-3'\n______________GUCAAAGA\n______________||||||||\n______________CAGUUUCU\n3'-UUU...CCGGG________CCUUA...ACA-5'\n_____________|________|\n_____________56_______47\n |
26 -- 32 |
48 -- 54 |
-9.30452 kcal/mol |
0.544993 kcal/mol |
0.318869 kcal/mol |
24 33@LB@ | |@LB@5'-AAU...AGUUA AUUAU...UCC-3'@LB@ GUCAAAGA@LB@ ||||||||@LB@ CAGUUUCU@LB@3'-UUU...CCGGG CCUUA...ACA-5'@LB@ | |@LB@ 56 47@LB@@LB@@LB@Energy -8.44 kcal/mol@LB@Hybridization Energy -9.30452 kcal/mol@LB@Unfolding Energy - mRNA 0.544993 kcal/mol@LB@Unfolding Energy - sRNA 0.318869 kcal/mol@LB@@LB@Position - mRNA 25 -- 32@LB@Position - sRNA 48 -- 55@LB@Position Seed - mRNA 26 -- 32@LB@Position Seed - sRNA 48 -- 54@LB@ |
47 |
0.009275 |
0.6129 |
b3412 |
bioH |
-9.55 |
0.050822 |
229 -- 245 |
38 -- 55 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________228_________________246\n_____________|___________________|\n5'-GGC...CAAAG_____________G_____CUUGU...ACG-3'\n______________GUC__AGGGGAAU_UUCAU\n______________|||__||:|||||_|||||\n______________CAG__UCUCCUUA_AAGUA\n3'-UUU...CCGGG___UU______________AAAAA...ACA-5'\n_____________|___________________|\n_____________56__________________37\n |
233 -- 239 |
43 -- 49 |
-15.7204 kcal/mol |
5.00086 kcal/mol |
1.17036 kcal/mol |
228 246@LB@ | |@LB@5'-GGC...CAAAG G CUUGU...ACG-3'@LB@ GUC AGGGGAAU UUCAU@LB@ ||| ||:||||| |||||@LB@ CAG UCUCCUUA AAGUA@LB@3'-UUU...CCGGG UU AAAAA...ACA-5'@LB@ | |@LB@ 56 37@LB@@LB@@LB@Energy -9.55 kcal/mol@LB@Hybridization Energy -15.7204 kcal/mol@LB@Unfolding Energy - mRNA 5.00086 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 229 -- 245@LB@Position - sRNA 38 -- 55@LB@Position Seed - mRNA 233 -- 239@LB@Position Seed - sRNA 43 -- 49@LB@ |
48 |
0.00943 |
0.6129 |
b3033 |
yqiB |
-8.72 |
0.074798 |
113 -- 121 |
44 -- 52 |
DUF1249 protein YqiB |
|
_____________112_______122\n_____________|_________|\n5'-UGG...GUAGA_________AAUCG...GCG-3'\n______________AGAGGGGAA\n______________|:||:||||\n______________UUUCUCCUU\n3'-UUU...GGCAG_________AAAGU...ACA-5'\n_____________|_________|\n_____________53________43\n |
115 -- 121 |
44 -- 50 |
-10.7393 kcal/mol |
1.15971 kcal/mol |
0.860683 kcal/mol |
112 122@LB@ | |@LB@5'-UGG...GUAGA AAUCG...GCG-3'@LB@ AGAGGGGAA@LB@ |:||:||||@LB@ UUUCUCCUU@LB@3'-UUU...GGCAG AAAGU...ACA-5'@LB@ | |@LB@ 53 43@LB@@LB@@LB@Energy -8.72 kcal/mol@LB@Hybridization Energy -10.7393 kcal/mol@LB@Unfolding Energy - mRNA 1.15971 kcal/mol@LB@Unfolding Energy - sRNA 0.860683 kcal/mol@LB@@LB@Position - mRNA 113 -- 121@LB@Position - sRNA 44 -- 52@LB@Position Seed - mRNA 115 -- 121@LB@Position Seed - sRNA 44 -- 50@LB@ |
49 |
0.009604 |
0.6129 |
b1175 |
minD |
-8.49 |
0.083180 |
191 -- 199 |
40 -- 48 |
inhibitor of FtsZ ring polymerization; chromosome-membrane tethering protein; membrane ATPase of the MinCDEE system |
|
_____________190_______200\n_____________|_________|\n5'-CUG...UAACA_________UAUGG...AAA-3'\n______________AGGAAUUUC\n______________|||||||||\n______________UCCUUAAAG\n3'-UUU...GUUUC_________UAAAA...ACA-5'\n_____________|_________|\n_____________49________39\n |
193 -- 199 |
40 -- 46 |
-11.0161 kcal/mol |
1.62901 kcal/mol |
0.898161 kcal/mol |
190 200@LB@ | |@LB@5'-CUG...UAACA UAUGG...AAA-3'@LB@ AGGAAUUUC@LB@ |||||||||@LB@ UCCUUAAAG@LB@3'-UUU...GUUUC UAAAA...ACA-5'@LB@ | |@LB@ 49 39@LB@@LB@@LB@Energy -8.49 kcal/mol@LB@Hybridization Energy -11.0161 kcal/mol@LB@Unfolding Energy - mRNA 1.62901 kcal/mol@LB@Unfolding Energy - sRNA 0.898161 kcal/mol@LB@@LB@Position - mRNA 191 -- 199@LB@Position - sRNA 40 -- 48@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 40 -- 46@LB@ |
50 |
0.009706 |
0.6129 |
b0109 |
nadC |
-3.48 |
0.624399 |
8 -- 15 |
22 -- 29 |
quinolinate phosphoribosyltransferase |
|
_____________7________16\n_____________|________|\n____5'-AGGCUAA________ACCAC...AAG-3'\n______________UAUUGUGC\n______________||||:|||\n______________AUAAUACG\n3'-UUU...AAAUA________GCAGU...ACA-5'\n_____________|________|\n_____________30_______21\n |
9 -- 15 |
22 -- 28 |
-7.42611 kcal/mol |
1.02369 kcal/mol |
2.92038 kcal/mol |
7 16@LB@ | |@LB@ 5'-AGGCUAA ACCAC...AAG-3'@LB@ UAUUGUGC@LB@ ||||:|||@LB@ AUAAUACG@LB@3'-UUU...AAAUA GCAGU...ACA-5'@LB@ | |@LB@ 30 21@LB@@LB@@LB@Energy -3.48 kcal/mol@LB@Hybridization Energy -7.42611 kcal/mol@LB@Unfolding Energy - mRNA 1.02369 kcal/mol@LB@Unfolding Energy - sRNA 2.92038 kcal/mol@LB@@LB@Position - mRNA 8 -- 15@LB@Position - sRNA 22 -- 29@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 22 -- 28@LB@ |
51 |
0.009714 |
0.6129 |
b1736 |
chbA |
-9.09 |
0.063099 |
186 -- 194 |
44 -- 52 |
N N'-diacetylchitobiose-specific enzyme IIA component of PTS |
|
_____________185_______195\n_____________|_________|\n5'-GGU...AGAAA_________CGAUG...GCC-3'\n______________AGAGAGGAA\n______________|:|||||||\n______________UUUCUCCUU\n3'-UUU...GGCAG_________AAAGU...ACA-5'\n_____________|_________|\n_____________53________43\n |
188 -- 194 |
44 -- 50 |
-11.469 kcal/mol |
1.52278 kcal/mol |
0.860683 kcal/mol |
185 195@LB@ | |@LB@5'-GGU...AGAAA CGAUG...GCC-3'@LB@ AGAGAGGAA@LB@ |:|||||||@LB@ UUUCUCCUU@LB@3'-UUU...GGCAG AAAGU...ACA-5'@LB@ | |@LB@ 53 43@LB@@LB@@LB@Energy -9.09 kcal/mol@LB@Hybridization Energy -11.469 kcal/mol@LB@Unfolding Energy - mRNA 1.52278 kcal/mol@LB@Unfolding Energy - sRNA 0.860683 kcal/mol@LB@@LB@Position - mRNA 186 -- 194@LB@Position - sRNA 44 -- 52@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 44 -- 50@LB@ |
52 |
0.01005 |
0.6177 |
b3985 |
rplJ |
-10.76 |
0.028819 |
17 -- 26 |
48 -- 57 |
50S ribosomal subunit protein L10 |
|
_____________16_________27\n_____________|__________|\n5'-UGG...GGCCU__________CCGCA...UAA-3'\n______________CCGUCGAAGA\n______________|||||:||||\n______________GGCAGUUUCU\n3'-UUU...AACCG__________CCUUA...ACA-5'\n_____________|__________|\n_____________58_________47\n |
20 -- 26 |
48 -- 54 |
-14.4896 kcal/mol |
0.999171 kcal/mol |
2.73483 kcal/mol |
16 27@LB@ | |@LB@5'-UGG...GGCCU CCGCA...UAA-3'@LB@ CCGUCGAAGA@LB@ |||||:||||@LB@ GGCAGUUUCU@LB@3'-UUU...AACCG CCUUA...ACA-5'@LB@ | |@LB@ 58 47@LB@@LB@@LB@Energy -10.76 kcal/mol@LB@Hybridization Energy -14.4896 kcal/mol@LB@Unfolding Energy - mRNA 0.999171 kcal/mol@LB@Unfolding Energy - sRNA 2.73483 kcal/mol@LB@@LB@Position - mRNA 17 -- 26@LB@Position - sRNA 48 -- 57@LB@Position Seed - mRNA 20 -- 26@LB@Position Seed - sRNA 48 -- 54@LB@ |
53 |
0.01077 |
0.6177 |
b3429 |
glgA |
-6.74 |
0.182373 |
105 -- 111 |
44 -- 50 |
glycogen synthase |
|
_____________104_____112\n_____________|_______|\n5'-GUA...AACGC_______GAUGC...ACG-3'\n______________AGAGGAA\n______________|||||||\n______________UCUCCUU\n3'-UUU...CAGUU_______AAAGU...ACA-5'\n_____________|_______|\n_____________51______43\n |
105 -- 111 |
44 -- 50 |
-9.00959 kcal/mol |
1.43957 kcal/mol |
0.825028 kcal/mol |
104 112@LB@ | |@LB@5'-GUA...AACGC GAUGC...ACG-3'@LB@ AGAGGAA@LB@ |||||||@LB@ UCUCCUU@LB@3'-UUU...CAGUU AAAGU...ACA-5'@LB@ | |@LB@ 51 43@LB@@LB@@LB@Energy -6.74 kcal/mol@LB@Hybridization Energy -9.00959 kcal/mol@LB@Unfolding Energy - mRNA 1.43957 kcal/mol@LB@Unfolding Energy - sRNA 0.825028 kcal/mol@LB@@LB@Position - mRNA 105 -- 111@LB@Position - sRNA 44 -- 50@LB@Position Seed - mRNA 105 -- 111@LB@Position Seed - sRNA 44 -- 50@LB@ |