Annotation Cluster 1 Enrichment Score: 2.83067918362 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0043228~non-membrane-bounded organelle 16 8.04020100503 0.00147679705077 947103,948490,947816,945549,949076,949057,947804,945472,947802,945190,947820,946446,945533,948484,946318,945998 89 115 1544 2.41367855398 0.0712302606632 0.0362729954304 1.41333355388 GOTERM_CC_FAT GO:0043232~intracellular non-membrane-bounded organelle 16 8.04020100503 0.00147679705077 947103,948490,947816,945549,949076,949057,947804,945472,947802,945190,947820,946446,945533,948484,946318,945998 89 115 1544 2.41367855398 0.0712302606632 0.0362729954304 1.41333355388 Annotation Cluster 2 Enrichment Score: 2.22211570621 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS ribosomal protein 11 5.52763819095 0.00090238207917 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057,945998 199 57 3598 3.4892003879 0.17568038895 0.17568038895 1.1375613307 GOTERM_CC_FAT GO:0005840~ribosome 11 5.52763819095 0.00134365684453 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057,945998 89 59 1544 3.23443153685 0.0650180157315 0.0650180157315 1.28665316519 GOTERM_CC_FAT GO:0030529~ribonucleoprotein complex 11 5.52763819095 0.00175360120561 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057,945998 89 61 1544 3.12838460122 0.0840165921784 0.0288286344948 1.67624126175 SP_PIR_KEYWORDS ribosome 10 5.02512562814 0.00269260637981 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 199 55 3598 3.28734582001 0.438416565941 0.174966792125 3.35915476151 KEGG_PATHWAY ecp03010:Ribosome 10 5.02512562814 0.00345747304703 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 47 1269 3.06818181818 0.974905977552 0.974905977552 5.36609100234 SP_PIR_KEYWORDS ribonucleoprotein 10 5.02512562814 0.00346299769481 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 199 57 3598 3.17200035264 0.524014391103 0.169387513387 4.30094969511 KEGG_PATHWAY ecl03010:Ribosome 10 5.02512562814 0.00464870954593 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 49 1269 2.94294990724 0.992971342073 0.916162908406 7.15154262314 KEGG_PATHWAY ecy03010:Ribosome 10 5.02512562814 0.00464870954593 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 49 1269 2.94294990724 0.992971342073 0.916162908406 7.15154262314 SP_PIR_KEYWORDS protein biosynthesis 13 6.53266331658 0.00530872585256 947780,945190,947802,947820,946969,947103,948490,947816,948484,946318,948482,947804,949057 199 95 3598 2.47416027506 0.679890957225 0.172915928257 6.52304759079 KEGG_PATHWAY ecs03010:Ribosome 10 5.02512562814 0.00535374092678 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 50 1269 2.88409090909 0.996692899522 0.851012741091 8.19333602857 KEGG_PATHWAY ecw03010:Ribosome 10 5.02512562814 0.00613935833912 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 51 1269 2.82754010695 0.998573329283 0.805651614665 9.3412984258 KEGG_PATHWAY ecd03010:Ribosome 10 5.02512562814 0.00613935833912 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 51 1269 2.82754010695 0.998573329283 0.805651614665 9.3412984258 GOTERM_MF_FAT GO:0003735~structural constituent of ribosome 10 5.02512562814 0.00641265468557 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 144 57 2354 2.8679337232 0.844206657805 0.605293346655 8.19271430042 KEGG_PATHWAY ecq03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY eck03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY eci03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY ecz03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY eum03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY ecr03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY ecf03010:Ribosome 10 5.02512562814 0.00701146656752 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 52 1269 2.77316433566 0.999439385356 0.776265536106 10.5998811604 KEGG_PATHWAY ece03010:Ribosome 10 5.02512562814 0.00797608198082 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 53 1269 2.72084048027 0.999800675616 0.758309226442 11.9728843327 KEGG_PATHWAY ecm03010:Ribosome 10 5.02512562814 0.00797608198082 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 53 1269 2.72084048027 0.999800675616 0.758309226442 11.9728843327 KEGG_PATHWAY ecg03010:Ribosome 10 5.02512562814 0.00797608198082 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 53 1269 2.72084048027 0.999800675616 0.758309226442 11.9728843327 KEGG_PATHWAY ect03010:Ribosome 10 5.02512562814 0.00797608198082 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 53 1269 2.72084048027 0.999800675616 0.758309226442 11.9728843327 KEGG_PATHWAY ecx03010:Ribosome 10 5.02512562814 0.00797608198082 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 53 1269 2.72084048027 0.999800675616 0.758309226442 11.9728843327 GOTERM_MF_FAT GO:0005198~structural molecule activity 11 5.52763819095 0.0113670112225 945190,947802,947820,946446,947103,948490,947816,948484,946318,947804,949057 144 73 2354 2.46328006088 0.963259648781 0.667559111362 14.0923276852 KEGG_PATHWAY ecj03010:Ribosome 10 5.02512562814 0.0114863198665 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 56 1269 2.57508116883 0.999995412504 0.827269926482 16.8042434642 KEGG_PATHWAY eco03010:Ribosome 10 5.02512562814 0.0114863198665 945190,947802,947820,947103,948490,947816,948484,946318,947804,949057 88 56 1269 2.57508116883 0.999995412504 0.827269926482 16.8042434642 KEGG_PATHWAY ecc03010:Ribosome 9 4.52261306533 0.0155365359337 945190,947802,947820,947103,948490,947816,948484,946318,947804 88 49 1269 2.64865491651 0.999999941873 0.875391634435 22.0697088568 GOTERM_BP_FAT GO:0006412~translation 13 6.53266331658 0.0340381983054 947780,945190,947802,947820,946969,947103,948490,947816,948484,946318,948482,947804,949057 148 115 2508 1.91562867215 0.999999670588 0.949470158295 38.6318806049 Annotation Cluster 3 Enrichment Score: 2.06203219983 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SMART SM00411:BHL 3 1.50753768844 0.00769209372374 945533,945472,949095 30 3 554 18.4666666667 0.162724491472 0.162724491472 5.93705859331 INTERPRO IPR000119:Histone-like bacterial DNA-binding protein 3 1.50753768844 0.00912911871306 945533,945472,949095 192 3 3389 17.6510416667 0.977965690154 0.977965690154 12.0716760484 PIR_SUPERFAMILY PIRSF002095:DNA-binding protein HU,alpha/beta subunits 3 1.50753768844 0.00927747897281 945533,945472,949095 165 3 2885 17.4848484848 0.823364255051 0.823364255051 10.9023330148 Annotation Cluster 4 Enrichment Score: 1.77955212913 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0015768~maltose transport 3 1.50753768844 0.00984521946442 948538,948537,948548 148 3 2508 16.9459459459 0.985938514819 0.985938514819 13.0207444456 GOTERM_BP_FAT GO:0000017~alpha-glucoside transport 3 1.50753768844 0.0189344846056 948538,948537,948548 148 4 2508 12.7094594595 0.99973585493 0.935837565122 23.6259051961 GOTERM_BP_FAT GO:0015766~disaccharide transport 3 1.50753768844 0.0189344846056 948538,948537,948548 148 4 2508 12.7094594595 0.99973585493 0.935837565122 23.6259051961 GOTERM_BP_FAT GO:0042946~glucoside transport 3 1.50753768844 0.0189344846056 948538,948537,948548 148 4 2508 12.7094594595 0.99973585493 0.935837565122 23.6259051961 GOTERM_BP_FAT GO:0015772~oligosaccharide transport 3 1.50753768844 0.0189344846056 948538,948537,948548 148 4 2508 12.7094594595 0.99973585493 0.935837565122 23.6259051961 Annotation Cluster 5 Enrichment Score: 1.47674433521 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0046395~carboxylic acid catabolic process 7 3.5175879397 0.0333622755327 946261,946013,946891,946778,947082,948139,947384 148 42 2508 2.82432432432 0.99999955468 0.974167407227 38.0236402677 GOTERM_BP_FAT GO:0016054~organic acid catabolic process 7 3.5175879397 0.0333622755327 946261,946013,946891,946778,947082,948139,947384 148 42 2508 2.82432432432 0.99999955468 0.974167407227 38.0236402677 Annotation Cluster 6 Enrichment Score: 1.41656043421 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006970~response to osmotic stress 6 3.01507537688 0.0156168907279 945005,947210,948482,947043,948950,945422 148 26 2508 3.9106029106 0.99886825127 0.966358526639 19.9026848149 GOTERM_BP_FAT GO:0009628~response to abiotic stimulus 8 4.02010050251 0.0940339241328 945005,947210,946574,946571,948482,947043,948950,945422 148 67 2508 2.02339653086 1.0 0.991166389324 75.1515318267 Annotation Cluster 7 Enrichment Score: 1.38446183689 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY eci00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0254654912336 945021,946778,947947 88 4 1269 10.8153409091 0.999999999999 0.952621345057 33.6867851427 KEGG_PATHWAY ecc00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY eum00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecf00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY eco00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecq00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecz00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecd00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecr00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ece00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecg00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecm00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ecj00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0405643928379 945021,946778,947947 88 5 1269 8.65227272727 1.0 0.987796495954 48.2858894553 KEGG_PATHWAY ect00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0581688281537 945021,946778,947947 88 6 1269 7.21022727273 1.0 0.992590394563 61.4937687364 KEGG_PATHWAY eck00430:Taurine and hypotaurine metabolism 3 1.50753768844 0.0581688281537 945021,946778,947947 88 6 1269 7.21022727273 1.0 0.992590394563 61.4937687364 Annotation Cluster 8 Enrichment Score: 1.24930301667 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS translation regulation 4 2.01005025126 0.0195041512762 947802,945533,948490,945472 199 11 3598 6.57469164002 0.985229592289 0.452373267068 22.0897880824 GOTERM_BP_FAT GO:0006417~regulation of translation 4 2.01005025126 0.0733089024918 947802,945533,948490,945472 148 17 2508 3.98728139905 1.0 0.990792533385 65.8178154896 GOTERM_BP_FAT GO:0032268~regulation of cellular protein metabolic process 4 2.01005025126 0.0733089024918 947802,945533,948490,945472 148 17 2508 3.98728139905 1.0 0.990792533385 65.8178154896 GOTERM_BP_FAT GO:0010608~posttranscriptional regulation of gene expression 4 2.01005025126 0.096016847136 947802,945533,948490,945472 148 19 2508 3.56756756757 1.0 0.987102352124 75.9074621721 Annotation Cluster 9 Enrichment Score: 1.22867282215 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS rrna-binding 6 3.01507537688 0.0498524485466 945190,947802,947820,948484,947804,949057 199 37 3598 2.93195708271 0.99998232801 0.665243864962 47.693948573 GOTERM_MF_FAT GO:0019843~rRNA binding 6 3.01507537688 0.0699790208923 945190,947802,947820,948484,947804,949057 144 37 2354 2.6509009009 0.999999999216 0.949973457771 61.8612064742 Annotation Cluster 10 Enrichment Score: 1.14576704564 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS sugar transport 11 5.52763819095 0.0437840300206 2847725,947648,947649,948538,948537,948548,947397,946244,945339,945982,948594 199 99 3598 2.00893355667 0.999930978812 0.698093263277 43.2989274461 GOTERM_BP_FAT GO:0008643~carbohydrate transport 11 5.52763819095 0.116721316096 2847725,947648,947649,948538,948537,948548,947397,946244,945339,945982,948594 148 112 2508 1.66433397683 1.0 0.992272983639 82.6217885819 Annotation Cluster 11 Enrichment Score: 1.08936403672 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0016407~acetyltransferase activity 6 3.01507537688 0.0634962817107 946010,946778,948514,948126,947943,945998 144 36 2354 2.72453703704 0.999999994162 0.957566595821 58.1736196931 SP_PIR_KEYWORDS Acyltransferase 8 4.02010050251 0.104357491805 946261,946010,946778,948514,948126,947943,945998,947947 199 73 3598 1.98141391891 0.999999999943 0.837046579176 75.25908425 Annotation Cluster 12 Enrichment Score: 1.0560379729 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0016410~N-acyltransferase activity 5 2.51256281407 0.0610056145943 946261,946010,948514,947943,945998 144 25 2354 3.26944444444 0.999999987422 0.973702095859 56.6712105739 INTERPRO IPR016181:Acyl-CoA N-acyltransferase 4 2.01005025126 0.0668495905416 946010,948514,947943,945998 192 17 3389 4.15318627451 1.0 0.999999437732 62.1128209498 COG_ONTOLOGY Translation,ribosomal structure and biogenesis 3 1.50753768844 0.0833520205161 946010,947943,945998 30 9 525 5.83333333333 0.704310299905 0.704310299905 44.633677539 UP_SEQ_FEATURE domain:N-acetyltransferase 4 2.01005025126 0.0939745592682 946010,948514,947943,945998 199 20 3597 3.61507537688 1.0 1.0 73.9484552813 INTERPRO IPR000182:GCN5-related N-acetyltransferase 4 2.01005025126 0.0992020973963 946010,948514,947943,945998 192 20 3389 3.53020833333 1.0 0.999832120805 76.9044363581 GOTERM_MF_FAT GO:0008080~N-acetyltransferase activity 4 2.01005025126 0.145497764434 946010,948514,947943,945998 144 22 2354 2.97222222222 1.0 0.99358443244 87.6211112058 Annotation Cluster 13 Enrichment Score: 0.927190553379 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecg02060:Phosphotransferase system (PTS) 6 3.01507537688 0.0491941116563 947648,947649,947397,946244,945339,945982 88 30 1269 2.88409090909 1.0 0.99239873937 55.2161572489 KEGG_PATHWAY ecq02060:Phosphotransferase system (PTS) 6 3.01507537688 0.0555843394152 947648,947649,947397,946244,945339,945982 88 31 1269 2.79105571848 1.0 0.993722279642 59.7761890565 SP_PIR_KEYWORDS Phosphotransferase system 7 3.5175879397 0.0686584804099 947648,947649,947397,946244,945339,948937,945982 199 53 3598 2.38797762397 0.999999754914 0.749372371886 59.399990622 KEGG_PATHWAY ect02060:Phosphotransferase system (PTS) 6 3.01507537688 0.0697459446824 947648,947649,947397,946244,945339,945982 88 33 1269 2.62190082645 1.0 0.995891157749 68.3777961274 KEGG_PATHWAY eck02060:Phosphotransferase system (PTS) 6 3.01507537688 0.0775130459612 947648,947649,947397,946244,945339,945982 88 34 1269 2.54478609626 1.0 0.99673026521 72.3302512811 KEGG_PATHWAY ecr02060:Phosphotransferase system (PTS) 6 3.01507537688 0.0775130459612 947648,947649,947397,946244,945339,945982 88 34 1269 2.54478609626 1.0 0.99673026521 72.3302512811 KEGG_PATHWAY eum02060:Phosphotransferase system (PTS) 6 3.01507537688 0.103490152461 947648,947649,947397,946244,945339,945982 88 37 1269 2.33845208845 1.0 0.999300300153 82.4427018102 KEGG_PATHWAY ecz02060:Phosphotransferase system (PTS) 6 3.01507537688 0.113010708996 947648,947649,947397,946244,945339,945982 88 38 1269 2.2769138756 1.0 0.999450075473 85.1877778359 KEGG_PATHWAY ecd02060:Phosphotransferase system (PTS) 6 3.01507537688 0.113010708996 947648,947649,947397,946244,945339,945982 88 38 1269 2.2769138756 1.0 0.999450075473 85.1877778359 GOTERM_MF_FAT GO:0008982~protein-N(PI)-phosphohistidine-sugar phosphotransferase activity 6 3.01507537688 0.134074061207 947648,947649,947397,946244,945339,945982 144 45 2354 2.17962962963 1.0 0.994485678768 85.2322497278 KEGG_PATHWAY ecj02060:Phosphotransferase system (PTS) 6 3.01507537688 0.143982661848 947648,947649,947397,946244,945339,945982 88 41 1269 2.11031042129 1.0 0.999744098841 91.589713163 KEGG_PATHWAY eco02060:Phosphotransferase system (PTS) 6 3.01507537688 0.155059090133 947648,947649,947397,946244,945339,945982 88 42 1269 2.06006493506 1.0 0.999587975758 93.1650139157 KEGG_PATHWAY ecf02060:Phosphotransferase system (PTS) 5 2.51256281407 0.157770953414 947648,947649,946244,945339,945982 88 31 1269 2.3258797654 1.0 0.999505606362 93.5061101738 KEGG_PATHWAY ecm02060:Phosphotransferase system (PTS) 5 2.51256281407 0.199796541677 947648,947649,946244,945339,945982 88 34 1269 2.12065508021 1.0 0.999846757344 97.1258855458 GOTERM_BP_FAT GO:0009401~phosphoenolpyruvate-dependent sugar phosphotransferase system 6 3.01507537688 0.2068598766 947648,947649,947397,946244,945339,945982 148 54 2508 1.88288288288 1.0 0.994790063765 96.1903600602 KEGG_PATHWAY ecw02060:Phosphotransferase system (PTS) 5 2.51256281407 0.214514638797 947648,947649,946244,945339,945982 88 35 1269 2.06006493506 1.0 0.999896426743 97.8614737396 KEGG_PATHWAY ecx02060:Phosphotransferase system (PTS) 4 2.01005025126 0.397094282663 947648,947649,945339,945982 88 33 1269 1.7479338843 1.0 0.999996348676 99.9683366819 Annotation Cluster 14 Enrichment Score: 0.807172228937 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0043190~ATP-binding cassette (ABC) transporter complex 3 1.50753768844 0.0890556844013 948537,946323,946889 89 9 1544 5.78277153558 0.990568266806 0.688363816744 59.2761435878 PIR_SUPERFAMILY PIRSF002759:inner membrane protein MalK 3 1.50753768844 0.272893943073 948537,946323,946889 165 18 2885 2.91414141414 1.0 1.0 98.0684718355 Annotation Cluster 15 Enrichment Score: 0.78078738311 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009250~glucan biosynthetic process 3 1.50753768844 0.132684025738 945005,947940,947932 148 11 2508 4.62162162162 1.0 0.991080485459 86.5621028638 GOTERM_BP_FAT GO:0006073~cellular glucan metabolic process 3 1.50753768844 0.1745844449 945005,947940,947932 148 13 2508 3.9106029106 1.0 0.994306629041 93.3146247717 GOTERM_BP_FAT GO:0044042~glucan metabolic process 3 1.50753768844 0.196251807077 945005,947940,947932 148 14 2508 3.63127413127 1.0 0.996068908232 95.4054887822 Annotation Cluster 16 Enrichment Score: 0.729893043526 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0044264~cellular polysaccharide metabolic process 11 5.52763819095 0.0759291703704 948136,947692,945005,946574,946571,944945,946565,947940,947932,945526,946467 148 103 2508 1.80976121753 1.0 0.985797299292 67.1556074558 GOTERM_BP_FAT GO:0033692~cellular polysaccharide biosynthetic process 10 5.02512562814 0.122251682143 948136,947692,945005,946574,946571,946565,947940,947932,945526,946467 148 99 2508 1.71171171171 1.0 0.990752179819 84.0945762674 GOTERM_BP_FAT GO:0034637~cellular carbohydrate biosynthetic process 12 6.03015075377 0.141227689179 947648,947649,948136,947692,945005,946574,946571,946565,947940,947932,945526,946467 148 131 2508 1.552300392 1.0 0.990787276853 88.3127280785 GOTERM_BP_FAT GO:0005976~polysaccharide metabolic process 14 7.0351758794 0.233631704538 945494,945005,946574,946571,946565,948136,947692,947655,944945,947940,947932,945526,949131,946467 148 177 2508 1.34035730646 1.0 0.995751673638 97.6523862923 GOTERM_BP_FAT GO:0016051~carbohydrate biosynthetic process 13 6.53266331658 0.355767701672 945005,946574,946571,946565,947648,947649,948136,947655,947692,947940,947932,945526,946467 148 179 2508 1.23071115809 1.0 0.997320578155 99.7969541449 GOTERM_BP_FAT GO:0000271~polysaccharide biosynthetic process 11 5.52763819095 0.383142291054 948136,947692,945005,947655,946574,946571,946565,947940,947932,945526,946467 148 150 2508 1.2427027027 1.0 0.997392177067 99.8899188929 Annotation Cluster 17 Enrichment Score: 0.720667776345 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR INTERPRO IPR000836:Phosphoribosyltransferase 3 1.50753768844 0.0706834535228 948157,947915,946979 192 8 3389 6.619140625 1.0 0.999961508732 64.2388812753 GOTERM_BP_FAT GO:0009116~nucleoside metabolic process 4 2.01005025126 0.512090461829 948157,947915,948987,946979 148 46 2508 1.47356051704 1.0 0.998409452273 99.995965969 Annotation Cluster 18 Enrichment Score: 0.718199326367 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS P-loop 12 6.03015075377 0.166595263825 944833,948537,945681,946323,948482,949076,945549,945504,945097,946889,945741,945422 199 144 3598 1.5067001675 1.0 0.899140629068 90.068182874 SP_PIR_KEYWORDS nucleotide binding 11 5.52763819095 0.219754965331 944833,948537,945681,946323,948482,949076,945549,945504,946889,945741,945422 199 137 3598 1.4517111103 1.0 0.920240447289 95.6920332811 Annotation Cluster 19 Enrichment Score: 0.702810105377 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecf00052:Galactose metabolism 4 2.01005025126 0.13620107429 947648,947649,947644,949131 88 19 1269 3.03588516746 1.0 0.999725141649 90.2860444757 KEGG_PATHWAY ecq00052:Galactose metabolism 4 2.01005025126 0.13620107429 947648,947649,947644,949131 88 19 1269 3.03588516746 1.0 0.999725141649 90.2860444757 KEGG_PATHWAY ecm00052:Galactose metabolism 4 2.01005025126 0.152677147009 947648,947649,947644,949131 88 20 1269 2.88409090909 1.0 0.999668728463 92.8516340301 KEGG_PATHWAY ece00052:Galactose metabolism 4 2.01005025126 0.169752696086 947648,947649,947644,949131 88 21 1269 2.74675324675 1.0 0.999635690839 94.8309568121 KEGG_PATHWAY ecg00052:Galactose metabolism 4 2.01005025126 0.169752696086 947648,947649,947644,949131 88 21 1269 2.74675324675 1.0 0.999635690839 94.8309568121 KEGG_PATHWAY eck00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY ecx00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY eci00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY ecc00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY ecr00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY ect00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY ecw00052:Galactose metabolism 4 2.01005025126 0.187355374968 947648,947649,947644,949131 88 22 1269 2.62190082645 1.0 0.999794478116 96.3254610958 KEGG_PATHWAY ecv00052:Galactose metabolism 4 2.01005025126 0.22385911518 947648,947649,947644,949131 88 24 1269 2.40340909091 1.0 0.999908386991 98.2325552062 KEGG_PATHWAY eum00052:Galactose metabolism 4 2.01005025126 0.261642207954 947648,947649,947644,949131 88 26 1269 2.21853146853 1.0 0.999958325233 99.2016367182 KEGG_PATHWAY ecz00052:Galactose metabolism 4 2.01005025126 0.261642207954 947648,947649,947644,949131 88 26 1269 2.21853146853 1.0 0.999958325233 99.2016367182 KEGG_PATHWAY ecd00052:Galactose metabolism 4 2.01005025126 0.261642207954 947648,947649,947644,949131 88 26 1269 2.21853146853 1.0 0.999958325233 99.2016367182 KEGG_PATHWAY ecj00052:Galactose metabolism 4 2.01005025126 0.280853517253 947648,947649,947644,949131 88 27 1269 2.13636363636 1.0 0.999966945877 99.4753476138 KEGG_PATHWAY eco00052:Galactose metabolism 4 2.01005025126 0.300198470443 947648,947649,947644,949131 88 28 1269 2.06006493506 1.0 0.999980625229 99.6601519136 Annotation Cluster 20 Enrichment Score: 0.681795759586 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0046377~colanic acid metabolic process 4 2.01005025126 0.208067495881 946574,946571,946565,946467 148 27 2508 2.51051051051 1.0 0.993442624828 96.2713333611 GOTERM_BP_FAT GO:0009242~colanic acid biosynthetic process 4 2.01005025126 0.208067495881 946574,946571,946565,946467 148 27 2508 2.51051051051 1.0 0.993442624828 96.2713333611 Annotation Cluster 21 Enrichment Score: 0.666286121809 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SMART SM00421:HTH_LUXR 3 1.50753768844 0.201852237775 949119,948896,946467 30 16 554 3.4625 0.994403507733 0.925190292966 83.2553295252 UP_SEQ_FEATURE domain:HTH luxR-type 3 1.50753768844 0.21896829208 949119,948896,946467 199 16 3597 3.38913316583 1.0 0.999999999334 96.5557174292 INTERPRO IPR000792:Transcription regulator LuxR,C-terminal 3 1.50753768844 0.226843758926 949119,948896,946467 192 16 3389 3.3095703125 1.0 0.999999770975 97.2919773655 Annotation Cluster 22 Enrichment Score: 0.62319217617 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006790~sulfur metabolic process 8 4.02010050251 0.236705067497 945021,944881,947916,948126,948435,946889,947947,947239 148 86 2508 1.57636706474 1.0 0.994966882565 97.7816969277 GOTERM_BP_FAT GO:0044272~sulfur compound biosynthetic process 6 3.01507537688 0.239556573237 944881,947916,948126,948435,947947,947239 148 57 2508 1.78378378378 1.0 0.994093947302 97.8957246024 Annotation Cluster 23 Enrichment Score: 0.583509323513 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006310~DNA recombination 5 2.51256281407 0.204335318602 945533,949076,945472,946976,947294 148 40 2508 2.11824324324 1.0 0.995802053188 96.0157782423 SP_PIR_KEYWORDS dna recombination 4 2.01005025126 0.256683005683 945533,949076,945472,946976 199 32 3598 2.26005025126 1.0 0.944169056418 97.6696390075 GOTERM_CC_FAT GO:0005694~chromosome 3 1.50753768844 0.338634712241 945533,949076,945472 89 21 1544 2.47833065811 0.999999998948 0.983989165472 98.1353552633 Annotation Cluster 24 Enrichment Score: 0.529443368591 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecy03070:Bacterial secretion system 3 1.50753768844 0.122162021362 949120,948321,945374 88 9 1269 4.80681818182 1.0 0.999547977232 87.4427196759 KEGG_PATHWAY ecy03060:Protein export 3 1.50753768844 0.122162021362 949120,948321,945374 88 9 1269 4.80681818182 1.0 0.999547977232 87.4427196759 KEGG_PATHWAY ecl03060:Protein export 3 1.50753768844 0.122162021362 949120,948321,945374 88 9 1269 4.80681818182 1.0 0.999547977232 87.4427196759 KEGG_PATHWAY ecl03070:Bacterial secretion system 3 1.50753768844 0.122162021362 949120,948321,945374 88 9 1269 4.80681818182 1.0 0.999547977232 87.4427196759 KEGG_PATHWAY ecp03070:Bacterial secretion system 3 1.50753768844 0.146134514815 949120,948321,945374 88 10 1269 4.32613636364 1.0 0.999666010675 91.9201448304 KEGG_PATHWAY ecp03060:Protein export 3 1.50753768844 0.146134514815 949120,948321,945374 88 10 1269 4.32613636364 1.0 0.999666010675 91.9201448304 KEGG_PATHWAY ecs03070:Bacterial secretion system 3 1.50753768844 0.146134514815 949120,948321,945374 88 10 1269 4.32613636364 1.0 0.999666010675 91.9201448304 KEGG_PATHWAY ecs03060:Protein export 3 1.50753768844 0.146134514815 949120,948321,945374 88 10 1269 4.32613636364 1.0 0.999666010675 91.9201448304 KEGG_PATHWAY ecc03070:Bacterial secretion system 3 1.50753768844 0.248531806208 949120,948321,945374 88 14 1269 3.0900974026 1.0 0.999944927894 98.9433669589 KEGG_PATHWAY ecc03060:Protein export 3 1.50753768844 0.248531806208 949120,948321,945374 88 14 1269 3.0900974026 1.0 0.999944927894 98.9433669589 KEGG_PATHWAY ece03070:Bacterial secretion system 3 1.50753768844 0.274807863391 949120,948321,945374 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY ecv03060:Protein export 3 1.50753768844 0.274807863391 949120,948321,945374 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY ect03070:Bacterial secretion system 3 1.50753768844 0.274807863391 949120,948321,945374 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY eum03070:Bacterial secretion system 3 1.50753768844 0.274807863391 949120,948321,945374 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY ecr03070:Bacterial secretion system 3 1.50753768844 0.274807863391 949120,948321,945374 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY eck03070:Bacterial secretion system 3 1.50753768844 0.274807863391 949120,948321,945374 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY ecq03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecj03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecw03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ece03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecd03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY eci03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY eco03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecg03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecm03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ect03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecz03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY eum03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecr03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecf03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY eck03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecx03060:Protein export 3 1.50753768844 0.301052489884 949120,948321,945374 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecx03070:Bacterial secretion system 3 1.50753768844 0.352991504806 949120,948321,945374 88 18 1269 2.40340909091 1.0 0.999990663039 99.9025427046 KEGG_PATHWAY ecq03070:Bacterial secretion system 3 1.50753768844 0.475797670021 949120,948321,945374 88 23 1269 1.88092885375 1.0 0.999998594024 99.9965870586 KEGG_PATHWAY ecg03070:Bacterial secretion system 3 1.50753768844 0.520968804788 949120,948321,945374 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ecf03070:Bacterial secretion system 3 1.50753768844 0.520968804788 949120,948321,945374 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ecw03070:Bacterial secretion system 3 1.50753768844 0.542579354523 949120,948321,945374 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecv03070:Bacterial secretion system 3 1.50753768844 0.542579354523 949120,948321,945374 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY eci03070:Bacterial secretion system 3 1.50753768844 0.542579354523 949120,948321,945374 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecz03070:Bacterial secretion system 3 1.50753768844 0.542579354523 949120,948321,945374 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecm03070:Bacterial secretion system 3 1.50753768844 0.542579354523 949120,948321,945374 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecd03070:Bacterial secretion system 3 1.50753768844 0.563517421506 949120,948321,945374 88 27 1269 1.60227272727 1.0 0.999999809725 99.9998152383 KEGG_PATHWAY ecj03070:Bacterial secretion system 3 1.50753768844 0.583772725433 949120,948321,945374 88 28 1269 1.5450487013 1.0 0.999999896084 99.9999133067 KEGG_PATHWAY eco03070:Bacterial secretion system 3 1.50753768844 0.583772725433 949120,948321,945374 88 28 1269 1.5450487013 1.0 0.999999896084 99.9999133067 Annotation Cluster 25 Enrichment Score: 0.519490622032 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecx00500:Starch and sucrose metabolism 4 2.01005025126 0.242623432518 946571,947940,947932,949131 88 25 1269 2.30727272727 1.0 0.999947568278 98.803017081 KEGG_PATHWAY ecf00500:Starch and sucrose metabolism 4 2.01005025126 0.261642207954 946571,947940,947932,949131 88 26 1269 2.21853146853 1.0 0.999958325233 99.2016367182 KEGG_PATHWAY eum00500:Starch and sucrose metabolism 4 2.01005025126 0.280853517253 946571,947940,947932,949131 88 27 1269 2.13636363636 1.0 0.999966945877 99.4753476138 KEGG_PATHWAY ecw00500:Starch and sucrose metabolism 4 2.01005025126 0.280853517253 946571,947940,947932,949131 88 27 1269 2.13636363636 1.0 0.999966945877 99.4753476138 KEGG_PATHWAY ecm00500:Starch and sucrose metabolism 4 2.01005025126 0.280853517253 946571,947940,947932,949131 88 27 1269 2.13636363636 1.0 0.999966945877 99.4753476138 KEGG_PATHWAY ecc00500:Starch and sucrose metabolism 4 2.01005025126 0.300198470443 946571,947940,947932,949131 88 28 1269 2.06006493506 1.0 0.999980625229 99.6601519136 KEGG_PATHWAY eci00500:Starch and sucrose metabolism 4 2.01005025126 0.300198470443 946571,947940,947932,949131 88 28 1269 2.06006493506 1.0 0.999980625229 99.6601519136 KEGG_PATHWAY ecq00500:Starch and sucrose metabolism 4 2.01005025126 0.300198470443 946571,947940,947932,949131 88 28 1269 2.06006493506 1.0 0.999980625229 99.6601519136 KEGG_PATHWAY ecd00500:Starch and sucrose metabolism 4 2.01005025126 0.300198470443 946571,947940,947932,949131 88 28 1269 2.06006493506 1.0 0.999980625229 99.6601519136 KEGG_PATHWAY ece00500:Starch and sucrose metabolism 4 2.01005025126 0.300198470443 946571,947940,947932,949131 88 28 1269 2.06006493506 1.0 0.999980625229 99.6601519136 KEGG_PATHWAY ecz00500:Starch and sucrose metabolism 4 2.01005025126 0.31962136462 946571,947940,947932,949131 88 29 1269 1.98902821317 1.0 0.999984495719 99.7829204844 KEGG_PATHWAY ect00500:Starch and sucrose metabolism 4 2.01005025126 0.31962136462 946571,947940,947932,949131 88 29 1269 1.98902821317 1.0 0.999984495719 99.7829204844 KEGG_PATHWAY eck00500:Starch and sucrose metabolism 4 2.01005025126 0.31962136462 946571,947940,947932,949131 88 29 1269 1.98902821317 1.0 0.999984495719 99.7829204844 KEGG_PATHWAY ecv00500:Starch and sucrose metabolism 4 2.01005025126 0.31962136462 946571,947940,947932,949131 88 29 1269 1.98902821317 1.0 0.999984495719 99.7829204844 KEGG_PATHWAY ecr00500:Starch and sucrose metabolism 4 2.01005025126 0.31962136462 946571,947940,947932,949131 88 29 1269 1.98902821317 1.0 0.999984495719 99.7829204844 KEGG_PATHWAY eco00500:Starch and sucrose metabolism 4 2.01005025126 0.339069784704 946571,947940,947932,949131 88 30 1269 1.92272727273 1.0 0.999987598448 99.863212205 KEGG_PATHWAY ecg00500:Starch and sucrose metabolism 4 2.01005025126 0.339069784704 946571,947940,947932,949131 88 30 1269 1.92272727273 1.0 0.999987598448 99.863212205 KEGG_PATHWAY ecj00500:Starch and sucrose metabolism 4 2.01005025126 0.339069784704 946571,947940,947932,949131 88 30 1269 1.92272727273 1.0 0.999987598448 99.863212205 Annotation Cluster 26 Enrichment Score: 0.509341346682 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ece00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.248531806208 946946,948869,947331 88 14 1269 3.0900974026 1.0 0.999944927894 98.9433669589 KEGG_PATHWAY ecv00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.274807863391 946946,948869,947331 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY ecc00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.274807863391 946946,948869,947331 88 15 1269 2.88409090909 1.0 0.999968328458 99.4005276157 KEGG_PATHWAY eci00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.301052489884 946946,948869,947331 88 16 1269 2.70383522727 1.0 0.999974737716 99.6666967078 KEGG_PATHWAY ecm00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.327147705627 946946,948869,947331 88 17 1269 2.54478609626 1.0 0.999984803182 99.818160536 KEGG_PATHWAY ecw00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.327147705627 946946,948869,947331 88 17 1269 2.54478609626 1.0 0.999984803182 99.818160536 KEGG_PATHWAY ecx00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.327147705627 946946,948869,947331 88 17 1269 2.54478609626 1.0 0.999984803182 99.818160536 KEGG_PATHWAY ecf00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.327147705627 946946,948869,947331 88 17 1269 2.54478609626 1.0 0.999984803182 99.818160536 KEGG_PATHWAY eco00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.352991504806 946946,948869,947331 88 18 1269 2.40340909091 1.0 0.999990663039 99.9025427046 KEGG_PATHWAY ecj00760:Nicotinate and nicotinamide metabolism 3 1.50753768844 0.352991504806 946946,948869,947331 88 18 1269 2.40340909091 1.0 0.999990663039 99.9025427046 Annotation Cluster 27 Enrichment Score: 0.480042986654 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS intramolecular transferase 3 1.50753768844 0.198279135324 947692,946574,947687 199 15 3598 3.61608040201 1.0 0.906017262183 93.9226898286 GOTERM_MF_FAT GO:0016866~intramolecular transferase activity 3 1.50753768844 0.552887804394 947692,946574,947687 144 30 2354 1.63472222222 1.0 0.999132047106 99.9977346939 Annotation Cluster 28 Enrichment Score: 0.459728793406 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS amino-acid biosynthesis 9 4.52261306533 0.137294063544 947927,946516,946549,946680,948126,948435,945605,2847759,947239 199 93 3598 1.74971632355 1.0 0.87838818944 84.6111496418 GOTERM_BP_FAT GO:0046394~carboxylic acid biosynthetic process 15 7.53768844221 0.407112663968 947264,947927,945645,947916,946383,946680,946549,947239,946516,947495,948591,948126,948435,945605,2847759 148 219 2508 1.16068122917 1.0 0.998085865652 99.9370464029 GOTERM_BP_FAT GO:0016053~organic acid biosynthetic process 15 7.53768844221 0.407112663968 947264,947927,945645,947916,946383,946680,946549,947239,946516,947495,948591,948126,948435,945605,2847759 148 219 2508 1.16068122917 1.0 0.998085865652 99.9370464029 GOTERM_BP_FAT GO:0009309~amine biosynthetic process 14 7.0351758794 0.418342278834 947264,947927,946383,946680,946549,947239,946516,946323,948591,948126,948435,2847759,945605,945422 148 204 2508 1.16295707472 1.0 0.997857928394 99.9519239541 GOTERM_BP_FAT GO:0008652~cellular amino acid biosynthetic process 12 6.03015075377 0.528132984038 947927,947264,946516,946383,946549,946680,948126,948591,948435,945605,2847759,947239 148 185 2508 1.09919649379 1.0 0.997774249199 99.9974822138 Annotation Cluster 29 Enrichment Score: 0.458739534731 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0042364~water-soluble vitamin biosynthetic process 7 3.5175879397 0.264234066118 947495,946946,948869,947916,946383,946453,945741 148 74 2508 1.60299488678 1.0 0.99495812569 98.6784131758 GOTERM_BP_FAT GO:0009110~vitamin biosynthetic process 7 3.5175879397 0.326843577684 947495,946946,948869,947916,946383,946453,945741 148 80 2508 1.48277027027 1.0 0.99721100303 99.6228440318 GOTERM_BP_FAT GO:0006767~water-soluble vitamin metabolic process 7 3.5175879397 0.380484434281 947495,946946,948869,947916,946383,946453,945741 148 85 2508 1.39554848967 1.0 0.997688168813 99.8830393562 GOTERM_BP_FAT GO:0006766~vitamin metabolic process 7 3.5175879397 0.445016591588 947495,946946,948869,947916,946383,946453,945741 148 91 2508 1.30353430353 1.0 0.997624113377 99.9751986591 Annotation Cluster 30 Enrichment Score: 0.435653989816 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0015399~primary active transmembrane transporter activity 7 3.5175879397 0.259834862447 949120,948537,945403,946323,945504,946889,945741 144 71 2354 1.61169796557 1.0 0.999287150691 98.1643689832 GOTERM_MF_FAT GO:0015405~P-P-bond-hydrolysis-driven transmembrane transporter activity 7 3.5175879397 0.259834862447 949120,948537,945403,946323,945504,946889,945741 144 71 2354 1.61169796557 1.0 0.999287150691 98.1643689832 GOTERM_MF_FAT GO:0042626~ATPase activity,coupled to transmembrane movement of substances 6 3.01507537688 0.360407460275 948537,945403,946323,945504,946889,945741 144 65 2354 1.50897435897 1.0 0.999234983 99.7363292154 GOTERM_MF_FAT GO:0043492~ATPase activity,coupled to movement of substances 6 3.01507537688 0.360407460275 948537,945403,946323,945504,946889,945741 144 65 2354 1.50897435897 1.0 0.999234983 99.7363292154 GOTERM_MF_FAT GO:0016820~hydrolase activity,acting on acid anhydrides,catalyzing transmembrane movement of substances 6 3.01507537688 0.397653256753 948537,945403,946323,945504,946889,945741 144 68 2354 1.44240196078 1.0 0.999341155558 99.8811913163 GOTERM_MF_FAT GO:0042623~ATPase activity,coupled 7 3.5175879397 0.425060032829 948537,945681,945403,946323,945504,946889,945741 144 86 2354 1.3305878553 1.0 0.999508019674 99.9360068517 GOTERM_MF_FAT GO:0016887~ATPase activity 9 4.52261306533 0.601845296468 2847725,944833,948537,945681,945403,946323,945504,946889,945741 144 137 2354 1.07390510949 1.0 0.999501608078 99.9995147811 Annotation Cluster 31 Enrichment Score: 0.407833887867 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009069~serine family amino acid metabolic process 4 2.01005025126 0.321109358526 947264,948126,947384,947239 148 34 2508 1.99364069952 1.0 0.997424161157 99.5749293367 GOTERM_BP_FAT GO:0009070~serine family amino acid biosynthetic process 3 1.50753768844 0.476079258987 947264,948126,947239 148 27 2508 1.88288288288 1.0 0.998221397642 99.9889900728 Annotation Cluster 32 Enrichment Score: 0.407797873341 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS magnesium 11 5.52763819095 0.295819248433 947692,946368,948157,946013,946574,946383,946549,948540,946979,948164,2847759 199 148 3598 1.34381366291 1.0 0.944239920311 98.8258007508 GOTERM_MF_FAT GO:0000287~magnesium ion binding 10 5.02512562814 0.51686583245 947692,946368,948157,946574,946383,946549,948540,946979,948164,2847759 144 144 2354 1.13522376543 1.0 0.999289487477 99.9936577003 Annotation Cluster 33 Enrichment Score: 0.389336870826 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009108~coenzyme biosynthetic process 7 3.5175879397 0.316230759819 945399,946946,948869,944881,946383,948540,947947 148 79 2508 1.5015395142 1.0 0.997684379324 99.529773727 GOTERM_BP_FAT GO:0051188~cofactor biosynthetic process 8 4.02010050251 0.526407595189 945399,946946,948869,944881,946383,948540,945741,947947 148 116 2508 1.16868592731 1.0 0.998193442755 99.9973492541 Annotation Cluster 34 Enrichment Score: 0.383827092538 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS manganese 5 2.51256281407 0.371579364665 948400,948139,945437,948164,944852 199 56 3598 1.61432160804 1.0 0.941595604687 99.7224881516 GOTERM_MF_FAT GO:0030145~manganese ion binding 5 2.51256281407 0.459509217057 948400,948139,945437,948164,944852 144 57 2354 1.4339668616 1.0 0.999394204998 99.9718427242 Annotation Cluster 35 Enrichment Score: 0.378931671363 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS periplasm 11 5.52763819095 0.317744526878 947741,945005,948538,947962,948713,946035,944945,948571,947331,946375,947947 199 151 3598 1.31711537822 1.0 0.946187786173 99.2135793329 GOTERM_CC_FAT GO:0042597~periplasmic space 11 5.52763819095 0.54961500223 947741,945005,948538,947962,948713,946035,944945,948571,947331,946375,947947 89 175 1544 1.09046548957 1.0 0.998702225314 99.9539189878 Annotation Cluster 36 Enrichment Score: 0.371592247123 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0000156~two-component response regulator activity 5 2.51256281407 0.347080101214 945855,949119,948631,948896,946467 144 49 2354 1.66808390023 1.0 0.99928777309 99.6532103429 GOTERM_BP_FAT GO:0000160~two-component signal transduction system (phosphorelay) 6 3.01507537688 0.520458122033 945855,945233,949119,948631,948896,946467 148 81 2508 1.25525525526 1.0 0.998226934529 99.9968390842 Annotation Cluster 37 Enrichment Score: 0.363703071269 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS aromatic amino acid biosynthesis 3 1.50753768844 0.302210117418 947927,945605,2847759 199 20 3598 2.71206030151 1.0 0.942273756593 98.9539213353 KEGG_PATHWAY ecc00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.378496261337 947927,945605,2847759 88 19 1269 2.2769138756 1.0 0.999994148846 99.9486345314 KEGG_PATHWAY ecx00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.40358727404 947927,945605,2847759 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY ecf00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.40358727404 947927,945605,2847759 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY ecw00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.40358727404 947927,945605,2847759 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY ecm00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.40358727404 947927,945605,2847759 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY ece00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.40358727404 947927,945605,2847759 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY eck00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY eum00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY eci00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecq00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY eco00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ect00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecz00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecj00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecd00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecg00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecr00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 KEGG_PATHWAY ecv00400:Phenylalanine,tyrosine and tryptophan biosynthesis 3 1.50753768844 0.42820144014 947927,945605,2847759 88 21 1269 2.06006493506 1.0 0.999997573801 99.9863796193 GOTERM_BP_FAT GO:0009073~aromatic amino acid family biosynthetic process 3 1.50753768844 0.476079258987 947927,945605,2847759 148 27 2508 1.88288288288 1.0 0.998221397642 99.9889900728 GOTERM_BP_FAT GO:0046417~chorismate metabolic process 3 1.50753768844 0.495490646414 947927,945605,2847759 148 28 2508 1.81563706564 1.0 0.998115276913 99.993534475 GOTERM_BP_FAT GO:0009072~aromatic amino acid family metabolic process 3 1.50753768844 0.495490646414 947927,945605,2847759 148 28 2508 1.81563706564 1.0 0.998115276913 99.993534475 GOTERM_BP_FAT GO:0043648~dicarboxylic acid metabolic process 3 1.50753768844 0.792946312644 947927,945605,2847759 148 49 2508 1.03750689465 1.0 0.999719084684 99.9999999772 Annotation Cluster 38 Enrichment Score: 0.362777847924 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS Endonuclease 4 2.01005025126 0.197517336633 947103,949076,944852,947294 199 28 3598 2.58291457286 1.0 0.916122836408 93.8491015418 SP_PIR_KEYWORDS nuclease 4 2.01005025126 0.409663015274 947103,949076,944852,947294 199 42 3598 1.72194304858 1.0 0.94860373758 99.8743359144 GOTERM_MF_FAT GO:0004519~endonuclease activity 4 2.01005025126 0.490731187013 947103,949076,944852,947294 144 43 2354 1.52067183463 1.0 0.999447154096 99.9872285086 GOTERM_MF_FAT GO:0004518~nuclease activity 5 2.51256281407 0.539512759314 947671,947103,949076,944852,947294 144 63 2354 1.29739858907 1.0 0.999275031851 99.9966486997 GOTERM_BP_FAT GO:0044265~cellular macromolecule catabolic process 3 1.50753768844 0.716528390833 949076,944852,947294 148 42 2508 1.21042471042 1.0 0.999214487771 99.9999980917 Annotation Cluster 39 Enrichment Score: 0.3550660639 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS electron transport 7 3.5175879397 0.355136904961 946792,948571,946038,948667,946134,945984,947239 199 88 3598 1.43821379625 1.0 0.951614939301 99.615024872 GOTERM_BP_FAT GO:0022900~electron transport chain 7 3.5175879397 0.54887325164 946792,948571,946038,948667,946134,945984,947239 148 101 2508 1.1744715012 1.0 0.997815592293 99.9986640757 Annotation Cluster 40 Enrichment Score: 0.35478577954 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0015294~solute:cation symporter activity 6 3.01507537688 0.397653256753 2847725,948548,946244,945339,945982,948591 144 68 2354 1.44240196078 1.0 0.999341155558 99.8811913163 GOTERM_MF_FAT GO:0015293~symporter activity 7 3.5175879397 0.436198208295 2847725,948548,946244,945339,948168,945982,948591 144 87 2354 1.31529374202 1.0 0.99925380942 99.9506545037 GOTERM_MF_FAT GO:0005402~cation:sugar symporter activity 5 2.51256281407 0.459509217057 2847725,948548,946244,945339,945982 144 57 2354 1.4339668616 1.0 0.999394204998 99.9718427242 GOTERM_MF_FAT GO:0005351~sugar:hydrogen symporter activity 5 2.51256281407 0.459509217057 2847725,948548,946244,945339,945982 144 57 2354 1.4339668616 1.0 0.999394204998 99.9718427242 GOTERM_MF_FAT GO:0015295~solute:hydrogen symporter activity 5 2.51256281407 0.459509217057 2847725,948548,946244,945339,945982 144 57 2354 1.4339668616 1.0 0.999394204998 99.9718427242 Annotation Cluster 41 Enrichment Score: 0.332714721236 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY eci00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.31962136462 947692,946574,946571,945687 88 29 1269 1.98902821317 1.0 0.999984495719 99.7829204844 KEGG_PATHWAY ece00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.339069784704 947692,946574,946571,945687 88 30 1269 1.92272727273 1.0 0.999987598448 99.863212205 KEGG_PATHWAY ecc00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.377850279518 947692,946574,946571,945687 88 32 1269 1.80255681818 1.0 0.999995519551 99.9477777138 KEGG_PATHWAY ecv00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.416187612436 947692,946574,946571,945687 88 34 1269 1.69652406417 1.0 0.9999970238 99.9810332695 KEGG_PATHWAY eum00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.435094453715 947692,946574,946571,945687 88 35 1269 1.64805194805 1.0 0.999997572523 99.9887717824 KEGG_PATHWAY eck00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.435094453715 947692,946574,946571,945687 88 35 1269 1.64805194805 1.0 0.999997572523 99.9887717824 KEGG_PATHWAY ect00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.435094453715 947692,946574,946571,945687 88 35 1269 1.64805194805 1.0 0.999997572523 99.9887717824 KEGG_PATHWAY ecr00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.435094453715 947692,946574,946571,945687 88 35 1269 1.64805194805 1.0 0.999997572523 99.9887717824 KEGG_PATHWAY ecz00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.453782149836 947692,946574,946571,945687 88 36 1269 1.60227272727 1.0 0.999998018072 99.9934286743 KEGG_PATHWAY ecq00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.453782149836 947692,946574,946571,945687 88 36 1269 1.60227272727 1.0 0.999998018072 99.9934286743 KEGG_PATHWAY ecd00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.472221104619 947692,946574,946571,945687 88 37 1269 1.55896805897 1.0 0.999998758979 99.9961967455 KEGG_PATHWAY ecg00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.490384672414 947692,946574,946571,945687 88 38 1269 1.51794258373 1.0 0.999998977341 99.9978225442 KEGG_PATHWAY eco00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.559848578248 947692,946574,946571,945687 88 42 1269 1.37337662338 1.0 0.999999830785 99.9997888938 KEGG_PATHWAY ecj00520:Amino sugar and nucleotide sugar metabolism 4 2.01005025126 0.559848578248 947692,946574,946571,945687 88 42 1269 1.37337662338 1.0 0.999999830785 99.9997888938 KEGG_PATHWAY ecf00520:Amino sugar and nucleotide sugar metabolism 3 1.50753768844 0.721255458617 947692,946574,946571 88 36 1269 1.20170454545 1.0 0.999999989457 99.9999998537 KEGG_PATHWAY ecm00520:Amino sugar and nucleotide sugar metabolism 3 1.50753768844 0.721255458617 947692,946574,946571 88 36 1269 1.20170454545 1.0 0.999999989457 99.9999998537 Annotation Cluster 42 Enrichment Score: 0.322320738718 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0007155~cell adhesion 3 1.50753768844 0.476079258987 948845,944841,946375 148 27 2508 1.88288288288 1.0 0.998221397642 99.9889900728 GOTERM_BP_FAT GO:0022610~biological adhesion 3 1.50753768844 0.476079258987 948845,944841,946375 148 27 2508 1.88288288288 1.0 0.998221397642 99.9889900728 Annotation Cluster 43 Enrichment Score: 0.322226147968 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006355~regulation of transcription,DNA-dependent 19 9.54773869347 0.355643939286 945681,946911,945868,945687,949119,948631,945472,945473,945177,945855,945233,945533,947210,947696,947083,945437,948435,946467,948896 148 277 2508 1.16235730315 1.0 0.997780605353 99.7964034759 GOTERM_BP_FAT GO:0051252~regulation of RNA metabolic process 19 9.54773869347 0.361671025771 945681,946911,945868,945687,949119,948631,945472,945473,945177,945855,945233,945533,947210,947696,947083,945437,948435,946467,948896 148 278 2508 1.15817616177 1.0 0.997157085684 99.8216696699 SP_PIR_KEYWORDS Transcription 18 9.04522613065 0.365384173588 945681,946911,949119,948631,945472,945473,945177,945855,945533,946000,947210,947696,947083,947043,945437,948435,946467,948896 199 279 3598 1.16647754904 1.0 0.942854720439 99.6857514957 GOTERM_BP_FAT GO:0045449~regulation of transcription 21 10.5527638191 0.40845688998 945681,946911,945868,945687,949119,948631,945472,945177,945473,945855,945233,945533,946000,947210,947696,947083,947043,945437,948435,946467,948896 148 319 2508 1.1155638397 1.0 0.997792251035 99.9390292368 SP_PIR_KEYWORDS transcription regulation 17 8.54271356784 0.470324013808 946911,949119,948631,945472,945473,945177,945855,945533,946000,947210,947696,947083,947043,945437,948435,946467,948896 199 279 3598 1.10167324076 1.0 0.954534038419 99.9681978972 SP_PIR_KEYWORDS dna-binding 19 9.54773869347 0.537879965929 945681,946911,945549,949119,948631,945472,945177,945473,949095,945855,945533,946000,947210,947696,947043,945437,948435,946467,948896 199 327 3598 1.05054323606 1.0 0.965654654656 99.9943567819 GOTERM_BP_FAT GO:0006350~transcription 18 9.04522613065 0.612842774803 945681,946911,949119,948631,945472,945473,945177,945855,945533,946000,947210,947696,947083,947043,945437,948435,946467,948896 148 302 2508 1.0100232683 1.0 0.998322436387 99.9998453262 GOTERM_MF_FAT GO:0003677~DNA binding 20 10.0502512563 0.888247789369 945681,946911,945549,949119,948631,945472,945177,945473,949095,945855,945533,946000,947210,947696,947043,945437,948435,946976,946467,948896 144 390 2354 0.838319088319 1.0 0.999996845574 100.0 Annotation Cluster 44 Enrichment Score: 0.305491316462 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0000097~sulfur amino acid biosynthetic process 3 1.50753768844 0.476079258987 948126,948435,947239 148 27 2508 1.88288288288 1.0 0.998221397642 99.9889900728 GOTERM_BP_FAT GO:0000096~sulfur amino acid metabolic process 3 1.50753768844 0.514443999307 948126,948435,947239 148 29 2508 1.75302889096 1.0 0.998261451856 99.9962318297 Annotation Cluster 45 Enrichment Score: 0.302386830615 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecm00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.40358727404 946035,946038,946724 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY ecw00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.40358727404 946035,946038,946724 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY ecx00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.40358727404 946035,946038,946724 88 20 1269 2.16306818182 1.0 0.999996264782 99.9733516138 KEGG_PATHWAY eci00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.452286046658 946035,946038,946724 88 22 1269 1.96642561983 1.0 0.999998398196 99.9931361133 KEGG_PATHWAY ecc00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.475797670021 946035,946038,946724 88 23 1269 1.88092885375 1.0 0.999998594024 99.9965870586 KEGG_PATHWAY ece00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.475797670021 946035,946038,946724 88 23 1269 1.88092885375 1.0 0.999998594024 99.9965870586 KEGG_PATHWAY ect00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.498701175006 946035,946038,946724 88 24 1269 1.80255681818 1.0 0.999999046546 99.998324458 KEGG_PATHWAY ecv00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.498701175006 946035,946038,946724 88 24 1269 1.80255681818 1.0 0.999999046546 99.998324458 KEGG_PATHWAY ecg00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.520968804788 946035,946038,946724 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ecz00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.542579354523 946035,946038,946724 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY eck00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.542579354523 946035,946038,946724 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecd00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.542579354523 946035,946038,946724 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecr00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.542579354523 946035,946038,946724 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY eum00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.563517421506 946035,946038,946724 88 27 1269 1.60227272727 1.0 0.999999809725 99.9998152383 KEGG_PATHWAY eco00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.583772725433 946035,946038,946724 88 28 1269 1.5450487013 1.0 0.999999896084 99.9999133067 KEGG_PATHWAY ecj00630:Glyoxylate and dicarboxylate metabolism 3 1.50753768844 0.583772725433 946035,946038,946724 88 28 1269 1.5450487013 1.0 0.999999896084 99.9999133067 Annotation Cluster 46 Enrichment Score: 0.298113196021 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0050660~FAD binding 4 2.01005025126 0.425919080552 946792,948667,947707,947594 144 39 2354 1.67663817664 1.0 0.999318001906 99.9372656868 SP_PIR_KEYWORDS FAD 5 2.51256281407 0.434967625099 946792,948667,947707,947594,947239 199 61 3598 1.48200016476 1.0 0.952837987526 99.9278740779 SP_PIR_KEYWORDS Flavoprotein 5 2.51256281407 0.688456306077 946792,948667,947707,947594,947239 199 84 3598 1.07621440536 1.0 0.98647118901 99.9999618495 Annotation Cluster 47 Enrichment Score: 0.292738905855 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006644~phospholipid metabolic process 4 2.01005025126 0.419061037401 947059,947962,945725,945526 148 40 2508 1.69459459459 1.0 0.997526341849 99.9527548304 GOTERM_BP_FAT GO:0019637~organophosphate metabolic process 4 2.01005025126 0.466449184645 947059,947962,945725,945526 148 43 2508 1.57636706474 1.0 0.9981574761 99.9857664156 GOTERM_BP_FAT GO:0008654~phospholipid biosynthetic process 3 1.50753768844 0.677176160066 947059,947962,945526 148 39 2508 1.30353430353 1.0 0.998738523731 99.9999880695 Annotation Cluster 48 Enrichment Score: 0.285065962056 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006732~coenzyme metabolic process 9 4.52261306533 0.479674316342 947407,945399,946946,948869,944881,946383,948540,947947,946724 148 128 2508 1.19151182432 1.0 0.998083329211 99.9900086929 GOTERM_BP_FAT GO:0051186~cofactor metabolic process 11 5.52763819095 0.560946717039 947407,945399,946946,948869,944881,947916,946383,948540,945741,947947,946724 148 172 2508 1.08375235701 1.0 0.998018799084 99.9990886804 Annotation Cluster 49 Enrichment Score: 0.268795190152 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR UP_SEQ_FEATURE domain:ABC transporter 5 2.51256281407 0.422606353542 944833,948537,946323,945504,946889 199 60 3597 1.50628140704 1.0 0.999999993044 99.9439057141 INTERPRO IPR017871:ABC transporter,conserved site 6 3.01507537688 0.428396852069 2847725,944833,948537,946323,945504,946889 192 76 3389 1.39350328947 1.0 1.0 99.9608611391 INTERPRO IPR003439:ABC transporter-like 6 3.01507537688 0.428396852069 2847725,944833,948537,946323,945504,946889 192 76 3389 1.39350328947 1.0 1.0 99.9608611391 SMART SM00382:AAA 6 3.01507537688 0.74812102578 2847725,944833,948537,946323,945504,946889 30 114 554 0.971929824561 1.0 0.999974347008 99.998206798 INTERPRO IPR003593:ATPase,AAA+ type,core 6 3.01507537688 0.780591152884 2847725,944833,948537,946323,945504,946889 192 114 3389 0.929002192982 1.0 1.0 99.9999999425 Annotation Cluster 50 Enrichment Score: 0.268634955114 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS zinc 9 4.52261306533 0.526378740336 945494,946969,947644,948400,946430,945687,948139,947331,946375 199 142 3598 1.14594097247 1.0 0.964275673584 99.9922940551 GOTERM_MF_FAT GO:0008270~zinc ion binding 10 5.02512562814 0.551355548406 945494,946969,946012,947644,948400,946430,945687,948139,947331,946375 144 148 2354 1.10454204204 1.0 0.999281804537 99.9976293451 Annotation Cluster 51 Enrichment Score: 0.243464896897 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0008653~lipopolysaccharide metabolic process 6 3.01507537688 0.439527867801 948136,947692,946574,944945,946565,945526 148 74 2508 1.37399561724 1.0 0.997726207487 99.9715070923 GOTERM_BP_FAT GO:0009103~lipopolysaccharide biosynthetic process 5 2.51256281407 0.629365986048 948136,947692,946574,946565,945526 148 73 2508 1.16068122917 1.0 0.998468623387 99.9999163737 SP_PIR_KEYWORDS lipopolysaccharide biosynthesis 4 2.01005025126 0.672536137287 948136,947692,946574,946565 199 62 3598 1.16647754904 1.0 0.985964383629 99.9999282545 Annotation Cluster 52 Enrichment Score: 0.24168407165 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS atp-binding 23 11.5577889447 0.443969695239 2847725,946933,946969,948537,945681,946946,944881,946891,949076,945549,946549,945498,946889,945741,947294,944833,946368,945233,946323,945504,945097,2847759,945526 199 382 3598 1.08861059223 1.0 0.949740753439 99.9411562009 SP_PIR_KEYWORDS nucleotide-binding 25 12.5628140704 0.459658433581 946933,945681,944881,946889,945741,944833,945233,945504,947331,2847759,945526,2847725,948537,946969,946946,946891,945549,949076,946549,945498,947294,946368,946323,948482,945097 199 421 3598 1.07365807661 1.0 0.953273968039 99.9590571989 GOTERM_MF_FAT GO:0000166~nucleotide binding 35 17.5879396985 0.486413533004 946933,945681,945645,946571,944881,945687,948667,946889,945741,947594,944833,945233,945403,945504,947331,2847759,945526,2847725,948537,946969,946946,946891,949076,945549,946549,946680,945498,947239,947294,946792,946368,946323,948482,947707,945097 144 550 2354 1.04027777778 1.0 0.999548463474 99.985712448 GOTERM_MF_FAT GO:0030554~adenyl nucleotide binding 28 14.0703517588 0.522792565575 946933,945681,944881,948667,946889,945741,947594,944833,945233,945403,945504,2847759,945526,2847725,948537,946969,946946,946891,949076,945549,946549,945498,947294,946792,946368,946323,947707,945097 144 442 2354 1.03557063851 1.0 0.999196697037 99.9946170323 GOTERM_MF_FAT GO:0001883~purine nucleoside binding 28 14.0703517588 0.522792565575 946933,945681,944881,948667,946889,945741,947594,944833,945233,945403,945504,2847759,945526,2847725,948537,946969,946946,946891,949076,945549,946549,945498,947294,946792,946368,946323,947707,945097 144 442 2354 1.03557063851 1.0 0.999196697037 99.9946170323 GOTERM_MF_FAT GO:0001882~nucleoside binding 28 14.0703517588 0.554661366903 946933,945681,944881,948667,946889,945741,947594,944833,945233,945403,945504,2847759,945526,2847725,948537,946969,946946,946891,949076,945549,946549,945498,947294,946792,946368,946323,947707,945097 144 448 2354 1.02170138889 1.0 0.998967552065 99.9978512206 GOTERM_MF_FAT GO:0017076~purine nucleotide binding 29 14.5728643216 0.607890433339 946933,945681,944881,948667,946889,945741,947594,944833,945233,945403,945504,2847759,945526,2847725,948537,946969,946946,946891,949076,945549,946549,945498,947294,946792,946368,946323,948482,947707,945097 144 475 2354 0.998040935673 1.0 0.99945554089 99.9996040373 GOTERM_MF_FAT GO:0005524~ATP binding 24 12.0603015075 0.663512242885 2847725,946933,946969,948537,945681,946946,944881,946891,949076,945549,946549,945498,946889,945741,947294,944833,946368,945233,945403,946323,945504,945097,2847759,945526 144 402 2354 0.975953565506 1.0 0.999747374727 99.9999481321 GOTERM_MF_FAT GO:0032559~adenyl ribonucleotide binding 24 12.0603015075 0.663512242885 2847725,946933,946969,948537,945681,946946,944881,946891,949076,945549,946549,945498,946889,945741,947294,944833,946368,945233,945403,946323,945504,945097,2847759,945526 144 402 2354 0.975953565506 1.0 0.999747374727 99.9999481321 GOTERM_MF_FAT GO:0032555~purine ribonucleotide binding 25 12.5628140704 0.738304549453 946933,945681,944881,946889,945741,944833,945233,945403,945504,2847759,945526,2847725,948537,946969,946946,946891,945549,949076,946549,945498,947294,946368,946323,948482,945097 144 435 2354 0.939495530013 1.0 0.999901398576 99.9999981621 GOTERM_MF_FAT GO:0032553~ribonucleotide binding 25 12.5628140704 0.738304549453 946933,945681,944881,946889,945741,944833,945233,945403,945504,2847759,945526,2847725,948537,946969,946946,946891,945549,949076,946549,945498,947294,946368,946323,948482,945097 144 435 2354 0.939495530013 1.0 0.999901398576 99.9999981621 Annotation Cluster 53 Enrichment Score: 0.240033142026 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006733~oxidoreduction coenzyme metabolic process 4 2.01005025126 0.466449184645 947407,946946,948869,948540 148 43 2508 1.57636706474 1.0 0.9981574761 99.9857664156 GOTERM_BP_FAT GO:0043603~cellular amide metabolic process 4 2.01005025126 0.541363653544 947407,946946,948869,947916 148 48 2508 1.41216216216 1.0 0.998013827998 99.9983139371 GOTERM_BP_FAT GO:0006769~nicotinamide metabolic process 3 1.50753768844 0.585456483975 947407,946946,948869 148 33 2508 1.54054054054 1.0 0.99801430054 99.9995945578 GOTERM_BP_FAT GO:0009820~alkaloid metabolic process 3 1.50753768844 0.585456483975 947407,946946,948869 148 33 2508 1.54054054054 1.0 0.99801430054 99.9995945578 GOTERM_BP_FAT GO:0019362~pyridine nucleotide metabolic process 3 1.50753768844 0.585456483975 947407,946946,948869 148 33 2508 1.54054054054 1.0 0.99801430054 99.9995945578 GOTERM_BP_FAT GO:0046496~nicotinamide nucleotide metabolic process 3 1.50753768844 0.585456483975 947407,946946,948869 148 33 2508 1.54054054054 1.0 0.99801430054 99.9995945578 GOTERM_BP_FAT GO:0019748~secondary metabolic process 3 1.50753768844 0.703875894527 947407,946946,948869 148 41 2508 1.23994726434 1.0 0.999164989811 99.9999964678 Annotation Cluster 54 Enrichment Score: 0.223798560557 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS trna processing 4 2.01005025126 0.333282434524 948610,947707,947687,947384 199 37 3598 1.95463805514 1.0 0.944522246404 99.4126965424 GOTERM_BP_FAT GO:0008033~tRNA processing 4 2.01005025126 0.435023970432 948610,947707,947687,947384 148 41 2508 1.65326301912 1.0 0.997871255741 99.968103236 GOTERM_BP_FAT GO:0006399~tRNA metabolic process 5 2.51256281407 0.583976870701 946969,948610,947707,947687,947384 148 69 2508 1.22796709753 1.0 0.998163487569 99.9995736701 GOTERM_BP_FAT GO:0034470~ncRNA processing 4 2.01005025126 0.772549794174 948610,947707,947687,947384 148 68 2508 0.996820349762 1.0 0.999621557307 99.9999999144 GOTERM_BP_FAT GO:0034660~ncRNA metabolic process 5 2.51256281407 0.826036385056 946969,948610,947707,947687,947384 148 96 2508 0.882601351351 1.0 0.99982733132 99.999999998 GOTERM_BP_FAT GO:0006396~RNA processing 4 2.01005025126 0.840546450735 948610,947707,947687,947384 148 77 2508 0.880308880309 1.0 0.9998481189 99.9999999994 Annotation Cluster 55 Enrichment Score: 0.21967289663 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ece02060:Phosphotransferase system (PTS) 3 1.50753768844 0.583772725433 947648,947649,947397 88 28 1269 1.5450487013 1.0 0.999999896084 99.9999133067 KEGG_PATHWAY ecv02060:Phosphotransferase system (PTS) 3 1.50753768844 0.603339492901 947648,947649,947397 88 29 1269 1.49177115987 1.0 0.99999994273 99.9999597305 KEGG_PATHWAY eci02060:Phosphotransferase system (PTS) 3 1.50753768844 0.603339492901 947648,947649,947397 88 29 1269 1.49177115987 1.0 0.99999994273 99.9999597305 KEGG_PATHWAY ecc02060:Phosphotransferase system (PTS) 3 1.50753768844 0.622215900629 947648,947649,947397 88 30 1269 1.44204545455 1.0 0.999999968149 99.9999814746 Annotation Cluster 56 Enrichment Score: 0.203548913271 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecp00240:Pyrimidine metabolism 3 1.50753768844 0.498701175006 948157,947331,946979 88 24 1269 1.80255681818 1.0 0.999999046546 99.998324458 KEGG_PATHWAY ecy00240:Pyrimidine metabolism 3 1.50753768844 0.498701175006 948157,947331,946979 88 24 1269 1.80255681818 1.0 0.999999046546 99.998324458 KEGG_PATHWAY ecs00240:Pyrimidine metabolism 3 1.50753768844 0.498701175006 948157,947331,946979 88 24 1269 1.80255681818 1.0 0.999999046546 99.998324458 KEGG_PATHWAY ecl00240:Pyrimidine metabolism 3 1.50753768844 0.498701175006 948157,947331,946979 88 24 1269 1.80255681818 1.0 0.999999046546 99.998324458 KEGG_PATHWAY ecv00240:Pyrimidine metabolism 4 2.01005025126 0.623456222458 948157,948987,947331,946979 88 46 1269 1.25395256917 1.0 0.999999960087 99.9999824198 KEGG_PATHWAY ecc00240:Pyrimidine metabolism 4 2.01005025126 0.63836633667 948157,948987,947331,946979 88 47 1269 1.22727272727 1.0 0.999999965354 99.9999907615 KEGG_PATHWAY ecd00240:Pyrimidine metabolism 4 2.01005025126 0.63836633667 948157,948987,947331,946979 88 47 1269 1.22727272727 1.0 0.999999965354 99.9999907615 KEGG_PATHWAY ece00240:Pyrimidine metabolism 4 2.01005025126 0.63836633667 948157,948987,947331,946979 88 47 1269 1.22727272727 1.0 0.999999965354 99.9999907615 KEGG_PATHWAY eck00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecx00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY eum00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecr00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY eci00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecf00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecq00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecz00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY eco00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecw00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecj00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecg00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ecm00240:Pyrimidine metabolism 4 2.01005025126 0.652868652886 948157,948987,947331,946979 88 48 1269 1.20170454545 1.0 0.999999949561 99.9999951856 KEGG_PATHWAY ect00240:Pyrimidine metabolism 3 1.50753768844 0.846858459207 948157,948987,946979 88 47 1269 0.920454545455 1.0 0.999999999892 100.0 Annotation Cluster 57 Enrichment Score: 0.185780349016 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ece00051:Fructose and mannose metabolism 3 1.50753768844 0.542579354523 948400,946574,948937 88 26 1269 1.6638986014 1.0 0.999999731679 99.9996103637 KEGG_PATHWAY ecf00051:Fructose and mannose metabolism 3 1.50753768844 0.603339492901 948400,946574,948937 88 29 1269 1.49177115987 1.0 0.99999994273 99.9999597305 KEGG_PATHWAY ecv00051:Fructose and mannose metabolism 3 1.50753768844 0.622215900629 948400,946574,948937 88 30 1269 1.44204545455 1.0 0.999999968149 99.9999814746 KEGG_PATHWAY ecc00051:Fructose and mannose metabolism 3 1.50753768844 0.622215900629 948400,946574,948937 88 30 1269 1.44204545455 1.0 0.999999968149 99.9999814746 KEGG_PATHWAY eci00051:Fructose and mannose metabolism 3 1.50753768844 0.640403572432 948400,946574,948937 88 31 1269 1.39552785924 1.0 0.999999946415 99.9999915563 KEGG_PATHWAY ecm00051:Fructose and mannose metabolism 3 1.50753768844 0.640403572432 948400,946574,948937 88 31 1269 1.39552785924 1.0 0.999999946415 99.9999915563 KEGG_PATHWAY eck00051:Fructose and mannose metabolism 3 1.50753768844 0.657907125293 948400,946574,948937 88 32 1269 1.35191761364 1.0 0.999999948628 99.9999961856 KEGG_PATHWAY ecr00051:Fructose and mannose metabolism 3 1.50753768844 0.657907125293 948400,946574,948937 88 32 1269 1.35191761364 1.0 0.999999948628 99.9999961856 KEGG_PATHWAY ecd00051:Fructose and mannose metabolism 3 1.50753768844 0.657907125293 948400,946574,948937 88 32 1269 1.35191761364 1.0 0.999999948628 99.9999961856 KEGG_PATHWAY eum00051:Fructose and mannose metabolism 3 1.50753768844 0.674733760301 948400,946574,948937 88 33 1269 1.31095041322 1.0 0.999999961449 99.9999982916 KEGG_PATHWAY ect00051:Fructose and mannose metabolism 3 1.50753768844 0.674733760301 948400,946574,948937 88 33 1269 1.31095041322 1.0 0.999999961449 99.9999982916 KEGG_PATHWAY ecq00051:Fructose and mannose metabolism 3 1.50753768844 0.674733760301 948400,946574,948937 88 33 1269 1.31095041322 1.0 0.999999961449 99.9999982916 KEGG_PATHWAY ecz00051:Fructose and mannose metabolism 3 1.50753768844 0.690892894543 948400,946574,948937 88 34 1269 1.27239304813 1.0 0.999999977154 99.9999992411 KEGG_PATHWAY eco00051:Fructose and mannose metabolism 3 1.50753768844 0.721255458617 948400,946574,948937 88 36 1269 1.20170454545 1.0 0.999999989457 99.9999998537 KEGG_PATHWAY ecj00051:Fructose and mannose metabolism 3 1.50753768844 0.721255458617 948400,946574,948937 88 36 1269 1.20170454545 1.0 0.999999989457 99.9999998537 Annotation Cluster 58 Enrichment Score: 0.184484163317 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0015980~energy derivation by oxidation of organic compounds 12 6.03015075377 0.580186724971 946792,947962,946035,947438,947940,948571,946038,948667,948540,947932,945984,946724 148 192 2508 1.05912162162 1.0 0.998419052741 99.999515516 GOTERM_BP_FAT GO:0006091~generation of precursor metabolites and energy 15 7.53768844221 0.73699388716 947438,948667,948540,946134,947239,946724,946792,947644,947962,946035,947940,948571,946038,947932,945984 148 271 2508 0.937967487783 1.0 0.999433349468 99.9999993366 Annotation Cluster 59 Enrichment Score: 0.175835444257 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0034654~nucleobase,nucleoside,nucleotide and nucleic acid biosynthetic process 6 3.01507537688 0.664843455875 946368,948157,946946,948869,945097,946979 148 95 2508 1.07027027027 1.0 0.998806335468 99.9999797592 GOTERM_BP_FAT GO:0034404~nucleobase,nucleoside and nucleotide biosynthetic process 6 3.01507537688 0.664843455875 946368,948157,946946,948869,945097,946979 148 95 2508 1.07027027027 1.0 0.998806335468 99.9999797592 GOTERM_BP_FAT GO:0009165~nucleotide biosynthetic process 5 2.51256281407 0.671513689471 946368,948157,946946,948869,945097 148 77 2508 1.10038610039 1.0 0.998838402757 99.9999847548 Annotation Cluster 60 Enrichment Score: 0.173396619967 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006281~DNA repair 5 2.51256281407 0.629365986048 947671,945681,946383,948164,947294 148 73 2508 1.16068122917 1.0 0.998468623387 99.9999163737 GOTERM_BP_FAT GO:0006974~response to DNA damage stimulus 5 2.51256281407 0.629365986048 947671,945681,946383,948164,947294 148 73 2508 1.16068122917 1.0 0.998468623387 99.9999163737 GOTERM_BP_FAT GO:0033554~cellular response to stress 5 2.51256281407 0.762085334851 947671,945681,946383,948164,947294 148 87 2508 0.973904939422 1.0 0.999603773444 99.9999998386 Annotation Cluster 61 Enrichment Score: 0.163814574664 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006461~protein complex assembly 3 1.50753768844 0.64856720547 947210,948571,946038 148 37 2508 1.37399561724 1.0 0.998801941599 99.9999604995 GOTERM_BP_FAT GO:0070271~protein complex biogenesis 3 1.50753768844 0.64856720547 947210,948571,946038 148 37 2508 1.37399561724 1.0 0.998801941599 99.9999604995 GOTERM_BP_FAT GO:0065003~macromolecular complex assembly 3 1.50753768844 0.663113618959 947210,948571,946038 148 38 2508 1.33783783784 1.0 0.998881892379 99.9999782354 GOTERM_BP_FAT GO:0043933~macromolecular complex subunit organization 3 1.50753768844 0.792946312644 947210,948571,946038 148 49 2508 1.03750689465 1.0 0.999719084684 99.9999999772 Annotation Cluster 62 Enrichment Score: 0.160425378768 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0050662~coenzyme binding 9 4.52261306533 0.512525280974 946792,945645,946571,945687,948667,946680,947707,947594,947239 144 127 2354 1.15846456693 1.0 0.999542983677 99.9928573794 GOTERM_MF_FAT GO:0048037~cofactor binding 9 4.52261306533 0.932038709909 946792,945645,946571,945687,948667,946680,947707,947594,947239 144 200 2354 0.735625 1.0 0.999999676355 100.0 Annotation Cluster 63 Enrichment Score: 0.14991960401 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0043169~cation binding 36 18.0904522613 0.676160733616 946574,946383,945687,946979,948164,948540,947594,946724,947780,947644,946035,946430,947940,948571,946038,947331,946375,944852,2847759,945494,947927,947461,945021,946969,946115,946549,947239,947692,946368,946012,948157,948400,948139,945437,945984,949131 144 607 2354 0.969522240527 1.0 0.999764811496 99.9999688249 GOTERM_MF_FAT GO:0043167~ion binding 36 18.0904522613 0.684666995163 946574,946383,945687,946979,948164,948540,947594,946724,947780,947644,946035,946430,947940,948571,946038,947331,946375,944852,2847759,945494,947927,947461,945021,946969,946115,946549,947239,947692,946368,946012,948157,948400,948139,945437,945984,949131 144 609 2354 0.966338259442 1.0 0.999760883731 99.9999781118 GOTERM_MF_FAT GO:0046872~metal ion binding 34 17.0854271357 0.766852518964 946574,946383,945687,946979,948164,948540,947594,946724,947780,947644,946035,946430,948571,946038,947331,946375,944852,2847759,945494,947927,947461,945021,946969,946115,946549,947239,947692,946368,946012,948157,948400,948139,945437,945984 144 596 2354 0.932559656972 1.0 0.999929776311 99.9999996039 Annotation Cluster 64 Enrichment Score: 0.142935468012 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecv02010:ABC transporters 10 5.02512562814 0.629352256399 944833,948538,948537,947962,945403,946323,945504,946375,946889,948594 88 139 1269 1.03744277305 1.0 0.99999995993 99.9999863266 KEGG_PATHWAY ecc02010:ABC transporters 10 5.02512562814 0.638391774082 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889 88 140 1269 1.03003246753 1.0 0.99999995474 99.9999907718 KEGG_PATHWAY ecq02010:ABC transporters 10 5.02512562814 0.647316772283 944833,948538,948537,947962,945403,946323,945673,946375,946889,948594 88 141 1269 1.02272727273 1.0 0.9999999495 99.9999938016 KEGG_PATHWAY ecd02010:ABC transporters 11 5.52763819095 0.670232458171 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889,948594 88 159 1269 0.997641509434 1.0 0.999999962793 99.9999978736 KEGG_PATHWAY ecr02010:ABC transporters 10 5.02512562814 0.70636616644 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889 88 148 1269 0.974355036855 1.0 0.999999986343 99.999999665 KEGG_PATHWAY ecg02010:ABC transporters 10 5.02512562814 0.70636616644 944833,948538,948537,947962,945403,946323,945673,946375,946889,948594 88 148 1269 0.974355036855 1.0 0.999999986343 99.999999665 KEGG_PATHWAY ect02010:ABC transporters 10 5.02512562814 0.714287156974 944833,948538,948537,947962,945403,946323,945673,946375,946889,948594 88 149 1269 0.967815741306 1.0 0.999999988251 99.9999997833 KEGG_PATHWAY eum02010:ABC transporters 10 5.02512562814 0.73724455315 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889 88 152 1269 0.948714114833 1.0 0.999999992523 99.9999999429 KEGG_PATHWAY eck02010:ABC transporters 10 5.02512562814 0.744625223694 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889 88 153 1269 0.942513368984 1.0 0.999999993569 99.9999999637 KEGG_PATHWAY eco02010:ABC transporters 11 5.52763819095 0.746290589407 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889,948594 88 169 1269 0.938609467456 1.0 0.999999992509 99.9999999673 KEGG_PATHWAY ecj02010:ABC transporters 11 5.52763819095 0.746290589407 944833,948538,948537,947962,945403,946323,945504,945673,946375,946889,948594 88 169 1269 0.938609467456 1.0 0.999999992509 99.9999999673 KEGG_PATHWAY ece02010:ABC transporters 9 4.52261306533 0.751209992723 944833,948538,948537,947962,945403,946323,945504,946375,946889 88 138 1269 0.940464426877 1.0 0.999999992708 99.9999999761 KEGG_PATHWAY eci02010:ABC transporters 9 4.52261306533 0.77307540782 944833,948538,948537,947962,945403,946323,945504,946375,946889 88 141 1269 0.920454545455 1.0 0.999999997288 99.9999999945 KEGG_PATHWAY ecz02010:ABC transporters 9 4.52261306533 0.780057561344 944833,948538,948537,947962,945403,946323,945673,946375,946889 88 142 1269 0.913972471191 1.0 0.999999997075 99.9999999966 KEGG_PATHWAY ecf02010:ABC transporters 8 4.02010050251 0.83413598188 948538,948537,947962,946323,945504,945673,946375,946889 88 134 1269 0.86092265943 1.0 0.999999999829 100.0 Annotation Cluster 65 Enrichment Score: 0.141539481896 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS dna repair 4 2.01005025126 0.639092393107 945681,949076,948164,947294 199 59 3598 1.22578996678 1.0 0.983673912982 99.9997539645 SP_PIR_KEYWORDS DNA damage 3 1.50753768844 0.815374993153 945681,948164,947294 199 55 3598 0.986203746003 1.0 0.996781029331 99.9999999497 Annotation Cluster 66 Enrichment Score: 0.139246053996 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0006006~glucose metabolic process 5 2.51256281407 0.710288481975 947407,947692,947644,947940,947932 148 81 2508 1.04604604605 1.0 0.999190724156 99.9999974059 GOTERM_BP_FAT GO:0019318~hexose metabolic process 6 3.01507537688 0.741435062164 947407,947692,947644,948400,947940,947932 148 104 2508 0.977650727651 1.0 0.999432363042 99.9999994782 Annotation Cluster 67 Enrichment Score: 0.138457757508 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS oxidoreductase 20 10.0502512563 0.659699257629 945021,945789,945645,946571,947438,946680,948667,948937,947594,947239,946792,947495,946012,946035,948571,946038,947707,948139,945984,946913 199 369 3598 0.979967588621 1.0 0.984915841463 99.9998832053 GOTERM_BP_FAT GO:0055114~oxidation reduction 21 10.5527638191 0.801195478333 945021,945789,945645,946571,947438,946680,948667,948937,946134,947594,947239,946792,947495,946012,946035,948571,946038,947707,948139,945984,946913 148 395 2508 0.900923708519 1.0 0.99969522913 99.9999999872 Annotation Cluster 68 Enrichment Score: 0.1342125776 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0009061~anaerobic respiration 8 4.02010050251 0.674231591063 946792,947962,946035,948571,946038,948667,945984,946724 148 133 2508 1.01930501931 1.0 0.998785999254 99.99998644 GOTERM_BP_FAT GO:0045333~cellular respiration 9 4.52261306533 0.799402951331 946792,947962,946035,948571,946038,948667,948540,945984,946724 148 171 2508 0.891891891892 1.0 0.999710015346 99.9999999854 Annotation Cluster 69 Enrichment Score: 0.115480082362 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0005275~amine transmembrane transporter activity 3 1.50753768844 0.622121560809 946323,948656,945422 144 34 2354 1.44240196078 1.0 0.999500221794 99.9997577136 GOTERM_BP_FAT GO:0015837~amine transport 3 1.50753768844 0.944418710031 946323,948656,945422 148 76 2508 0.668918918919 1.0 0.999997681258 100.0 Annotation Cluster 70 Enrichment Score: 0.0976737556058 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR UP_SEQ_FEATURE disulfide bond 4 2.01005025126 0.791365981348 948845,948548,944841,947331 199 75 3597 0.964020100503 1.0 1.0 99.9999999471 SP_PIR_KEYWORDS disulfide bond 4 2.01005025126 0.805888784163 948845,948548,944841,947331 199 77 3598 0.93924166286 1.0 0.996820626472 99.999999905 Annotation Cluster 71 Enrichment Score: 0.0941021818775 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0009289~pilus 3 1.50753768844 0.727653481903 948845,947741,944841 89 44 1544 1.18283963228 1.0 0.999907709732 99.9996374045 GOTERM_CC_FAT GO:0042995~cell projection 4 2.01005025126 0.890986296162 948845,947741,946446,944841 89 88 1544 0.788559754852 1.0 0.999801388581 99.9999999463 Annotation Cluster 72 Enrichment Score: 0.0914046805428 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS cell cycle 3 1.50753768844 0.771298433881 947404,945549,945741 199 50 3598 1.0848241206 1.0 0.994815264635 99.9999992411 SP_PIR_KEYWORDS cell division 3 1.50753768844 0.807213455116 947404,945549,945741 199 54 3598 1.00446677834 1.0 0.996593082776 99.9999999129 GOTERM_BP_FAT GO:0051301~cell division 3 1.50753768844 0.827990920719 947404,945549,945741 148 53 2508 0.959204487506 1.0 0.999819723507 99.9999999983 GOTERM_BP_FAT GO:0007049~cell cycle 3 1.50753768844 0.835881784769 947404,945549,945741 148 54 2508 0.941441441441 1.0 0.999841786911 99.9999999991 Annotation Cluster 73 Enrichment Score: 0.0739968204229 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0009279~cell outer membrane 5 2.51256281407 0.79166742603 945494,944967,948548,946608,4056027 89 93 1544 0.932705086384 1.0 0.999835820978 99.9999725422 GOTERM_CC_FAT GO:0019867~outer membrane 5 2.51256281407 0.812240614202 945494,944967,948548,946608,4056027 89 96 1544 0.903558052434 1.0 0.999766649745 99.9999899132 GOTERM_CC_FAT GO:0044462~external encapsulating structure part 6 3.01507537688 0.883810214762 945494,947741,944967,948548,946608,4056027 89 131 1544 0.794579294965 1.0 0.999943666932 99.9999999009 GOTERM_CC_FAT GO:0030313~cell envelope 8 4.02010050251 0.890074223833 945494,947741,949120,944967,948548,946608,945673,4056027 89 175 1544 0.793065810594 1.0 0.999898939505 99.9999999419 Annotation Cluster 74 Enrichment Score: 0.0708241425786 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecs00230:Purine metabolism 3 1.50753768844 0.520968804788 946368,945097,947331 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ecp00230:Purine metabolism 3 1.50753768844 0.520968804788 946368,945097,947331 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ecy00230:Purine metabolism 3 1.50753768844 0.520968804788 946368,945097,947331 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ecl00230:Purine metabolism 3 1.50753768844 0.520968804788 946368,945097,947331 88 25 1269 1.73045454545 1.0 0.999999496519 99.9991873255 KEGG_PATHWAY ece00230:Purine metabolism 3 1.50753768844 0.940258896717 946368,945097,947331 88 63 1269 0.686688311688 1.0 1.0 100.0 KEGG_PATHWAY eci00230:Purine metabolism 3 1.50753768844 0.943796217547 946368,945097,947331 88 64 1269 0.675958806818 1.0 1.0 100.0 KEGG_PATHWAY ecv00230:Purine metabolism 3 1.50753768844 0.950288899227 946368,945097,947331 88 66 1269 0.655475206612 1.0 1.0 100.0 KEGG_PATHWAY ecq00230:Purine metabolism 3 1.50753768844 0.958717244669 946368,945097,947331 88 69 1269 0.626976284585 1.0 1.0 100.0 KEGG_PATHWAY ecf00230:Purine metabolism 3 1.50753768844 0.958717244669 946368,945097,947331 88 69 1269 0.626976284585 1.0 1.0 100.0 KEGG_PATHWAY ecz00230:Purine metabolism 3 1.50753768844 0.958717244669 946368,945097,947331 88 69 1269 0.626976284585 1.0 1.0 100.0 KEGG_PATHWAY ecw00230:Purine metabolism 3 1.50753768844 0.958717244669 946368,945097,947331 88 69 1269 0.626976284585 1.0 1.0 100.0 KEGG_PATHWAY ecx00230:Purine metabolism 3 1.50753768844 0.961212742854 946368,945097,947331 88 70 1269 0.618019480519 1.0 1.0 100.0 KEGG_PATHWAY eum00230:Purine metabolism 3 1.50753768844 0.961212742854 946368,945097,947331 88 70 1269 0.618019480519 1.0 1.0 100.0 KEGG_PATHWAY ecd00230:Purine metabolism 3 1.50753768844 0.961212742854 946368,945097,947331 88 70 1269 0.618019480519 1.0 1.0 100.0 KEGG_PATHWAY ecg00230:Purine metabolism 3 1.50753768844 0.963564931858 946368,945097,947331 88 71 1269 0.609314980794 1.0 1.0 100.0 KEGG_PATHWAY ecm00230:Purine metabolism 3 1.50753768844 0.963564931858 946368,945097,947331 88 71 1269 0.609314980794 1.0 1.0 100.0 KEGG_PATHWAY ecr00230:Purine metabolism 3 1.50753768844 0.965781447857 946368,945097,947331 88 72 1269 0.600852272727 1.0 1.0 100.0 KEGG_PATHWAY eck00230:Purine metabolism 3 1.50753768844 0.967869568828 946368,945097,947331 88 73 1269 0.592621419676 1.0 1.0 100.0 KEGG_PATHWAY eco00230:Purine metabolism 3 1.50753768844 0.973431231292 946368,945097,947331 88 76 1269 0.5692284689 1.0 1.0 100.0 KEGG_PATHWAY ecj00230:Purine metabolism 3 1.50753768844 0.973431231292 946368,945097,947331 88 76 1269 0.5692284689 1.0 1.0 100.0 Annotation Cluster 75 Enrichment Score: 0.0692150159227 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecp02010:ABC transporters 3 1.50753768844 0.837986453993 948538,946323,946375 88 46 1269 0.940464426877 1.0 0.999999999834 100.0 KEGG_PATHWAY ecs02010:ABC transporters 3 1.50753768844 0.846858459207 948538,946323,946375 88 47 1269 0.920454545455 1.0 0.999999999892 100.0 KEGG_PATHWAY ecy02010:ABC transporters 3 1.50753768844 0.855292798612 948538,946323,946375 88 48 1269 0.901278409091 1.0 0.999999999847 100.0 KEGG_PATHWAY ecl02010:ABC transporters 3 1.50753768844 0.870918052133 948538,946323,946375 88 50 1269 0.865227272727 1.0 0.999999999914 100.0 Annotation Cluster 76 Enrichment Score: 0.06847278093 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_MF_FAT GO:0005506~iron ion binding 11 5.52763819095 0.83371575057 945021,947461,947780,946035,948571,946038,945437,945984,947594,946724,947239 144 209 2354 0.860380116959 1.0 0.999983816843 99.9999999956 SP_PIR_KEYWORDS iron 9 4.52261306533 0.875057178486 945021,947461,947780,946035,948571,946038,945984,947594,946724 199 201 3598 0.809570239256 1.0 0.998697226375 99.9999999996 Annotation Cluster 77 Enrichment Score: 0.0673561658066 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR UP_SEQ_FEATURE metal ion-binding site:Iron-sulfur (4Fe-4S) 3 1.50753768844 0.515843924433 946035,947594,946724 199 31 3597 1.74923002107 1.0 0.999999994839 99.9949134445 SP_PIR_KEYWORDS 4fe-4s 4 2.01005025126 0.890565708911 946035,945984,947594,946724 199 92 3598 0.78610443522 1.0 0.999053415649 99.9999999999 GOTERM_MF_FAT GO:0051539~4 iron,4 sulfur cluster binding 4 2.01005025126 0.927315789461 946035,945984,947594,946724 144 92 2354 0.710748792271 1.0 0.999999646686 100.0 SP_PIR_KEYWORDS iron-sulfur 4 2.01005025126 0.95776799353 946035,945984,947594,946724 199 115 3598 0.628883548176 1.0 0.999893951527 100.0 GOTERM_MF_FAT GO:0051536~iron-sulfur cluster binding 4 2.01005025126 0.98309473704 946035,945984,947594,946724 144 122 2354 0.535974499089 1.0 0.999999999782 100.0 GOTERM_MF_FAT GO:0051540~metal cluster binding 4 2.01005025126 0.98309473704 946035,945984,947594,946724 144 122 2354 0.535974499089 1.0 0.999999999782 100.0 Annotation Cluster 78 Enrichment Score: 0.0669148024781 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecw02020:Two-component system 7 3.5175879397 0.727128177688 945233,946035,946608,946038,948667,948631,946467 88 103 1269 0.980030891439 1.0 0.999999990043 99.9999998958 KEGG_PATHWAY ecx02020:Two-component system 7 3.5175879397 0.777341599734 945233,946035,946608,946038,948667,948631,946467 88 109 1269 0.926084236864 1.0 0.999999997304 99.9999999959 KEGG_PATHWAY ecm02020:Two-component system 7 3.5175879397 0.785014678244 945233,946035,946608,946038,948667,948631,946467 88 110 1269 0.917665289256 1.0 0.999999997233 99.9999999977 KEGG_PATHWAY ecv02020:Two-component system 6 3.01507537688 0.820540756415 945233,946035,946038,948667,948631,946467 88 98 1269 0.882884972171 1.0 0.999999999645 99.9999999999 KEGG_PATHWAY eci02020:Two-component system 6 3.01507537688 0.847107671127 945233,946035,946038,948667,948631,946467 88 102 1269 0.848262032086 1.0 0.999999999862 100.0 KEGG_PATHWAY ecj02020:Two-component system 7 3.5175879397 0.851241458834 945233,946035,946608,946038,948667,948631,946467 88 120 1269 0.841193181818 1.0 0.999999999835 100.0 KEGG_PATHWAY eco02020:Two-component system 7 3.5175879397 0.856862603293 945233,946035,946608,946038,948667,948631,946467 88 121 1269 0.834241172051 1.0 0.999999999828 100.0 KEGG_PATHWAY eck02020:Two-component system 6 3.01507537688 0.870405922639 946035,946608,946038,948667,948631,946467 88 106 1269 0.816252144082 1.0 0.99999999993 100.0 KEGG_PATHWAY ecf02020:Two-component system 6 3.01507537688 0.875749270687 945233,946608,946038,948667,948631,946467 88 107 1269 0.808623619371 1.0 0.999999999928 100.0 KEGG_PATHWAY ecz02020:Two-component system 6 3.01507537688 0.880908414616 946035,946608,946038,948667,948631,946467 88 108 1269 0.801136363636 1.0 0.999999999943 100.0 KEGG_PATHWAY ect02020:Two-component system 6 3.01507537688 0.885887588409 946035,946608,946038,948667,948631,946467 88 109 1269 0.793786488741 1.0 0.999999999954 100.0 KEGG_PATHWAY ecq02020:Two-component system 6 3.01507537688 0.885887588409 946035,946608,946038,948667,948631,946467 88 109 1269 0.793786488741 1.0 0.999999999954 100.0 KEGG_PATHWAY ecr02020:Two-component system 6 3.01507537688 0.885887588409 946035,946608,946038,948667,948631,946467 88 109 1269 0.793786488741 1.0 0.999999999954 100.0 KEGG_PATHWAY ecd02020:Two-component system 6 3.01507537688 0.890691060321 946035,946608,946038,948667,948631,946467 88 110 1269 0.786570247934 1.0 0.999999999963 100.0 KEGG_PATHWAY eum02020:Two-component system 6 3.01507537688 0.895323122098 946035,946608,946038,948667,948631,946467 88 111 1269 0.779484029484 1.0 0.999999999971 100.0 KEGG_PATHWAY ece02020:Two-component system 5 2.51256281407 0.901662340872 946035,946038,948667,948631,946467 88 94 1269 0.767045454545 1.0 0.999999999981 100.0 KEGG_PATHWAY ecg02020:Two-component system 6 3.01507537688 0.904090239538 946035,946608,946038,948667,948631,946467 88 113 1269 0.765687851971 1.0 0.999999999981 100.0 KEGG_PATHWAY ecc02020:Two-component system 5 2.51256281407 0.91474349105 946035,946038,948667,948631,946467 88 97 1269 0.74332239925 1.0 0.999999999991 100.0 Annotation Cluster 79 Enrichment Score: 0.0520527063414 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR KEGG_PATHWAY ecf02010:ABC transporters 8 4.02010050251 0.83413598188 948538,948537,947962,946323,945504,945673,946375,946889 88 134 1269 0.86092265943 1.0 0.999999999829 100.0 KEGG_PATHWAY ecm02010:ABC transporters 8 4.02010050251 0.851080354884 948538,948537,947962,946323,945673,946375,946889,948594 88 137 1269 0.842070338421 1.0 0.99999999987 100.0 KEGG_PATHWAY ecw02010:ABC transporters 7 3.5175879397 0.908074216784 948538,948537,947962,946323,945673,946375,946889 88 132 1269 0.76472107438 1.0 0.999999999985 100.0 KEGG_PATHWAY ecx02010:ABC transporters 6 3.01507537688 0.960418259313 948538,948537,947962,946323,946375,946889 88 132 1269 0.655475206612 1.0 1.0 100.0 Annotation Cluster 80 Enrichment Score: 0.0482105879291 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0015849~organic acid transport 4 2.01005025126 0.89493071144 948591,948656,945000,945422 148 87 2508 0.779123951538 1.0 0.999976801961 100.0 GOTERM_BP_FAT GO:0046942~carboxylic acid transport 4 2.01005025126 0.89493071144 948591,948656,945000,945422 148 87 2508 0.779123951538 1.0 0.999976801961 100.0 Annotation Cluster 81 Enrichment Score: 0.0456603212012 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0000270~peptidoglycan metabolic process 3 1.50753768844 0.898581241212 945494,947692,947655 148 64 2508 0.794341216216 1.0 0.99997792604 100.0 GOTERM_BP_FAT GO:0030203~glycosaminoglycan metabolic process 3 1.50753768844 0.898581241212 945494,947692,947655 148 64 2508 0.794341216216 1.0 0.99997792604 100.0 GOTERM_BP_FAT GO:0006022~aminoglycan metabolic process 3 1.50753768844 0.903450453781 945494,947692,947655 148 65 2508 0.782120582121 1.0 0.999980279507 100.0 Annotation Cluster 82 Enrichment Score: 0.0285945128057 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS signal 19 9.54773869347 0.936189250361 945494,947741,945005,948538,948548,948713,947947,948845,945713,947962,944967,946035,944945,946942,948571,944841,4056027,947331,946375 199 439 3598 0.782523093829 1.0 0.999686282948 100.0 UP_SEQ_FEATURE signal peptide 19 9.54773869347 0.936369640433 945494,947741,945005,948538,948548,948713,947947,948845,945713,947962,944967,946035,944945,946942,948571,944841,4056027,947331,946375 199 439 3597 0.782305605476 1.0 1.0 100.0 Annotation Cluster 83 Enrichment Score: 0.0105617148678 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0031090~organelle membrane 23 11.5577889447 0.962758818212 948066,947264,949120,948812,948168,944994,945673,948540,945741,945000,947059,948136,945233,945403,945725,945374,946038,945504,948591,945982,945526,948594,945422 89 509 1544 0.783912054922 1.0 0.999965766737 100.0 GOTERM_CC_FAT GO:0019866~organelle inner membrane 22 11.0552763819 0.978196356174 948066,947264,949120,948812,948168,944994,945673,948540,945741,945000,947059,948136,945233,945403,945374,946038,945504,948591,945982,945526,948594,945422 89 508 1544 0.751304963284 1.0 0.999987018621 100.0 GOTERM_CC_FAT GO:0031967~organelle envelope 22 11.0552763819 0.978196356174 948066,947264,949120,948812,948168,944994,945673,948540,945741,945000,947059,948136,945233,945403,945374,946038,945504,948591,945982,945526,948594,945422 89 508 1544 0.751304963284 1.0 0.999987018621 100.0 GOTERM_CC_FAT GO:0031975~envelope 28 14.0703517588 0.984880534356 948066,947264,947741,949120,948548,948168,946608,948540,945741,947059,945233,945403,945374,945504,946038,948591,945526,948594,945422,945494,948812,944994,945673,945000,948136,944967,945982,4056027 89 633 1544 0.767382004722 1.0 0.999991226825 100.0 Annotation Cluster 84 Enrichment Score: 0.00839246184205 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS transmembrane 36 18.0904522613 0.964652496986 948066,947264,949120,948548,948697,948321,948168,946608,948540,947649,945233,945403,945379,945374,946038,945504,946981,948591,945422,948594,945021,945477,948812,944994,945673,948656,1450286,946134,945000,945474,945140,947655,945901,944967,945982,945984 199 811 3598 0.802582579978 1.0 0.999927891974 100.0 UP_SEQ_FEATURE transmembrane region 34 17.0854271357 0.976557779153 948066,947264,949120,948548,948697,948321,948168,946608,948540,947649,945233,945403,945379,945374,946038,945504,946981,948591,945422,948594,945477,948812,944994,945673,948656,1450286,946134,945000,945474,945140,945901,944967,945982,945984 199 790 3597 0.777927612747 1.0 1.0 100.0 GOTERM_CC_FAT GO:0016021~integral to membrane 38 19.0954773869 0.986563501643 948066,947264,949120,948548,948697,948321,948168,946608,948540,947649,945233,945403,945379,945374,946038,945504,946981,948591,945422,948594,945021,945477,945296,948812,944994,945673,948656,1450286,946134,945000,945474,945140,947655,945901,944967,947397,945982,945984 89 817 1544 0.806898353802 1.0 0.999988130372 100.0 GOTERM_CC_FAT GO:0031224~intrinsic to membrane 40 20.1005025126 0.995947100101 948066,947264,949120,948548,948697,948321,948168,946608,948540,947649,945713,945233,945403,945379,945374,946038,945504,946981,948591,945422,948594,945494,945021,945477,945296,948812,944994,945673,948656,1450286,946134,945000,945474,945140,947655,945901,944967,947397,945982,945984 89 886 1544 0.783219621072 1.0 0.999993697817 100.0 Annotation Cluster 85 Enrichment Score: 0.00687167242977 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_BP_FAT GO:0030001~metal ion transport 3 1.50753768844 0.978289476247 948168,946375,945474 148 94 2508 0.540828062105 1.0 0.999999959325 100.0 GOTERM_BP_FAT GO:0006812~cation transport 3 1.50753768844 0.990351294129 948168,946375,945474 148 109 2508 0.466402181999 1.0 0.999999998633 100.0 Annotation Cluster 86 Enrichment Score: 0.00509016584493 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR GOTERM_CC_FAT GO:0009274~peptidoglycan-based cell wall 29 14.5728643216 0.987314459269 948066,947264,949120,948548,948168,946608,948540,945741,947059,945233,945403,945374,945504,946038,948591,945526,948594,945422,948812,944994,945673,946134,945000,947655,947692,944967,945725,945982,947043 89 657 1544 0.765755134849 1.0 0.999981875232 100.0 GOTERM_CC_FAT GO:0005618~cell wall 29 14.5728643216 0.988109106273 948066,947264,949120,948548,948168,946608,948540,945741,947059,945233,945403,945374,945504,946038,948591,945526,948594,945422,948812,944994,945673,946134,945000,947655,947692,944967,945725,945982,947043 89 659 1544 0.763431143544 1.0 0.999973867716 100.0 GOTERM_CC_FAT GO:0030312~external encapsulating structure 32 16.0804020101 0.989621457737 948066,947264,947741,949120,948548,948168,946608,948540,945741,947059,945233,945403,945374,946038,945504,948591,945526,948594,945422,945494,948812,944994,945673,946134,945000,947655,947692,944967,945725,945982,947043,4056027 89 718 1544 0.773183937905 1.0 0.999969010184 100.0 Annotation Cluster 87 Enrichment Score: 0.00359424420674 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR SP_PIR_KEYWORDS cell membrane 42 21.1055276382 0.987395632643 948066,947264,949120,948548,948321,948168,946608,948540,946889,945741,947059,947649,945713,945233,945403,945379,945374,946038,945504,948591,945422,948594,945494,945021,945477,948537,948812,944994,945673,948656,1450286,946134,945000,945474,945140,946792,945901,944967,946323,948482,945982,945984 199 978 3598 0.776458982027 1.0 0.999994740692 100.0 SP_PIR_KEYWORDS membrane 44 22.1105527638 0.988576234518 948066,947264,949120,948548,948697,948321,948168,946608,948540,946889,945741,947059,947649,945713,945233,945403,945379,945374,946038,945504,946981,948591,945422,948594,945494,945021,945477,948537,948812,944994,945673,948656,1450286,946134,945000,945474,945140,946792,945901,944967,946323,948482,945982,945984 199 1022 3598 0.778412611 1.0 0.999995307271 100.0 GOTERM_CC_FAT GO:0005886~plasma membrane 43 21.608040201 0.999346048712 948066,947264,949120,948548,948321,948168,946608,948540,946889,945741,947059,947649,945713,945233,945403,945379,945374,946038,945504,948591,945422,948594,945494,945021,945477,947404,948537,948812,944994,945673,948656,1450286,946134,945000,945474,945140,946792,945901,944967,946323,948482,945982,945984 89 980 1544 0.761201559275 1.0 0.999999767876 100.0 Annotation Cluster 88 Enrichment Score: 0.00155805455027 Category Term Count % Pvalue Genes List Total Pop Hits Pop Total Fold Enrichment Bonferroni Benjamini FDR UP_SEQ_FEATURE topological domain:Periplasmic 19 9.54773869347 0.994256188771 948066,947264,949120,945477,948548,948812,948168,946608,944994,948540,948656,945233,945403,944967,946038,948591,945982,948594,945422 199 529 3597 0.649210133845 1.0 1.0 100.0 UP_SEQ_FEATURE topological domain:Cytoplasmic 17 8.54271356784 0.998586264255 948066,947264,945477,949120,948812,948168,946608,944994,948540,948656,945233,945403,946038,948591,945982,948594,945422 199 527 3597 0.583076673691 1.0 1.0 100.0