34 |
0.007003 |
0.6129 |
b4199 |
yjfY |
-12.43 |
0.013073 |
184 -- 195 |
46 -- 57 |
YhcN family protein periplasmic |
|
_____________183__________196\n_____________|____________|\n5'-AGG...GUCAG____________UAUCU...ACG-3'\n______________CCGUCGAGGAGG\n______________|||||:|:||||\n______________GGCAGUUUCUCC\n3'-UUU...AACCG____________UUAAA...ACA-5'\n_____________|____________|\n_____________58___________45\n |
189 -- 195 |
46 -- 52 |
-19.9606 kcal/mol |
4.79886 kcal/mol |
2.7365 kcal/mol |
183 196@LB@ | |@LB@5'-AGG...GUCAG UAUCU...ACG-3'@LB@ CCGUCGAGGAGG@LB@ |||||:|:||||@LB@ GGCAGUUUCUCC@LB@3'-UUU...AACCG UUAAA...ACA-5'@LB@ | |@LB@ 58 45@LB@@LB@@LB@Energy -12.43 kcal/mol@LB@Hybridization Energy -19.9606 kcal/mol@LB@Unfolding Energy - mRNA 4.79886 kcal/mol@LB@Unfolding Energy - sRNA 2.7365 kcal/mol@LB@@LB@Position - mRNA 184 -- 195@LB@Position - sRNA 46 -- 57@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 46 -- 52@LB@ |
35 |
0.00713 |
0.6129 |
b2025 |
hisF |
-8.66 |
0.076851 |
182 -- 193 |
46 -- 57 |
imidazole glycerol phosphate synthase catalytic subunit with HisH |
|
_____________181__________194\n_____________|____________|\n5'-UCG...AUUCA____G_______CCAUC...UGC-3'\n______________CCGU_AAGGAGG\n______________||||_||:||||\n______________GGCA_UUUCUCC\n3'-UUU...AACCG____G_______UUAAA...ACA-5'\n_____________|____________|\n_____________58___________45\n |
187 -- 193 |
46 -- 52 |
-16.1254 kcal/mol |
4.72855 kcal/mol |
2.7365 kcal/mol |
181 194@LB@ | |@LB@5'-UCG...AUUCA G CCAUC...UGC-3'@LB@ CCGU AAGGAGG@LB@ |||| ||:||||@LB@ GGCA UUUCUCC@LB@3'-UUU...AACCG G UUAAA...ACA-5'@LB@ | |@LB@ 58 45@LB@@LB@@LB@Energy -8.66 kcal/mol@LB@Hybridization Energy -16.1254 kcal/mol@LB@Unfolding Energy - mRNA 4.72855 kcal/mol@LB@Unfolding Energy - sRNA 2.7365 kcal/mol@LB@@LB@Position - mRNA 182 -- 193@LB@Position - sRNA 46 -- 57@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 46 -- 52@LB@ |
36 |
0.007218 |
0.6129 |
b3938 |
metJ |
-9.22 |
0.059290 |
181 -- 189 |
45 -- 53 |
transcriptional repressor S-adenosylmethionine-binding |
|
_____________180_______190\n_____________|_________|\n5'-UCU...AUUGA_________UUAAG...UGU-3'\n______________CGAAGAGGA\n______________|:|||||||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
183 -- 189 |
45 -- 51 |
-12.478 kcal/mol |
2.34125 kcal/mol |
0.917553 kcal/mol |
180 190@LB@ | |@LB@5'-UCU...AUUGA UUAAG...UGU-3'@LB@ CGAAGAGGA@LB@ |:|||||||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -9.22 kcal/mol@LB@Hybridization Energy -12.478 kcal/mol@LB@Unfolding Energy - mRNA 2.34125 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 181 -- 189@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 183 -- 189@LB@Position Seed - sRNA 45 -- 51@LB@ |
37 |
0.007616 |
0.6129 |
b4141 |
yjeH |
-11.12 |
0.024259 |
30 -- 40 |
44 -- 54 |
putative transporter |
|
_____________29__________41\n_____________|___________|\n5'-CAG...CCCCU___________AAAGA...CUG-3'\n______________UCAAGGGGGAA\n______________||||:|:||||\n______________AGUUUCUCCUU\n3'-UUU...CGGGC___________AAAGU...ACA-5'\n_____________|___________|\n_____________55__________43\n |
34 -- 40 |
44 -- 50 |
-14.4219 kcal/mol |
2.36204 kcal/mol |
0.939671 kcal/mol |
29 41@LB@ | |@LB@5'-CAG...CCCCU AAAGA...CUG-3'@LB@ UCAAGGGGGAA@LB@ ||||:|:||||@LB@ AGUUUCUCCUU@LB@3'-UUU...CGGGC AAAGU...ACA-5'@LB@ | |@LB@ 55 43@LB@@LB@@LB@Energy -11.12 kcal/mol@LB@Hybridization Energy -14.4219 kcal/mol@LB@Unfolding Energy - mRNA 2.36204 kcal/mol@LB@Unfolding Energy - sRNA 0.939671 kcal/mol@LB@@LB@Position - mRNA 30 -- 40@LB@Position - sRNA 44 -- 54@LB@Position Seed - mRNA 34 -- 40@LB@Position Seed - sRNA 44 -- 50@LB@ |
38 |
0.007716 |
0.6129 |
b0480 |
ushA |
-6.97 |
0.165152 |
186 -- 197 |
45 -- 55 |
bifunctional UDP-sugar hydrolase/5'-nucleotidase |
|
_____________185__________198\n_____________|____________|\n5'-AGG...AUCAG_________A__AGUAU...AAA-3'\n______________GUCAGGGAG_GA\n______________||||::|||_||\n______________CAGUUUCUC_CU\n3'-UUU...CCGGG____________UAAAG...ACA-5'\n_____________|____________|\n_____________56___________44\n |
188 -- 194 |
47 -- 53 |
-13.3467 kcal/mol |
5.44454 kcal/mol |
0.930875 kcal/mol |
185 198@LB@ | |@LB@5'-AGG...AUCAG A AGUAU...AAA-3'@LB@ GUCAGGGAG GA@LB@ ||||::||| ||@LB@ CAGUUUCUC CU@LB@3'-UUU...CCGGG UAAAG...ACA-5'@LB@ | |@LB@ 56 44@LB@@LB@@LB@Energy -6.97 kcal/mol@LB@Hybridization Energy -13.3467 kcal/mol@LB@Unfolding Energy - mRNA 5.44454 kcal/mol@LB@Unfolding Energy - sRNA 0.930875 kcal/mol@LB@@LB@Position - mRNA 186 -- 197@LB@Position - sRNA 45 -- 55@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 47 -- 53@LB@ |
39 |
0.007917 |
0.6129 |
b3657 |
yicJ |
-11.19 |
0.023423 |
220 -- 230 |
47 -- 57 |
putative transporter |
|
_____________219_________231\n_____________|___________|\n5'-CAG...GUUGU___________AAAAU...UGU-3'\n______________CCGUUAAAGAG\n______________||||:||||||\n______________GGCAGUUUCUC\n3'-UUU...AACCG___________CUUAA...ACA-5'\n_____________|___________|\n_____________58__________46\n |
224 -- 230 |
47 -- 53 |
-15.9196 kcal/mol |
1.98973 kcal/mol |
2.73556 kcal/mol |
219 231@LB@ | |@LB@5'-CAG...GUUGU AAAAU...UGU-3'@LB@ CCGUUAAAGAG@LB@ ||||:||||||@LB@ GGCAGUUUCUC@LB@3'-UUU...AACCG CUUAA...ACA-5'@LB@ | |@LB@ 58 46@LB@@LB@@LB@Energy -11.19 kcal/mol@LB@Hybridization Energy -15.9196 kcal/mol@LB@Unfolding Energy - mRNA 1.98973 kcal/mol@LB@Unfolding Energy - sRNA 2.73556 kcal/mol@LB@@LB@Position - mRNA 220 -- 230@LB@Position - sRNA 47 -- 57@LB@Position Seed - mRNA 224 -- 230@LB@Position Seed - sRNA 47 -- 53@LB@ |
40 |
0.007925 |
0.6129 |
b1109 |
ndh |
-7.04 |
0.160101 |
187 -- 195 |
46 -- 54 |
respiratory NADH dehydrogenase 2/cupric reductase |
|
_____________186_______196\n_____________|_________|\n5'-UGU...UAAAU_________UCACG...AAG-3'\n______________UUAAGGGGG\n______________|:||:|:||\n______________AGUUUCUCC\n3'-UUU...CGGGC_________UUAAA...ACA-5'\n_____________|_________|\n_____________55________45\n |
189 -- 195 |
46 -- 52 |
-9.48398 kcal/mol |
1.51964 kcal/mol |
0.922697 kcal/mol |
186 196@LB@ | |@LB@5'-UGU...UAAAU UCACG...AAG-3'@LB@ UUAAGGGGG@LB@ |:||:|:||@LB@ AGUUUCUCC@LB@3'-UUU...CGGGC UUAAA...ACA-5'@LB@ | |@LB@ 55 45@LB@@LB@@LB@Energy -7.04 kcal/mol@LB@Hybridization Energy -9.48398 kcal/mol@LB@Unfolding Energy - mRNA 1.51964 kcal/mol@LB@Unfolding Energy - sRNA 0.922697 kcal/mol@LB@@LB@Position - mRNA 187 -- 195@LB@Position - sRNA 46 -- 54@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 46 -- 52@LB@ |
41 |
0.008018 |
0.6129 |
b1740 |
nadE |
-11.27 |
0.022577 |
258 -- 272 |
38 -- 52 |
NAD synthetase NH3/glutamine-dependent |
|
_____________257_____________273\n_____________|_______________|\n5'-UUC...AUGCU_________A_____CGUAG...ACC-3'\n______________GAAGAGGAA_UUCGU\n______________:||||||||_|||:|\n______________UUUCUCCUU_AAGUA\n3'-UUU...GGCAG_________A_____AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
260 -- 266 |
44 -- 50 |
-15.8385 kcal/mol |
3.49717 kcal/mol |
1.0693 kcal/mol |
257 273@LB@ | |@LB@5'-UUC...AUGCU A CGUAG...ACC-3'@LB@ GAAGAGGAA UUCGU@LB@ :|||||||| |||:|@LB@ UUUCUCCUU AAGUA@LB@3'-UUU...GGCAG A AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -11.27 kcal/mol@LB@Hybridization Energy -15.8385 kcal/mol@LB@Unfolding Energy - mRNA 3.49717 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 258 -- 272@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 260 -- 266@LB@Position Seed - sRNA 44 -- 50@LB@ |
42 |
0.008125 |
0.6129 |
b2431 |
yfeX |
-9.88 |
0.043594 |
266 -- 278 |
44 -- 56 |
porphyrinogen oxidase cytoplasmic |
|
_____________265___________279\n_____________|_____________|\n5'-AUU...GCCAA___G_________GUUGA...CCA-3'\n______________CGU_AAAGGGGAA\n______________|||_||||:||||\n______________GCA_UUUCUCCUU\n3'-UUU...ACCGG___G_________AAAGU...ACA-5'\n_____________|_____________|\n_____________57____________43\n |
272 -- 278 |
44 -- 50 |
-15.4775 kcal/mol |
4.65199 kcal/mol |
0.948902 kcal/mol |
265 279@LB@ | |@LB@5'-AUU...GCCAA G GUUGA...CCA-3'@LB@ CGU AAAGGGGAA@LB@ ||| ||||:||||@LB@ GCA UUUCUCCUU@LB@3'-UUU...ACCGG G AAAGU...ACA-5'@LB@ | |@LB@ 57 43@LB@@LB@@LB@Energy -9.88 kcal/mol@LB@Hybridization Energy -15.4775 kcal/mol@LB@Unfolding Energy - mRNA 4.65199 kcal/mol@LB@Unfolding Energy - sRNA 0.948902 kcal/mol@LB@@LB@Position - mRNA 266 -- 278@LB@Position - sRNA 44 -- 56@LB@Position Seed - mRNA 272 -- 278@LB@Position Seed - sRNA 44 -- 50@LB@ |
43 |
0.008509 |
0.6129 |
b4322 |
uxuA |
-11.91 |
0.016653 |
184 -- 195 |
44 -- 55 |
mannonate hydrolase |
|
_____________183__________196\n_____________|____________|\n5'-CAU...ACUAU__G_________AAAUC...AUA-3'\n______________GU_AAAGAGGAA\n______________||_|||||||||\n______________CA_UUUCUCCUU\n3'-UUU...CCGGG__G_________AAAGU...ACA-5'\n_____________|____________|\n_____________56___________43\n |
189 -- 195 |
44 -- 50 |
-15.5118 kcal/mol |
2.65561 kcal/mol |
0.941432 kcal/mol |
183 196@LB@ | |@LB@5'-CAU...ACUAU G AAAUC...AUA-3'@LB@ GU AAAGAGGAA@LB@ || |||||||||@LB@ CA UUUCUCCUU@LB@3'-UUU...CCGGG G AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -11.91 kcal/mol@LB@Hybridization Energy -15.5118 kcal/mol@LB@Unfolding Energy - mRNA 2.65561 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 184 -- 195@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 44 -- 50@LB@ |