135 |
0.02628 |
0.6177 |
b3547 |
yhjX |
-9.70 |
0.047334 |
158 -- 184 |
28 -- 55 |
pyruvate-inducible inner membrane protein putative transporter |
|
_____________157___________________________185\n_____________|_____________________________|\n5'-UAA...UGGUU_____C____AUU____C___________CUGCA...UUA-3'\n______________GUCGG_AGAG___UUUC___UUUUUAUUA\n______________|||::_||||___||||___|||||||||\n______________CAGUU_UCUC___AAAG___AAAAAUAAU\n3'-UUU...CCGGG__________CUU____UAA_________AAUAC...ACA-5'\n_____________|_____________________________|\n_____________56____________________________27\n |
178 -- 184 |
28 -- 34 |
-15.2509 kcal/mol |
4.36169 kcal/mol |
1.18814 kcal/mol |
157 185@LB@ | |@LB@5'-UAA...UGGUU C AUU C CUGCA...UUA-3'@LB@ GUCGG AGAG UUUC UUUUUAUUA@LB@ |||:: |||| |||| |||||||||@LB@ CAGUU UCUC AAAG AAAAAUAAU@LB@3'-UUU...CCGGG CUU UAA AAUAC...ACA-5'@LB@ | |@LB@ 56 27@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -15.2509 kcal/mol@LB@Unfolding Energy - mRNA 4.36169 kcal/mol@LB@Unfolding Energy - sRNA 1.18814 kcal/mol@LB@@LB@Position - mRNA 158 -- 184@LB@Position - sRNA 28 -- 55@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 28 -- 34@LB@ |
136 |
0.02642 |
0.6177 |
b4036 |
lamB |
-8.19 |
0.095416 |
26 -- 54 |
55 -- 84 |
maltose outer membrane porin (maltoporin) |
|
_____________25_____________________________55\n_____________|______________________________|\n5'-CGC...GGUAG_____________CAU_______C______CCGCC...GUU-3'\n______________AAGAAGGU_GCCA___UCGCUAU_GGCCUG\n______________||:||::|_||||___|||||||_||||:|\n______________UUUUUUUA_CGGU___AGCGAUA_CCGGGC\n___________3'-________C____UAU_______A______AGUUU...ACA-5'\n______________|_____________________________|\n______________84____________________________54\n |
41 -- 47 |
62 -- 68 |
-32.2235 kcal/mol |
10.7352 kcal/mol |
13.2983 kcal/mol |
25 55@LB@ | |@LB@5'-CGC...GGUAG CAU C CCGCC...GUU-3'@LB@ AAGAAGGU GCCA UCGCUAU GGCCUG@LB@ ||:||::| |||| ||||||| ||||:|@LB@ UUUUUUUA CGGU AGCGAUA CCGGGC@LB@ 3'- C UAU A AGUUU...ACA-5'@LB@ | |@LB@ 84 54@LB@@LB@@LB@Energy -8.19 kcal/mol@LB@Hybridization Energy -32.2235 kcal/mol@LB@Unfolding Energy - mRNA 10.7352 kcal/mol@LB@Unfolding Energy - sRNA 13.2983 kcal/mol@LB@@LB@Position - mRNA 26 -- 54@LB@Position - sRNA 55 -- 84@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 62 -- 68@LB@ |
137 |
0.02646 |
0.6177 |
b3807 |
cyaY |
-4.99 |
0.375460 |
213 -- 221 |
38 -- 46 |
iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein |
|
_____________212_______222\n_____________|_________|\n5'-UGA...ACAGU_________CGCCU...AAA-3'\n______________GAAUUUCAU\n______________|||||||||\n______________CUUAAAGUA\n3'-UUU...UUCUC_________AAAAA...ACA-5'\n_____________|_________|\n_____________47________37\n |
215 -- 221 |
38 -- 44 |
-7.89908 kcal/mol |
1.90809 kcal/mol |
1.00074 kcal/mol |
212 222@LB@ | |@LB@5'-UGA...ACAGU CGCCU...AAA-3'@LB@ GAAUUUCAU@LB@ |||||||||@LB@ CUUAAAGUA@LB@3'-UUU...UUCUC AAAAA...ACA-5'@LB@ | |@LB@ 47 37@LB@@LB@@LB@Energy -4.99 kcal/mol@LB@Hybridization Energy -7.89908 kcal/mol@LB@Unfolding Energy - mRNA 1.90809 kcal/mol@LB@Unfolding Energy - sRNA 1.00074 kcal/mol@LB@@LB@Position - mRNA 213 -- 221@LB@Position - sRNA 38 -- 46@LB@Position Seed - mRNA 215 -- 221@LB@Position Seed - sRNA 38 -- 44@LB@ |
138 |
0.02658 |
0.6177 |
b2331 |
smrB |
-9.17 |
0.060779 |
224 -- 232 |
45 -- 53 |
putative DNA endonuclease |
|
_____________223_______233\n_____________|_________|\n5'-UCA...CUUAG_________CCAGG...GAC-3'\n______________CGAGGAGGA\n______________|:|:|||||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
226 -- 232 |
45 -- 51 |
-12.8038 kcal/mol |
2.72026 kcal/mol |
0.917553 kcal/mol |
223 233@LB@ | |@LB@5'-UCA...CUUAG CCAGG...GAC-3'@LB@ CGAGGAGGA@LB@ |:|:|||||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -9.17 kcal/mol@LB@Hybridization Energy -12.8038 kcal/mol@LB@Unfolding Energy - mRNA 2.72026 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 224 -- 232@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 226 -- 232@LB@Position Seed - sRNA 45 -- 51@LB@ |
140 |
0.02703 |
0.6177 |
b3447 |
ggt |
-5.41 |
0.319095 |
66 -- 81 |
38 -- 54 |
gamma-glutamyltranspeptidase |
|
_____________65________________82\n_____________|_________________|\n5'-GUU...AAGAA________UC_______CGCGU...CGU-3'\n______________UCAGA_AG__GUUUCAU\n______________|||:|_||__:||||||\n______________AGUUU_UC__UAAAGUA\n3'-UUU...CGGGC_____C__CU_______AAAAA...ACA-5'\n_____________|_________________|\n_____________55________________37\n |
75 -- 81 |
38 -- 44 |
-8.61894 kcal/mol |
2.03989 kcal/mol |
1.17036 kcal/mol |
65 82@LB@ | |@LB@5'-GUU...AAGAA UC CGCGU...CGU-3'@LB@ UCAGA AG GUUUCAU@LB@ |||:| || :||||||@LB@ AGUUU UC UAAAGUA@LB@3'-UUU...CGGGC C CU AAAAA...ACA-5'@LB@ | |@LB@ 55 37@LB@@LB@@LB@Energy -5.41 kcal/mol@LB@Hybridization Energy -8.61894 kcal/mol@LB@Unfolding Energy - mRNA 2.03989 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 66 -- 81@LB@Position - sRNA 38 -- 54@LB@Position Seed - mRNA 75 -- 81@LB@Position Seed - sRNA 38 -- 44@LB@ |
141 |
0.02753 |
0.6177 |
b3215 |
yhcA |
-6.30 |
0.221284 |
185 -- 194 |
39 -- 48 |
putative periplasmic chaperone protein |
|
_____________184________195\n_____________|__________|\n5'-ACG...AUUAC__________AUUUA...AAA-3'\n______________AGGAGUUUUA\n______________||||:|||:|\n______________UCCUUAAAGU\n3'-UUU...GUUUC__________AAAAA...ACA-5'\n_____________|__________|\n_____________49_________38\n |
187 -- 193 |
40 -- 46 |
-10.0044 kcal/mol |
2.68942 kcal/mol |
1.01866 kcal/mol |
184 195@LB@ | |@LB@5'-ACG...AUUAC AUUUA...AAA-3'@LB@ AGGAGUUUUA@LB@ ||||:|||:|@LB@ UCCUUAAAGU@LB@3'-UUU...GUUUC AAAAA...ACA-5'@LB@ | |@LB@ 49 38@LB@@LB@@LB@Energy -6.30 kcal/mol@LB@Hybridization Energy -10.0044 kcal/mol@LB@Unfolding Energy - mRNA 2.68942 kcal/mol@LB@Unfolding Energy - sRNA 1.01866 kcal/mol@LB@@LB@Position - mRNA 185 -- 194@LB@Position - sRNA 39 -- 48@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 40 -- 46@LB@ |
142 |
0.02758 |
0.6177 |
b3186 |
rplU |
-10.01 |
0.040887 |
186 -- 200 |
38 -- 52 |
50S ribosomal subunit protein L21 |
|
_____________185_____________201\n_____________|_______________|\n5'-UUA...GCGCG____C__________AUGUA...UUG-3'\n______________GAAG_GGAGUUUUAU\n______________:|||_|||:|||:||\n______________UUUC_CCUUAAAGUA\n3'-UUU...GGCAG____U__________AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
194 -- 200 |
38 -- 44 |
-13.3778 kcal/mol |
2.29537 kcal/mol |
1.0693 kcal/mol |
185 201@LB@ | |@LB@5'-UUA...GCGCG C AUGUA...UUG-3'@LB@ GAAG GGAGUUUUAU@LB@ :||| |||:|||:||@LB@ UUUC CCUUAAAGUA@LB@3'-UUU...GGCAG U AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -10.01 kcal/mol@LB@Hybridization Energy -13.3778 kcal/mol@LB@Unfolding Energy - mRNA 2.29537 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 186 -- 200@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 194 -- 200@LB@Position Seed - sRNA 38 -- 44@LB@ |
143 |
0.02773 |
0.6177 |
b0409 |
secF |
-7.84 |
0.111773 |
181 -- 195 |
43 -- 55 |
SecYEG protein translocase auxillary subunit |
|
_____________180_____________196\n_____________|_______________|\n5'-CUU...AAGCU_____UCU_______GCGAU...UGU-3'\n______________GUCAA___GAGGAGU\n______________|||||___|||||:|\n______________CAGUU___CUCCUUA\n3'-UUU...CCGGG_____U_________AAGUA...ACA-5'\n_____________|_______________|\n_____________56______________42\n |
189 -- 195 |
43 -- 49 |
-13.7308 kcal/mol |
4.94116 kcal/mol |
0.946481 kcal/mol |
180 196@LB@ | |@LB@5'-CUU...AAGCU UCU GCGAU...UGU-3'@LB@ GUCAA GAGGAGU@LB@ ||||| |||||:|@LB@ CAGUU CUCCUUA@LB@3'-UUU...CCGGG U AAGUA...ACA-5'@LB@ | |@LB@ 56 42@LB@@LB@@LB@Energy -7.84 kcal/mol@LB@Hybridization Energy -13.7308 kcal/mol@LB@Unfolding Energy - mRNA 4.94116 kcal/mol@LB@Unfolding Energy - sRNA 0.946481 kcal/mol@LB@@LB@Position - mRNA 181 -- 195@LB@Position - sRNA 43 -- 55@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 43 -- 49@LB@ |
144 |
0.02798 |
0.6177 |
b0682 |
chiQ |
-9.70 |
0.047426 |
184 -- 197 |
41 -- 56 |
chitosugar-induced verified lipoprotein |
|
_____________183______________198\n_____________|________________|\n5'-CGG...CCGCA____U___________GCUAU...ACA-3'\n______________CGUU___GAGGAAUUU\n______________|||:___|||||||||\n______________GCAG___CUCCUUAAA\n3'-UUU...ACCGG____UUU_________GUAAA...ACA-5'\n_____________|________________|\n_____________57_______________40\n |
191 -- 197 |
41 -- 47 |
-13.1137 kcal/mol |
2.46147 kcal/mol |
0.955312 kcal/mol |
183 198@LB@ | |@LB@5'-CGG...CCGCA U GCUAU...ACA-3'@LB@ CGUU GAGGAAUUU@LB@ |||: |||||||||@LB@ GCAG CUCCUUAAA@LB@3'-UUU...ACCGG UUU GUAAA...ACA-5'@LB@ | |@LB@ 57 40@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -13.1137 kcal/mol@LB@Unfolding Energy - mRNA 2.46147 kcal/mol@LB@Unfolding Energy - sRNA 0.955312 kcal/mol@LB@@LB@Position - mRNA 184 -- 197@LB@Position - sRNA 41 -- 56@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 41 -- 47@LB@ |
145 |
0.02855 |
0.6177 |
b2252 |
ais |
-5.71 |
0.282709 |
182 -- 202 |
38 -- 55 |
putative LPS core heptose(II)-phosphate phosphatase |
|
_____________181___________________203\n_____________|_____________________|\n5'-ACC...CGCUU___UAU___U_______A___GUUAG...GGA-3'\n______________GUC___AGG_GGAGUUU_CGU\n______________|||___|:|_|||:|||_|:|\n______________CAG___UUC_CCUUAAA_GUA\n3'-UUU...CCGGG___U_____U___________AAAAA...ACA-5'\n_____________|_____________________|\n_____________56____________________37\n |
192 -- 198 |
41 -- 47 |
-12.7294 kcal/mol |
5.84979 kcal/mol |
1.17036 kcal/mol |
181 203@LB@ | |@LB@5'-ACC...CGCUU UAU U A GUUAG...GGA-3'@LB@ GUC AGG GGAGUUU CGU@LB@ ||| |:| |||:||| |:|@LB@ CAG UUC CCUUAAA GUA@LB@3'-UUU...CCGGG U U AAAAA...ACA-5'@LB@ | |@LB@ 56 37@LB@@LB@@LB@Energy -5.71 kcal/mol@LB@Hybridization Energy -12.7294 kcal/mol@LB@Unfolding Energy - mRNA 5.84979 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 182 -- 202@LB@Position - sRNA 38 -- 55@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 41 -- 47@LB@ |