| 95 |
0.01635 |
0.5385 |
b2287 |
nuoB |
-8.27 |
0.206762 |
33 -- 42 |
71 -- 80 |
NADH:ubiquinone oxidoreductase chain B |
|
_____________32_________43\n_____________|__________|\n5'-CAU...GCUGG__A_______UGGAA...UUA-3'\n______________GU_GGCUUUG\n______________||_||||||:\n______________CA_CCGAAAU\n3'-CGC...AAGUG__A_______CAAUA...AAG-5'\n_____________|__________|\n_____________81_________70\n |
36 -- 42 |
71 -- 77 |
-10.0496 kcal/mol |
1.54713 kcal/mol |
0.236872 kcal/mol |
32 43@LB@ | |@LB@5'-CAU...GCUGG A UGGAA...UUA-3'@LB@ GU GGCUUUG@LB@ || ||||||:@LB@ CA CCGAAAU@LB@3'-CGC...AAGUG A CAAUA...AAG-5'@LB@ | |@LB@ 81 70@LB@@LB@@LB@Energy -8.27 kcal/mol@LB@Hybridization Energy -10.0496 kcal/mol@LB@Unfolding Energy - mRNA 1.54713 kcal/mol@LB@Unfolding Energy - sRNA 0.236872 kcal/mol@LB@@LB@Position - mRNA 33 -- 42@LB@Position - sRNA 71 -- 80@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 71 -- 77@LB@ |
| 136 |
0.02309 |
0.5385 |
b3223 |
nanE |
-8.63 |
0.180292 |
34 -- 47 |
74 -- 86 |
putative N-acetylmannosamine-6-P epimerase |
|
_____________33_____________48\n_____________|______________|\n5'-AUC...CUCGC_____G________GCGCC...AAA-3'\n______________GUUCA_CGUUGGUU\n______________|||||_||||||:|\n______________CAAGU_GCAACCGA\n3'-CGC...GUUUU______________AAUCA...AAG-5'\n_____________|______________|\n_____________87_____________73\n |
41 -- 47 |
74 -- 80 |
-15.9355 kcal/mol |
6.79344 kcal/mol |
0.513318 kcal/mol |
33 48@LB@ | |@LB@5'-AUC...CUCGC G GCGCC...AAA-3'@LB@ GUUCA CGUUGGUU@LB@ ||||| ||||||:|@LB@ CAAGU GCAACCGA@LB@3'-CGC...GUUUU AAUCA...AAG-5'@LB@ | |@LB@ 87 73@LB@@LB@@LB@Energy -8.63 kcal/mol@LB@Hybridization Energy -15.9355 kcal/mol@LB@Unfolding Energy - mRNA 6.79344 kcal/mol@LB@Unfolding Energy - sRNA 0.513318 kcal/mol@LB@@LB@Position - mRNA 34 -- 47@LB@Position - sRNA 74 -- 86@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 74 -- 80@LB@ |
| 50 |
0.0104 |
0.5385 |
b0661 |
miaB |
-10.15 |
0.099644 |
35 -- 45 |
74 -- 85 |
tRNA-i(6)A37 methylthiotransferase |
|
_____________34___________46\n_____________|____________|\n5'-CGC...GCAAU____________GAUUU...AAC-3'\n______________UUC_CGUUGGUU\n______________|||_||||||:|\n______________AAG_GCAACCGA\n3'-CGC...UUUUC___U________AAUCA...AAG-5'\n_____________|____________|\n_____________86___________73\n |
39 -- 45 |
74 -- 80 |
-13.4892 kcal/mol |
2.82751 kcal/mol |
0.512001 kcal/mol |
34 46@LB@ | |@LB@5'-CGC...GCAAU GAUUU...AAC-3'@LB@ UUC CGUUGGUU@LB@ ||| ||||||:|@LB@ AAG GCAACCGA@LB@3'-CGC...UUUUC U AAUCA...AAG-5'@LB@ | |@LB@ 86 73@LB@@LB@@LB@Energy -10.15 kcal/mol@LB@Hybridization Energy -13.4892 kcal/mol@LB@Unfolding Energy - mRNA 2.82751 kcal/mol@LB@Unfolding Energy - sRNA 0.512001 kcal/mol@LB@@LB@Position - mRNA 35 -- 45@LB@Position - sRNA 74 -- 85@LB@Position Seed - mRNA 39 -- 45@LB@Position Seed - sRNA 74 -- 80@LB@ |
| 112 |
0.0191 |
0.5385 |
b0854 |
potF |
-9.27 |
0.140763 |
36 -- 50 |
64 -- 78 |
putrescine ABC transporter periplasmic binding protein |
|
_____________35______________51\n_____________|_______________|\n5'-UAC...AACCC_____AA________UUGCG...ACA-3'\n______________UGGCU__AGUUAUUC\n______________|||||__||||||||\n______________ACCGA__UCAAUAAG\n3'-CGC...GUGCA_____AA________CUCAA...AAG-5'\n_____________|_______________|\n_____________79______________63\n |
44 -- 50 |
64 -- 70 |
-15.0609 kcal/mol |
5.5152 kcal/mol |
0.273858 kcal/mol |
35 51@LB@ | |@LB@5'-UAC...AACCC AA UUGCG...ACA-3'@LB@ UGGCU AGUUAUUC@LB@ ||||| ||||||||@LB@ ACCGA UCAAUAAG@LB@3'-CGC...GUGCA AA CUCAA...AAG-5'@LB@ | |@LB@ 79 63@LB@@LB@@LB@Energy -9.27 kcal/mol@LB@Hybridization Energy -15.0609 kcal/mol@LB@Unfolding Energy - mRNA 5.5152 kcal/mol@LB@Unfolding Energy - sRNA 0.273858 kcal/mol@LB@@LB@Position - mRNA 36 -- 50@LB@Position - sRNA 64 -- 78@LB@Position Seed - mRNA 44 -- 50@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 33 |
0.006009 |
0.5385 |
b1264 |
trpE |
-12.63 |
0.036478 |
39 -- 48 |
79 -- 88 |
component I of anthranilate synthase |
|
_____________38_________49\n_____________|__________|\n5'-UGU...UACGC__________AAAAA...CGG-3'\n______________AAGUUCACGU\n______________||||||||||\n______________UUCAAGUGCA\n3'-CGC...GCGUU__________ACCGA...AAG-5'\n_____________|__________|\n_____________89_________78\n |
42 -- 48 |
79 -- 85 |
-13.8612 kcal/mol |
0.721964 kcal/mol |
0.505265 kcal/mol |
38 49@LB@ | |@LB@5'-UGU...UACGC AAAAA...CGG-3'@LB@ AAGUUCACGU@LB@ ||||||||||@LB@ UUCAAGUGCA@LB@3'-CGC...GCGUU ACCGA...AAG-5'@LB@ | |@LB@ 89 78@LB@@LB@@LB@Energy -12.63 kcal/mol@LB@Hybridization Energy -13.8612 kcal/mol@LB@Unfolding Energy - mRNA 0.721964 kcal/mol@LB@Unfolding Energy - sRNA 0.505265 kcal/mol@LB@@LB@Position - mRNA 39 -- 48@LB@Position - sRNA 79 -- 88@LB@Position Seed - mRNA 42 -- 48@LB@Position Seed - sRNA 79 -- 85@LB@ |
| 186 |
0.03285 |
0.5559 |
b1003 |
yccJ |
-7.53 |
0.270746 |
41 -- 54 |
75 -- 88 |
uncharacterized protein |
|
_____________40_____________55\n_____________|______________|\n5'-CCU...UUCAC_________GC___ACGCC...GGU-3'\n______________AGGUUCGCG__GGU\n______________|:||||:||__||:\n______________UUCAAGUGC__CCG\n3'-CGC...GCGUU_________AA___AAAUC...AAG-5'\n_____________|______________|\n_____________89_____________74\n |
43 -- 49 |
80 -- 86 |
-16.6206 kcal/mol |
8.57413 kcal/mol |
0.515884 kcal/mol |
40 55@LB@ | |@LB@5'-CCU...UUCAC GC ACGCC...GGU-3'@LB@ AGGUUCGCG GGU@LB@ |:||||:|| ||:@LB@ UUCAAGUGC CCG@LB@3'-CGC...GCGUU AA AAAUC...AAG-5'@LB@ | |@LB@ 89 74@LB@@LB@@LB@Energy -7.53 kcal/mol@LB@Hybridization Energy -16.6206 kcal/mol@LB@Unfolding Energy - mRNA 8.57413 kcal/mol@LB@Unfolding Energy - sRNA 0.515884 kcal/mol@LB@@LB@Position - mRNA 41 -- 54@LB@Position - sRNA 75 -- 88@LB@Position Seed - mRNA 43 -- 49@LB@Position Seed - sRNA 80 -- 86@LB@ |
| 59 |
0.01163 |
0.5385 |
b1279 |
yciS |
-7.12 |
0.313424 |
44 -- 60 |
74 -- 90 |
DUF1049 family inner membrane protein function unknown |
|
_____________43________________61\n_____________|_________________|\n5'-ACC...AACAA_______A___C_____GAUUU...UGU-3'\n______________GAAAGUU_ACG_UGGUU\n______________:||||||_|||_|||:|\n______________UUUUCAA_UGC_ACCGA\n3'-CGC...AGGCG_______G___A_____AAUCA...AAG-5'\n_____________|_________________|\n_____________91________________73\n |
44 -- 50 |
84 -- 90 |
-13.3715 kcal/mol |
5.7376 kcal/mol |
0.517587 kcal/mol |
43 61@LB@ | |@LB@5'-ACC...AACAA A C GAUUU...UGU-3'@LB@ GAAAGUU ACG UGGUU@LB@ :|||||| ||| |||:|@LB@ UUUUCAA UGC ACCGA@LB@3'-CGC...AGGCG G A AAUCA...AAG-5'@LB@ | |@LB@ 91 73@LB@@LB@@LB@Energy -7.12 kcal/mol@LB@Hybridization Energy -13.3715 kcal/mol@LB@Unfolding Energy - mRNA 5.7376 kcal/mol@LB@Unfolding Energy - sRNA 0.517587 kcal/mol@LB@@LB@Position - mRNA 44 -- 60@LB@Position - sRNA 74 -- 90@LB@Position Seed - mRNA 44 -- 50@LB@Position Seed - sRNA 84 -- 90@LB@ |
| 161 |
0.02817 |
0.5559 |
b0852 |
rimK |
-8.21 |
0.210781 |
44 -- 79 |
81 -- 107 |
ribosomal protein S6 modification protein |
|
_____________43___________________________________80\n_____________|____________________________________|\n5'-AAC...CGCCG____A_______CGAUCAU______C___CAA____UAAAG...AUC-3'\n______________GGAU_CCUGGAG_______AUCCGC_GAA___UCAU\n______________||||_|||||||_______||||||_:||___|||:\n______________CCUA_GGACCUC_______UAGGCG_UUU___AGUG\n_________3'-CG_________________________U___CA_____CAACC...AAG-5'\n_____________|____________________________________|\n_____________108__________________________________80\n |
49 -- 55 |
97 -- 103 |
-27.5385 kcal/mol |
7.46513 kcal/mol |
11.8593 kcal/mol |
43 80@LB@ | |@LB@5'-AAC...CGCCG A CGAUCAU C CAA UAAAG...AUC-3'@LB@ GGAU CCUGGAG AUCCGC GAA UCAU@LB@ |||| ||||||| |||||| :|| |||:@LB@ CCUA GGACCUC UAGGCG UUU AGUG@LB@ 3'-CG U CA CAACC...AAG-5'@LB@ | |@LB@ 108 80@LB@@LB@@LB@Energy -8.21 kcal/mol@LB@Hybridization Energy -27.5385 kcal/mol@LB@Unfolding Energy - mRNA 7.46513 kcal/mol@LB@Unfolding Energy - sRNA 11.8593 kcal/mol@LB@@LB@Position - mRNA 44 -- 79@LB@Position - sRNA 81 -- 107@LB@Position Seed - mRNA 49 -- 55@LB@Position Seed - sRNA 97 -- 103@LB@ |
| 83 |
0.01501 |
0.5385 |
b2114 |
metG |
-6.55 |
0.379655 |
47 -- 64 |
63 -- 79 |
methionyl-tRNA synthetase |
|
_____________46_________________65\n_____________|__________________|\n5'-AUU...GUGAU_____CUG__A_______UUCAU...AUG-3'\n______________UUGGC___GG_UUGUUCG\n______________|||||___:|_||:||||\n______________AACCG___UC_AAUAAGC\n3'-CGC...AGUGC_____AAA__________UCAAC...AAG-5'\n_____________|__________________|\n_____________80_________________62\n |
58 -- 64 |
63 -- 69 |
-14.0866 kcal/mol |
6.80006 kcal/mol |
0.735636 kcal/mol |
46 65@LB@ | |@LB@5'-AUU...GUGAU CUG A UUCAU...AUG-3'@LB@ UUGGC GG UUGUUCG@LB@ ||||| :| ||:||||@LB@ AACCG UC AAUAAGC@LB@3'-CGC...AGUGC AAA UCAAC...AAG-5'@LB@ | |@LB@ 80 62@LB@@LB@@LB@Energy -6.55 kcal/mol@LB@Hybridization Energy -14.0866 kcal/mol@LB@Unfolding Energy - mRNA 6.80006 kcal/mol@LB@Unfolding Energy - sRNA 0.735636 kcal/mol@LB@@LB@Position - mRNA 47 -- 64@LB@Position - sRNA 63 -- 79@LB@Position Seed - mRNA 58 -- 64@LB@Position Seed - sRNA 63 -- 69@LB@ |
| 182 |
0.03197 |
0.5559 |
b0212 |
gloB |
-7.96 |
0.231442 |
50 -- 71 |
56 -- 75 |
hydroxyacylglutathione hydrolase |
|
_____________49_____________________72\n_____________|______________________|\n5'-UUG...AUACA_______GAACCA_________CUGGC...AGC-3'\n______________UUUUAGU______CGGGUUGAG\n______________:||||||______||:||||||\n______________GAAAUCA______GCUCAACUC\n3'-CGC...CAACC_______AUAA___________UUUGA...AAG-5'\n_____________|______________________|\n_____________76_____________________55\n |
65 -- 71 |
56 -- 62 |
-16.3693 kcal/mol |
6.6953 kcal/mol |
1.71204 kcal/mol |
49 72@LB@ | |@LB@5'-UUG...AUACA GAACCA CUGGC...AGC-3'@LB@ UUUUAGU CGGGUUGAG@LB@ :|||||| ||:||||||@LB@ GAAAUCA GCUCAACUC@LB@3'-CGC...CAACC AUAA UUUGA...AAG-5'@LB@ | |@LB@ 76 55@LB@@LB@@LB@Energy -7.96 kcal/mol@LB@Hybridization Energy -16.3693 kcal/mol@LB@Unfolding Energy - mRNA 6.6953 kcal/mol@LB@Unfolding Energy - sRNA 1.71204 kcal/mol@LB@@LB@Position - mRNA 50 -- 71@LB@Position - sRNA 56 -- 75@LB@Position Seed - mRNA 65 -- 71@LB@Position Seed - sRNA 56 -- 62@LB@ |
