| 150 |
0.02548 |
0.5485 |
b0180 |
fabZ |
-10.02 |
0.104939 |
240 -- 263 |
1 -- 24 |
(3R)-hydroxymyristol acyl carrier protein dehydratase |
|
_____________239______________________264\n_____________|________________________|\n5'-AAA...AGAUU______CUUC______A_______CCGUU...AAG-3'\n______________UUAGAA____UGCCGC_CCGUUUC\n______________|||:||____||||||_|||||||\n______________AAUUUU____ACGGCG_GGCAAAG\n3'-CGC...UUCCC______CUCC______A_______-5'\n_____________|_______________________|\n_____________25______________________1\n |
257 -- 263 |
1 -- 7 |
-23.7452 kcal/mol |
3.39044 kcal/mol |
10.3355 kcal/mol |
239 264@LB@ | |@LB@5'-AAA...AGAUU CUUC A CCGUU...AAG-3'@LB@ UUAGAA UGCCGC CCGUUUC@LB@ |||:|| |||||| |||||||@LB@ AAUUUU ACGGCG GGCAAAG@LB@3'-CGC...UUCCC CUCC A -5'@LB@ | |@LB@ 25 1@LB@@LB@@LB@Energy -10.02 kcal/mol@LB@Hybridization Energy -23.7452 kcal/mol@LB@Unfolding Energy - mRNA 3.39044 kcal/mol@LB@Unfolding Energy - sRNA 10.3355 kcal/mol@LB@@LB@Position - mRNA 240 -- 263@LB@Position - sRNA 1 -- 24@LB@Position Seed - mRNA 257 -- 263@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 119 |
0.02023 |
0.5385 |
b3579 |
yiaO |
-11.14 |
0.066893 |
104 -- 124 |
64 -- 84 |
2 3-diketo-L-gulonate-binding periplasmic protein |
|
_____________103_____________________125\n_____________|_______________________|\n5'-ACU...UUCCC______CC_______________AUUAU...AAA-3'\n______________UUACGU__UGGUUUUA__UAUUC\n______________|:||||__|||:||||__|||||\n______________AGUGCA__ACCGAAAU__AUAAG\n3'-CGC...UUUCA________________CA_____CUCAA...AAG-5'\n_____________|_______________________|\n_____________85______________________63\n |
113 -- 119 |
71 -- 77 |
-15.3214 kcal/mol |
3.60448 kcal/mol |
0.573392 kcal/mol |
103 125@LB@ | |@LB@5'-ACU...UUCCC CC AUUAU...AAA-3'@LB@ UUACGU UGGUUUUA UAUUC@LB@ |:|||| |||:|||| |||||@LB@ AGUGCA ACCGAAAU AUAAG@LB@3'-CGC...UUUCA CA CUCAA...AAG-5'@LB@ | |@LB@ 85 63@LB@@LB@@LB@Energy -11.14 kcal/mol@LB@Hybridization Energy -15.3214 kcal/mol@LB@Unfolding Energy - mRNA 3.60448 kcal/mol@LB@Unfolding Energy - sRNA 0.573392 kcal/mol@LB@@LB@Position - mRNA 104 -- 124@LB@Position - sRNA 64 -- 84@LB@Position Seed - mRNA 113 -- 119@LB@Position Seed - sRNA 71 -- 77@LB@ |
| 78 |
0.01399 |
0.5385 |
b3526 |
kdgK |
-7.99 |
0.228654 |
189 -- 197 |
80 -- 88 |
2-dehydro-3-deoxygluconokinase |
|
_____________188_______198\n_____________|_________|\n5'-CCC...AGAUC_________ACUAU...CUU-3'\n______________AGGUUCACG\n______________|:|||||||\n______________UUCAAGUGC\n3'-CGC...GCGUU_________AACCG...AAG-5'\n_____________|_________|\n_____________89________79\n |
191 -- 197 |
80 -- 86 |
-11.7911 kcal/mol |
3.29177 kcal/mol |
0.504555 kcal/mol |
188 198@LB@ | |@LB@5'-CCC...AGAUC ACUAU...CUU-3'@LB@ AGGUUCACG@LB@ |:|||||||@LB@ UUCAAGUGC@LB@3'-CGC...GCGUU AACCG...AAG-5'@LB@ | |@LB@ 89 79@LB@@LB@@LB@Energy -7.99 kcal/mol@LB@Hybridization Energy -11.7911 kcal/mol@LB@Unfolding Energy - mRNA 3.29177 kcal/mol@LB@Unfolding Energy - sRNA 0.504555 kcal/mol@LB@@LB@Position - mRNA 189 -- 197@LB@Position - sRNA 80 -- 88@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 80 -- 86@LB@ |
| 56 |
0.01109 |
0.5385 |
b0425 |
panE |
-9.95 |
0.107741 |
273 -- 289 |
74 -- 89 |
2-dehydropantoate reductase NADPH-specific |
|
_____________272_______________290\n_____________|_________________|\n5'-AUC...GUCAU________G_GC_____GCGCG...CGC-3'\n______________GAAGUUCA_G__UGGCU\n______________:|||||||_|__|||||\n______________UUUCAAGU_C__ACCGA\n3'-CGC...GGCGU________G_A______AAUCA...AAG-5'\n_____________|_________________|\n_____________90________________73\n |
274 -- 280 |
82 -- 88 |
-18.2046 kcal/mol |
7.73441 kcal/mol |
0.517373 kcal/mol |
272 290@LB@ | |@LB@5'-AUC...GUCAU G GC GCGCG...CGC-3'@LB@ GAAGUUCA G UGGCU@LB@ :||||||| | |||||@LB@ UUUCAAGU C ACCGA@LB@3'-CGC...GGCGU G A AAUCA...AAG-5'@LB@ | |@LB@ 90 73@LB@@LB@@LB@Energy -9.95 kcal/mol@LB@Hybridization Energy -18.2046 kcal/mol@LB@Unfolding Energy - mRNA 7.73441 kcal/mol@LB@Unfolding Energy - sRNA 0.517373 kcal/mol@LB@@LB@Position - mRNA 273 -- 289@LB@Position - sRNA 74 -- 89@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 82 -- 88@LB@ |
| 37 |
0.006912 |
0.5385 |
b3693 |
dgoK |
-11.15 |
0.066742 |
227 -- 259 |
71 -- 102 |
2-oxo-3-deoxygalactonate kinase |
|
_____________226________________________________260\n_____________|__________________________________|\n5'-CAG...AUUGA_________GAC___UCUG_____CC________UCAGG...CAG-3'\n______________CUGGGGAUC___CAA_____CGCG__UGGCUUUA\n______________||||:||||___|||_____|:||__||||||||\n______________GACCUCUAG___GUU_____GUGC__ACCGAAAU\n____3'-CGCCUAG_________GC____UUCAA____A_________CAAUA...AAG-5'\n_____________|__________________________________|\n_____________103________________________________70\n |
253 -- 259 |
71 -- 77 |
-30.6737 kcal/mol |
7.60256 kcal/mol |
11.9219 kcal/mol |
226 260@LB@ | |@LB@5'-CAG...AUUGA GAC UCUG CC UCAGG...CAG-3'@LB@ CUGGGGAUC CAA CGCG UGGCUUUA@LB@ ||||:|||| ||| |:|| ||||||||@LB@ GACCUCUAG GUU GUGC ACCGAAAU@LB@ 3'-CGCCUAG GC UUCAA A CAAUA...AAG-5'@LB@ | |@LB@ 103 70@LB@@LB@@LB@Energy -11.15 kcal/mol@LB@Hybridization Energy -30.6737 kcal/mol@LB@Unfolding Energy - mRNA 7.60256 kcal/mol@LB@Unfolding Energy - sRNA 11.9219 kcal/mol@LB@@LB@Position - mRNA 227 -- 259@LB@Position - sRNA 71 -- 102@LB@Position Seed - mRNA 253 -- 259@LB@Position Seed - sRNA 71 -- 77@LB@ |
| 71 |
0.01305 |
0.5385 |
b3843 |
ubiD |
-10.23 |
0.096580 |
123 -- 132 |
80 -- 89 |
3-octaprenyl-4-hydroxybenzoate decarboxylase |
|
_____________122________133\n_____________|__________|\n5'-CGC...CCGUC__________CUAAU...UGG-3'\n______________AGAGUUCACG\n______________|:||||||||\n______________UUUCAAGUGC\n3'-CGC...GGCGU__________AACCG...AAG-5'\n_____________|__________|\n_____________90_________79\n |
126 -- 132 |
80 -- 86 |
-13.04 kcal/mol |
2.30553 kcal/mol |
0.506316 kcal/mol |
122 133@LB@ | |@LB@5'-CGC...CCGUC CUAAU...UGG-3'@LB@ AGAGUUCACG@LB@ |:||||||||@LB@ UUUCAAGUGC@LB@3'-CGC...GGCGU AACCG...AAG-5'@LB@ | |@LB@ 90 79@LB@@LB@@LB@Energy -10.23 kcal/mol@LB@Hybridization Energy -13.04 kcal/mol@LB@Unfolding Energy - mRNA 2.30553 kcal/mol@LB@Unfolding Energy - sRNA 0.506316 kcal/mol@LB@@LB@Position - mRNA 123 -- 132@LB@Position - sRNA 80 -- 89@LB@Position Seed - mRNA 126 -- 132@LB@Position Seed - sRNA 80 -- 86@LB@ |
| 81 |
0.01462 |
0.5385 |
b3296 |
rpsD |
-10.19 |
0.098165 |
202 -- 218 |
60 -- 78 |
30S ribosomal subunit protein S4 |
|
_____________201_________________219\n_____________|___________________|\n5'-AAG...GAAAA____A____A_________CCUAA...AAA-3'\n______________UGGC___AG_UAUUUGGGU\n______________||||___||_||||:|:||\n______________ACCG___UC_AUAAGCUCA\n3'-CGC...GUGCA____AAA__A_________ACUCU...AAG-5'\n_____________|___________________|\n_____________79__________________59\n |
212 -- 218 |
60 -- 66 |
-14.6837 kcal/mol |
3.69927 kcal/mol |
0.797083 kcal/mol |
201 219@LB@ | |@LB@5'-AAG...GAAAA A A CCUAA...AAA-3'@LB@ UGGC AG UAUUUGGGU@LB@ |||| || ||||:|:||@LB@ ACCG UC AUAAGCUCA@LB@3'-CGC...GUGCA AAA A ACUCU...AAG-5'@LB@ | |@LB@ 79 59@LB@@LB@@LB@Energy -10.19 kcal/mol@LB@Hybridization Energy -14.6837 kcal/mol@LB@Unfolding Energy - mRNA 3.69927 kcal/mol@LB@Unfolding Energy - sRNA 0.797083 kcal/mol@LB@@LB@Position - mRNA 202 -- 218@LB@Position - sRNA 60 -- 78@LB@Position Seed - mRNA 212 -- 218@LB@Position Seed - sRNA 60 -- 66@LB@ |
| 63 |
0.01271 |
0.5385 |
b3306 |
rpsH |
-10.49 |
0.086924 |
89 -- 100 |
56 -- 67 |
30S ribosomal subunit protein S8 |
|
_____________88___________101\n_____________|____________|\n5'-AGC...CGGAA____________CCGUA...AAG-3'\n______________GUUCGGGUUGAG\n______________:||||:||||||\n______________UAAGCUCAACUC\n3'-CGC...AUCAA____________UUUGA...AAG-5'\n_____________|____________|\n_____________68___________55\n |
94 -- 100 |
56 -- 62 |
-16.8063 kcal/mol |
4.74141 kcal/mol |
1.57281 kcal/mol |
88 101@LB@ | |@LB@5'-AGC...CGGAA CCGUA...AAG-3'@LB@ GUUCGGGUUGAG@LB@ :||||:||||||@LB@ UAAGCUCAACUC@LB@3'-CGC...AUCAA UUUGA...AAG-5'@LB@ | |@LB@ 68 55@LB@@LB@@LB@Energy -10.49 kcal/mol@LB@Hybridization Energy -16.8063 kcal/mol@LB@Unfolding Energy - mRNA 4.74141 kcal/mol@LB@Unfolding Energy - sRNA 1.57281 kcal/mol@LB@@LB@Position - mRNA 89 -- 100@LB@Position - sRNA 56 -- 67@LB@Position Seed - mRNA 94 -- 100@LB@Position Seed - sRNA 56 -- 62@LB@ |
| 4 |
0.0006326 |
0.5173 |
b3230 |
rpsI |
-11.95 |
0.048152 |
221 -- 251 |
74 -- 108 |
30S ribosomal subunit protein S9 |
|
_____________220_________________________________252\n_____________|___________________________________|\n5'-GUG...UACUA___CA_____UCG________________CA____CGCGU...GUU-3'\n______________CGG___CUGG____CCGCAAAAGUUC_CG___GCU\n______________|||___||||____||||||||||||_||___|||\n______________GCC___GACC____GGCGUUUUCAAG_GC___CGA\n__________3'-C___UAG____UCUA____________U__AAC___AAUCA...AAG-5'\n_____________|___________________________________|\n_____________109_________________________________73\n |
238 -- 244 |
83 -- 89 |
-33.5849 kcal/mol |
9.75151 kcal/mol |
11.8795 kcal/mol |
220 252@LB@ | |@LB@5'-GUG...UACUA CA UCG CA CGCGU...GUU-3'@LB@ CGG CUGG CCGCAAAAGUUC CG GCU@LB@ ||| |||| |||||||||||| || |||@LB@ GCC GACC GGCGUUUUCAAG GC CGA@LB@ 3'-C UAG UCUA U AAC AAUCA...AAG-5'@LB@ | |@LB@ 109 73@LB@@LB@@LB@Energy -11.95 kcal/mol@LB@Hybridization Energy -33.5849 kcal/mol@LB@Unfolding Energy - mRNA 9.75151 kcal/mol@LB@Unfolding Energy - sRNA 11.8795 kcal/mol@LB@@LB@Position - mRNA 221 -- 251@LB@Position - sRNA 74 -- 108@LB@Position Seed - mRNA 238 -- 244@LB@Position Seed - sRNA 83 -- 89@LB@ |
| 115 |
0.01932 |
0.5385 |
b3475 |
acpT |
-9.48 |
0.130030 |
187 -- 194 |
75 -- 82 |
4'-phosphopantetheinyl transferase |
|
_____________186______195\n_____________|________|\n5'-GGG...AUUAA________CCUGA...GCU-3'\n______________ACGUUGGC\n______________||||||||\n______________UGCAACCG\n3'-CGC...UCAAG________AAAUC...AAG-5'\n_____________|________|\n_____________83_______74\n |
188 -- 194 |
75 -- 81 |
-13.2305 kcal/mol |
3.41608 kcal/mol |
0.339284 kcal/mol |
186 195@LB@ | |@LB@5'-GGG...AUUAA CCUGA...GCU-3'@LB@ ACGUUGGC@LB@ ||||||||@LB@ UGCAACCG@LB@3'-CGC...UCAAG AAAUC...AAG-5'@LB@ | |@LB@ 83 74@LB@@LB@@LB@Energy -9.48 kcal/mol@LB@Hybridization Energy -13.2305 kcal/mol@LB@Unfolding Energy - mRNA 3.41608 kcal/mol@LB@Unfolding Energy - sRNA 0.339284 kcal/mol@LB@@LB@Position - mRNA 187 -- 194@LB@Position - sRNA 75 -- 82@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 75 -- 81@LB@ |
