| 148 |
0.01733 |
0.3828 |
b1760 |
ynjH |
-7.42 |
0.362448 |
2 -- 64 |
11 -- 71 |
DUF1496 family protein |
|
_____________1________________________________________________________________65\n_____________|________________________________________________________________|\n__________5'-U_______UUUAU____U___CUUU______U_______UAUACCAUCAAGAA____________CAAGA...AAG-3'\n______________UAUGUUG_____GUCA_GUG____UGCAGU__UUCGAC______________UGUGACGGUAAG\n______________|||||||_____:|||_|||____||||:|__::|:||______________||||||::|||:\n______________AUACAAC_____UAGU_CAC____ACGUUA__GGGUUG______________ACACUGUUAUUU\n3'-UUU...AAAAU_______CUUU_________CGUU______CC______UCUUUUAUUUUAG_____________CCGUA...UUG-5'\n_____________|________________________________________________________________|\n_____________72_______________________________________________________________10\n |
58 -- 64 |
11 -- 17 |
-35.6179 kcal/mol |
16.0903 kcal/mol |
12.1045 kcal/mol |
1 65@LB@ | |@LB@ 5'-U UUUAU U CUUU U UAUACCAUCAAGAA CAAGA...AAG-3'@LB@ UAUGUUG GUCA GUG UGCAGU UUCGAC UGUGACGGUAAG@LB@ ||||||| :||| ||| ||||:| ::|:|| ||||||::|||:@LB@ AUACAAC UAGU CAC ACGUUA GGGUUG ACACUGUUAUUU@LB@3'-UUU...AAAAU CUUU CGUU CC UCUUUUAUUUUAG CCGUA...UUG-5'@LB@ | |@LB@ 72 10@LB@@LB@@LB@Energy -7.42 kcal/mol@LB@Hybridization Energy -35.6179 kcal/mol@LB@Unfolding Energy - mRNA 16.0903 kcal/mol@LB@Unfolding Energy - sRNA 12.1045 kcal/mol@LB@@LB@Position - mRNA 2 -- 64@LB@Position - sRNA 11 -- 71@LB@Position Seed - mRNA 58 -- 64@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 112 |
0.0105 |
0.3154 |
b2136 |
yohD |
-14.01 |
0.014269 |
227 -- 295 |
6 -- 72 |
DedA family inner membrane protein |
|
_____________226_____________________________________________________________________296\n_____________|_______________________________________________________________________|\n5'-GAU...UCACA_____GUUAUGCCG__C____________A____________________C_____UUUGCUG________UGCGG-3'\n______________AUAUG_________CG_UGGUGAU_CGGU_GCCUGGCGGAAGGUGAAA_C_GUGAC_______GGAGGCGU\n______________|||||_________|:_|||::||_|::|_|||:::|:|||::|:|||_|_|||||_______::||||:|\n______________UAUAC_________GU_ACCGUUA_GUUA_CGGGUUGUCUUUUAUUUU_G_CACUG_______UUUCCGUA\n3'-UUU...AAAAA_____AACCUUUUA__C_______C____C__________________A_A_____UUA____________UAUUG-5'\n_____________|_______________________________________________________________________|\n_____________73______________________________________________________________________5\n |
289 -- 295 |
6 -- 12 |
-51.7055 kcal/mol |
25.533 kcal/mol |
12.1614 kcal/mol |
226 296@LB@ | |@LB@5'-GAU...UCACA GUUAUGCCG C A C UUUGCUG UGCGG-3'@LB@ AUAUG CG UGGUGAU CGGU GCCUGGCGGAAGGUGAAA C GUGAC GGAGGCGU@LB@ ||||| |: |||::|| |::| |||:::|:|||::|:||| | ||||| ::||||:|@LB@ UAUAC GU ACCGUUA GUUA CGGGUUGUCUUUUAUUUU G CACUG UUUCCGUA@LB@3'-UUU...AAAAA AACCUUUUA C C C A A UUA UAUUG-5'@LB@ | |@LB@ 73 5@LB@@LB@@LB@Energy -14.01 kcal/mol@LB@Hybridization Energy -51.7055 kcal/mol@LB@Unfolding Energy - mRNA 25.533 kcal/mol@LB@Unfolding Energy - sRNA 12.1614 kcal/mol@LB@@LB@Position - mRNA 227 -- 295@LB@Position - sRNA 6 -- 72@LB@Position Seed - mRNA 289 -- 295@LB@Position Seed - sRNA 6 -- 12@LB@ |
| 132 |
0.0144 |
0.3654 |
b2381 |
ypdB |
-7.98 |
0.293473 |
18 -- 39 |
11 -- 32 |
response regulator activating yhjX; pyruvate-responsive YpdAB two-component system |
|
_____________17_____________________40\n_____________|______________________|\n5'-AUU...GAAGC_________GCCG_________AUUGG...ACG-3'\n______________GAAUGAAAU____GGCAAUAAA\n______________:|||:||||____|:|||||||\n______________UUUAUUUUA____CUGUUAUUU\n3'-UUU...UGUCU_________GACA_________CCGUA...UUG-5'\n_____________|______________________|\n_____________33_____________________10\n |
33 -- 39 |
11 -- 17 |
-14.9693 kcal/mol |
2.07375 kcal/mol |
4.91579 kcal/mol |
17 40@LB@ | |@LB@5'-AUU...GAAGC GCCG AUUGG...ACG-3'@LB@ GAAUGAAAU GGCAAUAAA@LB@ :|||:|||| |:|||||||@LB@ UUUAUUUUA CUGUUAUUU@LB@3'-UUU...UGUCU GACA CCGUA...UUG-5'@LB@ | |@LB@ 33 10@LB@@LB@@LB@Energy -7.98 kcal/mol@LB@Hybridization Energy -14.9693 kcal/mol@LB@Unfolding Energy - mRNA 2.07375 kcal/mol@LB@Unfolding Energy - sRNA 4.91579 kcal/mol@LB@@LB@Position - mRNA 18 -- 39@LB@Position - sRNA 11 -- 32@LB@Position Seed - mRNA 33 -- 39@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 153 |
0.01791 |
0.3828 |
b2384 |
ypdE |
-7.27 |
0.383330 |
233 -- 249 |
39 -- 54 |
aminopeptidase |
b4305 b3898 |
_____________232_______________250\n_____________|_________________|\n5'-AUU...AGCGA____G_______C____CCUCG...UGC-3'\n______________GGCA_AUGCGAU_GCCU\n______________||||_||||:||_|||:\n______________CCGU_UACGUUA_CGGG\n3'-UUU...AGUCA____________C____UUGUC...UUG-5'\n_____________|_________________|\n_____________55________________38\n |
238 -- 244 |
44 -- 50 |
-20.1031 kcal/mol |
8.07514 kcal/mol |
4.76022 kcal/mol |
232 250@LB@ | |@LB@5'-AUU...AGCGA G C CCUCG...UGC-3'@LB@ GGCA AUGCGAU GCCU@LB@ |||| ||||:|| |||:@LB@ CCGU UACGUUA CGGG@LB@3'-UUU...AGUCA C UUGUC...UUG-5'@LB@ | |@LB@ 55 38@LB@@LB@@LB@Energy -7.27 kcal/mol@LB@Hybridization Energy -20.1031 kcal/mol@LB@Unfolding Energy - mRNA 8.07514 kcal/mol@LB@Unfolding Energy - sRNA 4.76022 kcal/mol@LB@@LB@Position - mRNA 233 -- 249@LB@Position - sRNA 39 -- 54@LB@Position Seed - mRNA 238 -- 244@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 41 |
0.002667 |
0.2088 |
b2475 |
ypfJ |
-12.17 |
0.040379 |
232 -- 266 |
38 -- 70 |
putative neutral zinc metallopeptidase |
|
_____________231___________________________________267\n_____________|_____________________________________|\n5'-GUC...UGACA_______________GC____CA__UCU_________UCUAU...GCG-3'\n______________AUGUU_GAAGA_CAG__GCAA__GC___GGUGGUCCA\n______________|||||_|||:|_|||__||||__||___::|||:|||\n______________UACAA_CUUUU_GUC__CGUU__CG___UUACCGGGU\n3'-UUU...AAAUA_____C_____A___AC____A_______________UGUCU...UUG-5'\n_____________|_____________________________________|\n_____________71____________________________________37\n |
260 -- 266 |
38 -- 44 |
-27.4905 kcal/mol |
8.02084 kcal/mol |
7.29667 kcal/mol |
231 267@LB@ | |@LB@5'-GUC...UGACA GC CA UCU UCUAU...GCG-3'@LB@ AUGUU GAAGA CAG GCAA GC GGUGGUCCA@LB@ ||||| |||:| ||| |||| || ::|||:|||@LB@ UACAA CUUUU GUC CGUU CG UUACCGGGU@LB@3'-UUU...AAAUA C A AC A UGUCU...UUG-5'@LB@ | |@LB@ 71 37@LB@@LB@@LB@Energy -12.17 kcal/mol@LB@Hybridization Energy -27.4905 kcal/mol@LB@Unfolding Energy - mRNA 8.02084 kcal/mol@LB@Unfolding Energy - sRNA 7.29667 kcal/mol@LB@@LB@Position - mRNA 232 -- 266@LB@Position - sRNA 38 -- 70@LB@Position Seed - mRNA 260 -- 266@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 52 |
0.003856 |
0.237 |
b2844 |
yqeF |
-12.45 |
0.034706 |
43 -- 109 |
1 -- 67 |
short chain acyltransferase |
|
_____________42______________________________________________________________________110\n_____________|_______________________________________________________________________|\n5'-CCA...CUCUA____U__________________A_____U___U_CC___UAU____C____UGCUGCUC________UU_CUUUG...UCG-3'\n______________UUGG_GGGUUAGUGGU__UGCAA___CCU_ACG_G__AGU___GUCU_UGAC________AGGCAUAU__C\n______________||||_:::|:|||||:__|||||___||:_||:_|__|:|___:|||_||||________||||||||__|\n______________AACC_UUUAGUCACCG__ACGUU___GGG_UGU_C__UUA___UAGA_ACUG________UCCGUAUA__G\n3'-UUU...UAUAC____U___________UU_____ACC___U_____UU___UUU____C____UUAUU___________UU_-5'\n_____________|______________________________________________________________________|\n_____________68_____________________________________________________________________1\n |
100 -- 106 |
4 -- 10 |
-44.1841 kcal/mol |
19.5714 kcal/mol |
12.1612 kcal/mol |
42 110@LB@ | |@LB@5'-CCA...CUCUA U A U U CC UAU C UGCUGCUC UU CUUUG...UCG-3'@LB@ UUGG GGGUUAGUGGU UGCAA CCU ACG G AGU GUCU UGAC AGGCAUAU C@LB@ |||| :::|:|||||: ||||| ||: ||: | |:| :||| |||| |||||||| |@LB@ AACC UUUAGUCACCG ACGUU GGG UGU C UUA UAGA ACUG UCCGUAUA G@LB@3'-UUU...UAUAC U UU ACC U UU UUU C UUAUU UU -5'@LB@ | |@LB@ 68 1@LB@@LB@@LB@Energy -12.45 kcal/mol@LB@Hybridization Energy -44.1841 kcal/mol@LB@Unfolding Energy - mRNA 19.5714 kcal/mol@LB@Unfolding Energy - sRNA 12.1612 kcal/mol@LB@@LB@Position - mRNA 43 -- 109@LB@Position - sRNA 1 -- 67@LB@Position Seed - mRNA 100 -- 106@LB@Position Seed - sRNA 4 -- 10@LB@ |
| 4 |
6.145e-05 |
0.05167 |
b4217 |
ytfK |
-14.33 |
0.011783 |
150 -- 205 |
11 -- 68 |
DUF1107 family protein |
|
_____________149________________________________________________________________206\n_____________|__________________________________________________________________|\n5'-GAA...UAAUA______CC___________CC___CA___GUAAUAC______________________________AAUUU...AAU-3'\n______________GUUGGG__GAUU_GUGGCA__GCA__GGC_______UCAGCAGGAGAUA_________ACAAUGAA\n______________|||||:__:||:_||||||__|||__|||_______:||:|||:|:|||_________|||||:||\n______________CAACCU__UUAG_CACCGU__CGU__CCG_______GGUUGUCUUUUAU_________UGUUAUUU\n3'-UUU...AUAUA______U_____U______UA___UA_______________________UUUAGACAC________CCGUA...UUG-5'\n_____________|__________________________________________________________________|\n_____________69_________________________________________________________________10\n |
199 -- 205 |
11 -- 17 |
-43.2853 kcal/mol |
16.8726 kcal/mol |
12.0809 kcal/mol |
149 206@LB@ | |@LB@5'-GAA...UAAUA CC CC CA GUAAUAC AAUUU...AAU-3'@LB@ GUUGGG GAUU GUGGCA GCA GGC UCAGCAGGAGAUA ACAAUGAA@LB@ |||||: :||: |||||| ||| ||| :||:|||:|:||| |||||:||@LB@ CAACCU UUAG CACCGU CGU CCG GGUUGUCUUUUAU UGUUAUUU@LB@3'-UUU...AUAUA U U UA UA UUUAGACAC CCGUA...UUG-5'@LB@ | |@LB@ 69 10@LB@@LB@@LB@Energy -14.33 kcal/mol@LB@Hybridization Energy -43.2853 kcal/mol@LB@Unfolding Energy - mRNA 16.8726 kcal/mol@LB@Unfolding Energy - sRNA 12.0809 kcal/mol@LB@@LB@Position - mRNA 150 -- 205@LB@Position - sRNA 11 -- 68@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 53 |
0.003903 |
0.237 |
b0946 |
zapC |
-7.74 |
0.322468 |
177 -- 206 |
45 -- 76 |
FtsZ stabilizer |
|
_____________176_________________________________207\n_____________|___________________________________|\n5'-AUU...UGCGG_______GG__AG______________A_______AUUAA...GUU-3'\n______________UUUUAUA__GU__GGGAGA_____GGC_GAUGCGA\n______________|||||||__||__||:|:|_____|||_:||||:|\n______________AAAAUAU__CA__CCUUUU_____CCG_UUACGUU\n3'-UUU...ACAGA_______A___A_______AGUCA___________ACCGG...UUG-5'\n_____________|___________________________________|\n_____________77__________________________________44\n |
200 -- 206 |
45 -- 51 |
-19.1898 kcal/mol |
6.23804 kcal/mol |
5.21532 kcal/mol |
176 207@LB@ | |@LB@5'-AUU...UGCGG GG AG A AUUAA...GUU-3'@LB@ UUUUAUA GU GGGAGA GGC GAUGCGA@LB@ ||||||| || ||:|:| ||| :||||:|@LB@ AAAAUAU CA CCUUUU CCG UUACGUU@LB@3'-UUU...ACAGA A A AGUCA ACCGG...UUG-5'@LB@ | |@LB@ 77 44@LB@@LB@@LB@Energy -7.74 kcal/mol@LB@Hybridization Energy -19.1898 kcal/mol@LB@Unfolding Energy - mRNA 6.23804 kcal/mol@LB@Unfolding Energy - sRNA 5.21532 kcal/mol@LB@@LB@Position - mRNA 177 -- 206@LB@Position - sRNA 45 -- 76@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 45 -- 51@LB@ |
| 150 |
0.01784 |
0.3828 |
b2412 |
zipA |
-13.80 |
0.016156 |
169 -- 198 |
28 -- 57 |
FtsZ stabilizer |
|
_____________168____________________________199\n_____________|______________________________|\n5'-CAG...GCCGU________G___UUA_AA____________UAAUG...CUU-3'\n______________GGUGGCAA_GUG___G__CAACAGAGAAUA\n______________:|||||||_|::___|__|||||||:||||\n______________UCACCGUU_CGU___C__GUUGUCUUUUAU\n3'-UUU...UUUAG________A___UAC_GG____________UUUAG...UUG-5'\n_____________|______________________________|\n_____________58_____________________________27\n |
189 -- 195 |
31 -- 37 |
-29.7049 kcal/mol |
6.01867 kcal/mol |
9.88595 kcal/mol |
168 199@LB@ | |@LB@5'-CAG...GCCGU G UUA AA UAAUG...CUU-3'@LB@ GGUGGCAA GUG G CAACAGAGAAUA@LB@ :||||||| |:: | |||||||:||||@LB@ UCACCGUU CGU C GUUGUCUUUUAU@LB@3'-UUU...UUUAG A UAC GG UUUAG...UUG-5'@LB@ | |@LB@ 58 27@LB@@LB@@LB@Energy -13.80 kcal/mol@LB@Hybridization Energy -29.7049 kcal/mol@LB@Unfolding Energy - mRNA 6.01867 kcal/mol@LB@Unfolding Energy - sRNA 9.88595 kcal/mol@LB@@LB@Position - mRNA 169 -- 198@LB@Position - sRNA 28 -- 57@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 31 -- 37@LB@ |
| 90 |
0.007755 |
0.2889 |
b1852 |
zwf |
-12.23 |
0.039232 |
191 -- 223 |
38 -- 65 |
glucose-6-phosphate 1-dehydrogenase |
|
_____________190_______________________________224\n_____________|_________________________________|\n5'-UCA...CUUAA_______G_CA_______AAC____ACA_____GGCCU...UGG-3'\n______________GGAGAAU_A__UGGCGGU___GCAA___GCCCA\n______________|||:|||_|__||||::|___||||___|||||\n______________CCUUUUA_U__ACCGUUA___CGUU___CGGGU\n3'-UUU...UACAA_______G_C_______________AC______UGUCU...UUG-5'\n_____________|_________________________________|\n_____________66________________________________37\n |
202 -- 208 |
49 -- 55 |
-27.1425 kcal/mol |
8.24293 kcal/mol |
6.67322 kcal/mol |
190 224@LB@ | |@LB@5'-UCA...CUUAA G CA AAC ACA GGCCU...UGG-3'@LB@ GGAGAAU A UGGCGGU GCAA GCCCA@LB@ |||:||| | ||||::| |||| |||||@LB@ CCUUUUA U ACCGUUA CGUU CGGGU@LB@3'-UUU...UACAA G C AC UGUCU...UUG-5'@LB@ | |@LB@ 66 37@LB@@LB@@LB@Energy -12.23 kcal/mol@LB@Hybridization Energy -27.1425 kcal/mol@LB@Unfolding Energy - mRNA 8.24293 kcal/mol@LB@Unfolding Energy - sRNA 6.67322 kcal/mol@LB@@LB@Position - mRNA 191 -- 223@LB@Position - sRNA 38 -- 65@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 49 -- 55@LB@ |
