| 75 |
0.002405 |
0.1242 |
bsu01600 |
ybbA |
-13.26 |
0.075734 |
128 -- 177 |
34 -- 77 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 12354229 2974033; Product type pe: enzyme' |
|
_____________127______________________________________________178\n_____________|________________________________________________|\n5'-UCA...CGCAG___UC_________________________GGA_______________AUAUC...UUU-3'\n______________GCA__AUUUUGGCG_________AUCC_UC____GUUCCUUAUUUCUU\n______________|||__||:|||||:_________|:||_||____:||||::|||||||\n______________CGU__UAGAACCGU_________UGGG_AG____UAAGGGGUAAAGAA\n3'-AUU...AGCAA______________UUGUUAGCA____U__AGAA______________ACUUU...CAA-5'\n_____________|________________________________________________|\n_____________78_______________________________________________33\n |
158 -- 164 |
32 -- 38 |
-31.1473 kcal/mol |
6.80918 kcal/mol |
13.8943 kcal/mol |
127 178@LB@ | |@LB@5'-UCA...CGCAG UC GGA AUAUC...UUU-3'@LB@ GCA AUUUUGGCG AUCC UC GUUCCUUAUUUCUU@LB@ ||| ||:|||||: |:|| || :||||::|||||||@LB@ CGU UAGAACCGU UGGG AG UAAGGGGUAAAGAA@LB@3'-AUU...AGCAA UUGUUAGCA U AGAA ACUUU...CAA-5'@LB@ | |@LB@ 78 33@LB@@LB@@LB@Energy -13.26 kcal/mol@LB@Hybridization Energy -31.1473 kcal/mol@LB@Unfolding Energy - mRNA 6.80918 kcal/mol@LB@Unfolding Energy - sRNA 13.8943 kcal/mol@LB@@LB@Position - mRNA 128 -- 177@LB@Position - sRNA 34 -- 77@LB@Position Seed - mRNA 158 -- 164@LB@Position Seed - sRNA 32 -- 38@LB@ |
| 17 |
0.0005293 |
0.1011 |
bsu19390 |
yojN |
-14.35 |
0.045317 |
34 -- 87 |
125 -- 170 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15491156; Product type pe : enzyme' |
|
_____________33_______________________________________________________88\n_____________|________________________________________________________|\n5'-AAC...UGCAU_____A_____G____AGC_____AUUAUC_____AAC___AA_____________GUGCG...CUA-3'\n______________UUAUU_UUCAU_AACA___GGACG______UGACA____CC__GCGGCAA_UUCCG\n______________|||:|_|||||_||||___||||:______|||||____||__||:||||_||||:\n______________AAUGA_AAGUA_UUGU___CCUGU______ACUGU____GG__CGUCGUU_AAGGU\n3'-AUU...AAAAA_____G_____G____________A__________AACA___________C_____AUAUU...CAA-5'\n_____________|________________________________________________________|\n_____________171______________________________________________________124\n |
76 -- 82 |
131 -- 137 |
-33.3587 kcal/mol |
7.78061 kcal/mol |
10.3745 kcal/mol |
33 88@LB@ | |@LB@5'-AAC...UGCAU A G AGC AUUAUC AAC AA GUGCG...CUA-3'@LB@ UUAUU UUCAU AACA GGACG UGACA CC GCGGCAA UUCCG@LB@ |||:| ||||| |||| ||||: ||||| || ||:|||| ||||:@LB@ AAUGA AAGUA UUGU CCUGU ACUGU GG CGUCGUU AAGGU@LB@3'-AUU...AAAAA G G A AACA C AUAUU...CAA-5'@LB@ | |@LB@ 171 124@LB@@LB@@LB@Energy -14.35 kcal/mol@LB@Hybridization Energy -33.3587 kcal/mol@LB@Unfolding Energy - mRNA 7.78061 kcal/mol@LB@Unfolding Energy - sRNA 10.3745 kcal/mol@LB@@LB@Position - mRNA 34 -- 87@LB@Position - sRNA 125 -- 170@LB@Position Seed - mRNA 76 -- 82@LB@Position Seed - sRNA 131 -- 137@LB@ |
| 13 |
0.0004662 |
0.1011 |
bsu39950 |
yxaJ |
-7.42 |
0.718209 |
218 -- 252 |
31 -- 81 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15743949 15849754 16850406; Product type pm: membrane component' |
|
_____________217_________________________________________253\n_____________|___________________________________________|\n5'-CAU...AAUAG___G______A__A_____________________GC______UUUUU...CGG-3'\n______________CGU_GCGAUC_UG_CAA__________CCAUUUCU__GUUUCU\n______________|||_||:|||_||_|||__________||||:|||__:||:|:\n______________GCA_CGUUAG_AC_GUU__________GGUAGAGA__UAAGGG\n3'-AUU...CCGAA___A______A__C___UGUUAGCAUG________A_______GUAAA...CAA-5'\n_____________|___________________________________________|\n_____________82__________________________________________30\n |
236 -- 242 |
47 -- 53 |
-25.2058 kcal/mol |
7.74885 kcal/mol |
10.909 kcal/mol |
217 253@LB@ | |@LB@5'-CAU...AAUAG G A A GC UUUUU...CGG-3'@LB@ CGU GCGAUC UG CAA CCAUUUCU GUUUCU@LB@ ||| ||:||| || ||| ||||:||| :||:|:@LB@ GCA CGUUAG AC GUU GGUAGAGA UAAGGG@LB@3'-AUU...CCGAA A A C UGUUAGCAUG A GUAAA...CAA-5'@LB@ | |@LB@ 82 30@LB@@LB@@LB@Energy -7.42 kcal/mol@LB@Hybridization Energy -25.2058 kcal/mol@LB@Unfolding Energy - mRNA 7.74885 kcal/mol@LB@Unfolding Energy - sRNA 10.909 kcal/mol@LB@@LB@Position - mRNA 218 -- 252@LB@Position - sRNA 31 -- 81@LB@Position Seed - mRNA 236 -- 242@LB@Position Seed - sRNA 47 -- 53@LB@ |
| 8 |
0.0001871 |
0.08823 |
bsu22860 |
yphA |
-19.72 |
0.003251 |
3 -- 123 |
37 -- 178 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
|
_____________2_______________________________________________________________________________________________________124\n_____________|_______________________________________________________________________________________________________|\n5'-UCG...AAGGC________CCG______________________AC_G__C_______GAUUC______________AAGCUUUGAGUUUUU________CUGUCUU_______GAUCA...UUA-3'\n______________UUGUCGCU___UCA_________UAGUGAAUGG__U_GU_GCGAUCU_____GAC__UC_UGCCUG_______________UCUCUUGU_______UUCCCAU\n______________|||||:||___|||_________||:|||||||__|_||_||:||||_____:||__||_|:||::_______________||||||:|_______|:|||||\n______________AACAGUGA___AGU_________AUUACUUACC__A_CA_CGUUAGA_____UUG__AG_AUGGGU_______________AGAGAAUA_______AGGGGUA\n3'-AUU...AUUAC________AAG___AGAAGUUUC__________GA_G__A_______ACCGU___UU__C___________________________________________AAGAA...CAA-5'\n_____________|_______________________________________________________________________________________________________|\n_____________179_____________________________________________________________________________________________________36\n |
117 -- 123 |
37 -- 43 |
-53.1639 kcal/mol |
19.1133 kcal/mol |
22.4377 kcal/mol |
2 124@LB@ | |@LB@5'-UCG...AAGGC CCG AC G C GAUUC AAGCUUUGAGUUUUU CUGUCUU GAUCA...UUA-3'@LB@ UUGUCGCU UCA UAGUGAAUGG U GU GCGAUCU GAC UC UGCCUG UCUCUUGU UUCCCAU@LB@ |||||:|| ||| ||:||||||| | || ||:|||| :|| || |:||:: ||||||:| |:|||||@LB@ AACAGUGA AGU AUUACUUACC A CA CGUUAGA UUG AG AUGGGU AGAGAAUA AGGGGUA@LB@3'-AUU...AUUAC AAG AGAAGUUUC GA G A ACCGU UU C AAGAA...CAA-5'@LB@ | |@LB@ 179 36@LB@@LB@@LB@Energy -19.72 kcal/mol@LB@Hybridization Energy -53.1639 kcal/mol@LB@Unfolding Energy - mRNA 19.1133 kcal/mol@LB@Unfolding Energy - sRNA 22.4377 kcal/mol@LB@@LB@Position - mRNA 3 -- 123@LB@Position - sRNA 37 -- 178@LB@Position Seed - mRNA 117 -- 123@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 10 |
0.0002277 |
0.08823 |
bsu05690 |
ydhB |
-21.23 |
0.001523 |
113 -- 150 |
136 -- 182 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
bsu12400 |
_____________112_______________________________151\n_____________|_________________________________|\n5'-CAU...UGUUU__________________C______ACC_____CAGAA...UCC-3'\n______________UUCUUCGUCAAUAGGACA____CAU___UCCGC\n______________:|||||:||||:||||||____|||___|||||\n______________GAGAAGUAGUUGUCCUGU____GUA___AGGCG\n3'-AUU...AAAAU__________________AACU___AC______UCGUU...CAA-5'\n_____________|_________________________________|\n_____________183_______________________________135\n |
132 -- 138 |
150 -- 156 |
-33.3473 kcal/mol |
6.29637 kcal/mol |
7.50175 kcal/mol |
112 151@LB@ | |@LB@5'-CAU...UGUUU C ACC CAGAA...UCC-3'@LB@ UUCUUCGUCAAUAGGACA CAU UCCGC@LB@ :|||||:||||:|||||| ||| |||||@LB@ GAGAAGUAGUUGUCCUGU GUA AGGCG@LB@3'-AUU...AAAAU AACU AC UCGUU...CAA-5'@LB@ | |@LB@ 183 135@LB@@LB@@LB@Energy -21.23 kcal/mol@LB@Hybridization Energy -33.3473 kcal/mol@LB@Unfolding Energy - mRNA 6.29637 kcal/mol@LB@Unfolding Energy - sRNA 7.50175 kcal/mol@LB@@LB@Position - mRNA 113 -- 150@LB@Position - sRNA 136 -- 182@LB@Position Seed - mRNA 132 -- 138@LB@Position Seed - sRNA 150 -- 156@LB@ |
| 118 |
0.005364 |
0.1741 |
bsu21980 |
ypdP |
-14.81 |
0.036422 |
190 -- 236 |
72 -- 112 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
|
_____________189_______________________________________________237\n_____________|_________________________________________________|\n5'-AAC...AGGAA_____________GUUUAAUAAUUC__UU___________U________AUUCA...GGA-3'\n______________GCUUUUUCAUCUU____________GU__UGGAU__CUUU_UUGCGAUC\n______________:||||:|||||||____________||__||:||__|||:_||||:|||\n______________UGAAAGAGUAGAA____________CA__ACUUA__GAAG_AACGUUAG\n3'-AUU...AACAG_____________GUUU__________UU_____CC____C________AACCG...CAA-5'\n_____________|_________________________________________________|\n_____________113_______________________________________________71\n |
230 -- 236 |
72 -- 78 |
-29.9578 kcal/mol |
5.88063 kcal/mol |
12.3236 kcal/mol |
189 237@LB@ | |@LB@5'-AAC...AGGAA GUUUAAUAAUUC UU U AUUCA...GGA-3'@LB@ GCUUUUUCAUCUU GU UGGAU CUUU UUGCGAUC@LB@ :||||:||||||| || ||:|| |||: ||||:|||@LB@ UGAAAGAGUAGAA CA ACUUA GAAG AACGUUAG@LB@3'-AUU...AACAG GUUU UU CC C AACCG...CAA-5'@LB@ | |@LB@ 113 71@LB@@LB@@LB@Energy -14.81 kcal/mol@LB@Hybridization Energy -29.9578 kcal/mol@LB@Unfolding Energy - mRNA 5.88063 kcal/mol@LB@Unfolding Energy - sRNA 12.3236 kcal/mol@LB@@LB@Position - mRNA 190 -- 236@LB@Position - sRNA 72 -- 112@LB@Position Seed - mRNA 230 -- 236@LB@Position Seed - sRNA 72 -- 78@LB@ |
| 135 |
0.00631 |
0.1741 |
bsu31510 |
yufK |
-14.38 |
0.044651 |
233 -- 280 |
42 -- 85 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
|
_____________232________________________________________________281\n_____________|__________________________________________________|\n5'-UGC...UUUCC___GA_________CU___UUUU___U____CCUU_________AAC___ACUUU...UGC-3'\n______________GCU___UUGCGAUC___GC____UAG_UCGU____AUCCAUCUC___UUC\n______________|||___||||:|||___||____:|:_||||____|:|||||||___|||\n______________CGA___AACGUUAG___CG____GUU_AGCA____UGGGUAGAG___AAG\n3'-AUU...CUUAC___AGC________AAC__UUU______________________AAU___GGGUA...CAA-5'\n_____________|__________________________________________________|\n_____________86_________________________________________________41\n |
268 -- 274 |
48 -- 54 |
-29.5205 kcal/mol |
6.02241 kcal/mol |
9.1918 kcal/mol |
232 281@LB@ | |@LB@5'-UGC...UUUCC GA CU UUUU U CCUU AAC ACUUU...UGC-3'@LB@ GCU UUGCGAUC GC UAG UCGU AUCCAUCUC UUC@LB@ ||| ||||:||| || :|: |||| |:||||||| |||@LB@ CGA AACGUUAG CG GUU AGCA UGGGUAGAG AAG@LB@3'-AUU...CUUAC AGC AAC UUU AAU GGGUA...CAA-5'@LB@ | |@LB@ 86 41@LB@@LB@@LB@Energy -14.38 kcal/mol@LB@Hybridization Energy -29.5205 kcal/mol@LB@Unfolding Energy - mRNA 6.02241 kcal/mol@LB@Unfolding Energy - sRNA 9.1918 kcal/mol@LB@@LB@Position - mRNA 233 -- 280@LB@Position - sRNA 42 -- 85@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 142 |
0.006636 |
0.1741 |
bsu22510 |
ypjC |
-12.74 |
0.096342 |
122 -- 155 |
156 -- 190 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
|
_____________121_____________________________________________________________________________156\n_____________|_______________________________________________________________________________|\n5'-UAA...UCAUC_____A___GUUAGCUAAUU___AU___U______AA_____A_____C_____________C____UU__________CACUA...UGG-3'\n______________CUCUU_CAU___________CAG__ACG_UUGACA__UGUUU__AGCA_GUU________UG_UGUU__CUUUUUCAUC\n______________|||||_|||___________|||__||:_||||||__|||::__||||_|||________||_|||:__||||:|||||\n______________GAGAA_GUA___________GUC__UGU_AACUGU__ACAGG__UCGU_CAA________AC_ACAG__GAAAGAGUAG\n3'-AUU...AAAAU_________GUU___________C___________A______CG____U___GGUAUAUU__A____U___________AAGUU...CAA-5'\n_____________|_______________________________________________________________________________|\n_____________191_____________________________________________________________________________155\n |
146 -- 152 |
102 -- 108 |
-35.2093 kcal/mol |
10.3676 kcal/mol |
14.8184 kcal/mol |
121 156@LB@ | |@LB@5'-UAA...UCAUC A GUUAGCUAAUU AU U AA A C C UU CACUA...UGG-3'@LB@ CUCUU CAU CAG ACG UUGACA UGUUU AGCA GUU UG UGUU CUUUUUCAUC@LB@ ||||| ||| ||| ||: |||||| |||:: |||| ||| || |||: ||||:|||||@LB@ GAGAA GUA GUC UGU AACUGU ACAGG UCGU CAA AC ACAG GAAAGAGUAG@LB@3'-AUU...AAAAU GUU C A CG U GGUAUAUU A U AAGUU...CAA-5'@LB@ | |@LB@ 191 155@LB@@LB@@LB@Energy -12.74 kcal/mol@LB@Hybridization Energy -35.2093 kcal/mol@LB@Unfolding Energy - mRNA 10.3676 kcal/mol@LB@Unfolding Energy - sRNA 14.8184 kcal/mol@LB@@LB@Position - mRNA 122 -- 155@LB@Position - sRNA 156 -- 190@LB@Position Seed - mRNA 146 -- 152@LB@Position Seed - sRNA 102 -- 108@LB@ |
| 159 |
0.007366 |
0.1751 |
bsu06380 |
yebC |
-16.67 |
0.014812 |
77 -- 156 |
105 -- 185 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
|
_____________76__________________________________________________________________________157\n_____________|___________________________________________________________________________|\n5'-ACC...CAUGC_______AA___G__AAU________________AGGAA___UUC___A__U____UAA________________GCUGA...CGA-3'\n______________UUUACUU___AU_GA___GAC_UUGAC__UGUUC_____GGC___GGU_CC_UAUA___GUGUU_UUAUUUUCUU\n______________||||||:___||_:|___|||_|||||__|||:|_____:||___:||_||_||||___:||||_|:|:|||||:\n______________AAAUGAG___UA_UU___CUG_AACUG__ACAGG_____UCG___UCA_GG_AUAU___UACAA_AGUGAAAGAG\n3'-AUU...AAAAA_______AAG__G__GUC___U_____UA_____CG______U_____A__U____________C__________UAGAA...CAA-5'\n_____________|___________________________________________________________________________|\n_____________186_________________________________________________________________________104\n |
87 -- 93 |
165 -- 171 |
-36.2834 kcal/mol |
12.0661 kcal/mol |
14.3768 kcal/mol |
76 157@LB@ | |@LB@5'-ACC...CAUGC AA G AAU AGGAA UUC A U UAA GCUGA...CGA-3'@LB@ UUUACUU AU GA GAC UUGAC UGUUC GGC GGU CC UAUA GUGUU UUAUUUUCUU@LB@ ||||||: || :| ||| ||||| |||:| :|| :|| || |||| :|||| |:|:|||||:@LB@ AAAUGAG UA UU CUG AACUG ACAGG UCG UCA GG AUAU UACAA AGUGAAAGAG@LB@3'-AUU...AAAAA AAG G GUC U UA CG U A U C UAGAA...CAA-5'@LB@ | |@LB@ 186 104@LB@@LB@@LB@Energy -16.67 kcal/mol@LB@Hybridization Energy -36.2834 kcal/mol@LB@Unfolding Energy - mRNA 12.0661 kcal/mol@LB@Unfolding Energy - sRNA 14.3768 kcal/mol@LB@@LB@Position - mRNA 77 -- 156@LB@Position - sRNA 105 -- 185@LB@Position Seed - mRNA 87 -- 93@LB@Position Seed - sRNA 165 -- 171@LB@ |
| 165 |
0.007704 |
0.1751 |
bsu18170 |
yngA |
-16.77 |
0.014091 |
132 -- 192 |
122 -- 181 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 15849754 16850406; Product type pm: membrane component' |
|
_____________131_____________________________________________193\n_____________|_______________________________________________|\n5'-ACA...CAUAU_________UGUU____CA___C_______UAU______________CAACA...CGC-3'\n______________UUUAUUAAU____UAUU__ACA_UGUCCGC___AGUAA__UCCAUAU\n______________||:||:||:____:|||__|||_|||||||___||:||__|||||||\n______________AAGUAGUUG____GUAA__UGU_ACAGGCG___UCGUU__AGGUAUA\n3'-AUU...AUGAG_________UCCU____C____A_______________CA_______UUACA...CAA-5'\n_____________|_______________________________________________|\n_____________182_____________________________________________121\n |
186 -- 192 |
122 -- 128 |
-30.4083 kcal/mol |
4.20108 kcal/mol |
10.3807 kcal/mol |
131 193@LB@ | |@LB@5'-ACA...CAUAU UGUU CA C UAU CAACA...CGC-3'@LB@ UUUAUUAAU UAUU ACA UGUCCGC AGUAA UCCAUAU@LB@ ||:||:||: :||| ||| ||||||| ||:|| |||||||@LB@ AAGUAGUUG GUAA UGU ACAGGCG UCGUU AGGUAUA@LB@3'-AUU...AUGAG UCCU C A CA UUACA...CAA-5'@LB@ | |@LB@ 182 121@LB@@LB@@LB@Energy -16.77 kcal/mol@LB@Hybridization Energy -30.4083 kcal/mol@LB@Unfolding Energy - mRNA 4.20108 kcal/mol@LB@Unfolding Energy - sRNA 10.3807 kcal/mol@LB@@LB@Position - mRNA 132 -- 192@LB@Position - sRNA 122 -- 181@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 122 -- 128@LB@ |
