| 115 |
0.004814 |
0.1404 |
b2743 |
pcm |
-10.63 |
0.126788 |
157 -- 183 |
29 -- 48 |
L-isoaspartate protein carboxylmethyltransferase type II |
|
_____________156_________________________184\n_____________|___________________________|\n5'-AUC...CGCAA__U_______CAGA_____UAA_____GUGGG...AAA-3'\n______________GA_GUGGUUU____CUGGU___ACAGC\n______________||_||||||:____|||||___|||||\n______________CU_CACCAAG____GACCA___UGUCG\n3'-UUU...GAUUC__C________________________AUCGU...UCG-5'\n_____________|___________________________|\n_____________49__________________________28\n |
160 -- 166 |
39 -- 45 |
-22.1612 kcal/mol |
7.2267 kcal/mol |
4.30129 kcal/mol |
156 184@LB@ | |@LB@5'-AUC...CGCAA U CAGA UAA GUGGG...AAA-3'@LB@ GA GUGGUUU CUGGU ACAGC@LB@ || ||||||: ||||| |||||@LB@ CU CACCAAG GACCA UGUCG@LB@3'-UUU...GAUUC C AUCGU...UCG-5'@LB@ | |@LB@ 49 28@LB@@LB@@LB@Energy -10.63 kcal/mol@LB@Hybridization Energy -22.1612 kcal/mol@LB@Unfolding Energy - mRNA 7.2267 kcal/mol@LB@Unfolding Energy - sRNA 4.30129 kcal/mol@LB@@LB@Position - mRNA 157 -- 183@LB@Position - sRNA 29 -- 48@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 39 -- 45@LB@ |
| 51 |
0.001198 |
0.07744 |
b2174 |
lpxT |
-10.53 |
0.132559 |
260 -- 270 |
31 -- 41 |
lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase |
|
_____________259_________271\n_____________|___________|\n5'-GAA...UUUCU___________UCCCC...CGA-3'\n______________UUCCUGGUAUA\n______________|||||||||:|\n______________AAGGACCAUGU\n3'-UUU...CCACC___________CGAUC...UCG-5'\n_____________|___________|\n_____________42__________30\n |
264 -- 270 |
31 -- 37 |
-15.7095 kcal/mol |
1.92057 kcal/mol |
3.2552 kcal/mol |
259 271@LB@ | |@LB@5'-GAA...UUUCU UCCCC...CGA-3'@LB@ UUCCUGGUAUA@LB@ |||||||||:|@LB@ AAGGACCAUGU@LB@3'-UUU...CCACC CGAUC...UCG-5'@LB@ | |@LB@ 42 30@LB@@LB@@LB@Energy -10.53 kcal/mol@LB@Hybridization Energy -15.7095 kcal/mol@LB@Unfolding Energy - mRNA 1.92057 kcal/mol@LB@Unfolding Energy - sRNA 3.2552 kcal/mol@LB@@LB@Position - mRNA 260 -- 270@LB@Position - sRNA 31 -- 41@LB@Position Seed - mRNA 264 -- 270@LB@Position Seed - sRNA 31 -- 37@LB@ |
| 138 |
0.006247 |
0.1521 |
b1063 |
yceB |
-7.15 |
0.457702 |
84 -- 117 |
1 -- 32 |
lipoprotein DUF1439 family |
|
_____________83__________________________________118\n_____________|___________________________________|\n5'-UGC...CGCGG____CU_____CGC_______CCGCCG________UUUUU...ACC-3'\n______________CAGC__GUAUU____GGGUUG______UUUUCAGU\n______________||||__|:|||____|||||:______|||||||:\n______________GUCG__CGUAA____CCCAAU______AAAAGUCG\n3'-UUU...ACCAU____AU_____AAUA______ACA___________-5'\n_____________|__________________________________|\n_____________33_________________________________1\n |
111 -- 117 |
1 -- 7 |
-22.6034 kcal/mol |
13.9644 kcal/mol |
1.49075 kcal/mol |
83 118@LB@ | |@LB@5'-UGC...CGCGG CU CGC CCGCCG UUUUU...ACC-3'@LB@ CAGC GUAUU GGGUUG UUUUCAGU@LB@ |||| |:||| |||||: |||||||:@LB@ GUCG CGUAA CCCAAU AAAAGUCG@LB@3'-UUU...ACCAU AU AAUA ACA -5'@LB@ | |@LB@ 33 1@LB@@LB@@LB@Energy -7.15 kcal/mol@LB@Hybridization Energy -22.6034 kcal/mol@LB@Unfolding Energy - mRNA 13.9644 kcal/mol@LB@Unfolding Energy - sRNA 1.49075 kcal/mol@LB@@LB@Position - mRNA 84 -- 117@LB@Position - sRNA 1 -- 32@LB@Position Seed - mRNA 111 -- 117@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 63 |
0.00172 |
0.09016 |
b1209 |
lolB |
-15.80 |
0.006355 |
144 -- 167 |
11 -- 36 |
lipoprotein localization factor |
|
_____________143________________________168\n_____________|__________________________|\n5'-AAU...CGGAC____AC_________AA_________AACUG...GCC-3'\n______________GGUA__GCUAGCAUU____GGGUUAU\n______________||||__|||||||||____|||||||\n______________CCAU__CGAUCGUAA____CCCAAUA\n3'-UUU...AAGGA____GU_________AAUA_______CAAAA...UCG-5'\n_____________|__________________________|\n_____________37_________________________10\n |
161 -- 167 |
11 -- 17 |
-25.6291 kcal/mol |
8.35909 kcal/mol |
1.47376 kcal/mol |
143 168@LB@ | |@LB@5'-AAU...CGGAC AC AA AACUG...GCC-3'@LB@ GGUA GCUAGCAUU GGGUUAU@LB@ |||| ||||||||| |||||||@LB@ CCAU CGAUCGUAA CCCAAUA@LB@3'-UUU...AAGGA GU AAUA CAAAA...UCG-5'@LB@ | |@LB@ 37 10@LB@@LB@@LB@Energy -15.80 kcal/mol@LB@Hybridization Energy -25.6291 kcal/mol@LB@Unfolding Energy - mRNA 8.35909 kcal/mol@LB@Unfolding Energy - sRNA 1.47376 kcal/mol@LB@@LB@Position - mRNA 144 -- 167@LB@Position - sRNA 11 -- 36@LB@Position Seed - mRNA 161 -- 167@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 19 |
0.000151 |
0.02671 |
b2142 |
yohK |
-18.84 |
0.000427 |
90 -- 130 |
4 -- 49 |
LrgB family inner membrane protein |
|
_____________89______________________________________________131\n_____________|_______________________________________________|\n5'-GUA...GGCCC__UA____U_____________C____CGCU______G_________UGGUG...CGU-3'\n______________GG__GUGG_UUCCU_GUGCAGU_AGUA_______GGU___GUUUUUC\n______________||__||||_|||||_||:|||:_||:|_______|||___|||||||\n______________CC__CACC_AAGGA_CAUGUCG_UCGU_______CCA___CAAAAAG\n3'-UUU...CGAUU__UC__________C_______A____AAAAUAC___AUA_______UCG-5'\n_____________|_______________________________________________|\n_____________50______________________________________________3\n |
124 -- 130 |
4 -- 10 |
-35.205 kcal/mol |
11.7562 kcal/mol |
4.60954 kcal/mol |
89 131@LB@ | |@LB@5'-GUA...GGCCC UA U C CGCU G UGGUG...CGU-3'@LB@ GG GUGG UUCCU GUGCAGU AGUA GGU GUUUUUC@LB@ || |||| ||||| ||:|||: ||:| ||| |||||||@LB@ CC CACC AAGGA CAUGUCG UCGU CCA CAAAAAG@LB@3'-UUU...CGAUU UC C A AAAAUAC AUA UCG-5'@LB@ | |@LB@ 50 3@LB@@LB@@LB@Energy -18.84 kcal/mol@LB@Hybridization Energy -35.205 kcal/mol@LB@Unfolding Energy - mRNA 11.7562 kcal/mol@LB@Unfolding Energy - sRNA 4.60954 kcal/mol@LB@@LB@Position - mRNA 90 -- 130@LB@Position - sRNA 4 -- 49@LB@Position Seed - mRNA 124 -- 130@LB@Position Seed - sRNA 4 -- 10@LB@ |
| 83 |
0.002775 |
0.1082 |
b2049 |
cpsB |
-6.85 |
0.497101 |
286 -- 298 |
17 -- 31 |
mannose-1-phosphate guanyltransferase |
|
_____________285_____________299\n_____________|_______________|\n5'-ACA...UCCCA_______________CC-3'\n______________AGC_AGU_UUUUAUG\n______________|||_||:_|||||||\n______________UCG_UCG_AAAAUAC\n3'-UUU...CCAUG___A___U_______CCAAU...UCG-5'\n_____________|_______________|\n_____________32______________16\n |
292 -- 298 |
17 -- 23 |
-8.99018 kcal/mol |
0.716641 kcal/mol |
1.4259 kcal/mol |
285 299@LB@ | |@LB@5'-ACA...UCCCA CC-3'@LB@ AGC AGU UUUUAUG@LB@ ||| ||: |||||||@LB@ UCG UCG AAAAUAC@LB@3'-UUU...CCAUG A U CCAAU...UCG-5'@LB@ | |@LB@ 32 16@LB@@LB@@LB@Energy -6.85 kcal/mol@LB@Hybridization Energy -8.99018 kcal/mol@LB@Unfolding Energy - mRNA 0.716641 kcal/mol@LB@Unfolding Energy - sRNA 1.4259 kcal/mol@LB@@LB@Position - mRNA 286 -- 298@LB@Position - sRNA 17 -- 31@LB@Position Seed - mRNA 292 -- 298@LB@Position Seed - sRNA 17 -- 23@LB@ |
| 181 |
0.0104 |
0.1919 |
b2106 |
rcnA |
-12.10 |
0.062308 |
133 -- 155 |
15 -- 50 |
membrane protein conferring nickel and cobalt resistance |
|
_____________132__________________________________156\n_____________|____________________________________|\n5'-UUC...CUACU_______A__A__A______________________GGGGA...ACU-3'\n______________GGGGGGU_GU_UC_GGUAC_____________UGGG\n______________:||:|||_||_:|_|||||_____________||||\n______________UCCUCCA_CA_GG_CCAUG_____________ACCC\n3'-UUU...CCGAU_______C__A__A_____UCGAUCGUAAAAU____AAUAC...UCG-5'\n_____________|____________________________________|\n_____________51___________________________________14\n |
133 -- 139 |
44 -- 50 |
-22.0891 kcal/mol |
5.35824 kcal/mol |
4.62773 kcal/mol |
132 156@LB@ | |@LB@5'-UUC...CUACU A A A GGGGA...ACU-3'@LB@ GGGGGGU GU UC GGUAC UGGG@LB@ :||:||| || :| ||||| ||||@LB@ UCCUCCA CA GG CCAUG ACCC@LB@3'-UUU...CCGAU C A A UCGAUCGUAAAAU AAUAC...UCG-5'@LB@ | |@LB@ 51 14@LB@@LB@@LB@Energy -12.10 kcal/mol@LB@Hybridization Energy -22.0891 kcal/mol@LB@Unfolding Energy - mRNA 5.35824 kcal/mol@LB@Unfolding Energy - sRNA 4.62773 kcal/mol@LB@@LB@Position - mRNA 133 -- 155@LB@Position - sRNA 15 -- 50@LB@Position Seed - mRNA 133 -- 139@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 146 |
0.006865 |
0.158 |
b2701 |
mltB |
-8.70 |
0.277719 |
77 -- 106 |
9 -- 36 |
membrane-bound lytic murein transglycosylase B |
|
_____________76______________________________107\n_____________|_______________________________|\n5'-AGA...UAAAA________G__G_GAAUGAGU__A_______AAAGU...GAA-3'\n______________GG_AUAGC_AG_G________UG_GUUAUGU\n______________||_|:|||_||_:________||_|||||||\n______________CC_UGUCG_UC_U________AC_CAAUACA\n3'-UUU...AAGGA__A_____A__G_AAAAU_____C_______AAAAGUCG-5'\n_____________|_______________________________|\n_____________37______________________________8\n |
100 -- 106 |
9 -- 15 |
-15.8871 kcal/mol |
5.69864 kcal/mol |
1.48926 kcal/mol |
76 107@LB@ | |@LB@5'-AGA...UAAAA G G GAAUGAGU A AAAGU...GAA-3'@LB@ GG AUAGC AG G UG GUUAUGU@LB@ || |:||| || : || |||||||@LB@ CC UGUCG UC U AC CAAUACA@LB@3'-UUU...AAGGA A A G AAAAU C AAAAGUCG-5'@LB@ | |@LB@ 37 8@LB@@LB@@LB@Energy -8.70 kcal/mol@LB@Hybridization Energy -15.8871 kcal/mol@LB@Unfolding Energy - mRNA 5.69864 kcal/mol@LB@Unfolding Energy - sRNA 1.48926 kcal/mol@LB@@LB@Position - mRNA 77 -- 106@LB@Position - sRNA 9 -- 36@LB@Position Seed - mRNA 100 -- 106@LB@Position Seed - sRNA 9 -- 15@LB@ |
| 180 |
0.01039 |
0.1919 |
b1778 |
msrB |
-9.69 |
0.189810 |
88 -- 95 |
29 -- 36 |
methionine sulfoxide reductase B |
|
_____________87_______96\n_____________|________|\n5'-CUU...AUUUA________CAUUU...GUC-3'\n______________GGUGCAGC\n______________|||:||||\n______________CCAUGUCG\n3'-UUU...AAGGA________AUCGU...UCG-5'\n_____________|________|\n_____________37_______28\n |
89 -- 95 |
29 -- 35 |
-13.558 kcal/mol |
2.69806 kcal/mol |
1.16901 kcal/mol |
87 96@LB@ | |@LB@5'-CUU...AUUUA CAUUU...GUC-3'@LB@ GGUGCAGC@LB@ |||:||||@LB@ CCAUGUCG@LB@3'-UUU...AAGGA AUCGU...UCG-5'@LB@ | |@LB@ 37 28@LB@@LB@@LB@Energy -9.69 kcal/mol@LB@Hybridization Energy -13.558 kcal/mol@LB@Unfolding Energy - mRNA 2.69806 kcal/mol@LB@Unfolding Energy - sRNA 1.16901 kcal/mol@LB@@LB@Position - mRNA 88 -- 95@LB@Position - sRNA 29 -- 36@LB@Position Seed - mRNA 89 -- 95@LB@Position Seed - sRNA 29 -- 35@LB@ |
| 60 |
0.001479 |
0.08283 |
b1886 |
tar |
-8.65 |
0.283085 |
258 -- 290 |
4 -- 38 |
methyl-accepting chemotaxis protein II |
|
_____________257__________________________________291\n_____________|____________________________________|\n5'-UGC...UCGCA___U______________CC___CAGUC________UCUUC...UUC-3'\n______________CUG_UACAGCU__UAUUU___GG_____UGUUUUUU\n______________|||_|||||||__:||||___||_____|||||||:\n______________GAC_AUGUCGA__GUAAA___CC_____ACAAAAAG\n3'-UUU...CCAAG___C_______UC_____AUA__CAAU_________UCG-5'\n_____________|____________________________________|\n_____________39___________________________________3\n |
284 -- 290 |
4 -- 10 |
-19.1357 kcal/mol |
5.94997 kcal/mol |
4.53981 kcal/mol |
257 291@LB@ | |@LB@5'-UGC...UCGCA U CC CAGUC UCUUC...UUC-3'@LB@ CUG UACAGCU UAUUU GG UGUUUUUU@LB@ ||| ||||||| :|||| || |||||||:@LB@ GAC AUGUCGA GUAAA CC ACAAAAAG@LB@3'-UUU...CCAAG C UC AUA CAAU UCG-5'@LB@ | |@LB@ 39 3@LB@@LB@@LB@Energy -8.65 kcal/mol@LB@Hybridization Energy -19.1357 kcal/mol@LB@Unfolding Energy - mRNA 5.94997 kcal/mol@LB@Unfolding Energy - sRNA 4.53981 kcal/mol@LB@@LB@Position - mRNA 258 -- 290@LB@Position - sRNA 4 -- 38@LB@Position Seed - mRNA 284 -- 290@LB@Position Seed - sRNA 4 -- 10@LB@ |
