179 |
0.02223 |
0.4143 |
b2167 |
fruA |
-7.15 |
0.399094 |
192 -- 200 |
5 -- 13 |
fused fructose-specific PTS enzymes: IIBcomponent/IIC components |
|
_____________191_______201\n_____________|_________|\n5'-CGC...GCAGG_________AUGAA...AAA-3'\n______________AGAGGCAUA\n______________|:|||||||\n______________UUUCCGUAU\n3'-UUU...UGUUA_________AUUG-5'\n_____________|_________|\n_____________14________4\n |
194 -- 200 |
5 -- 11 |
-11.8443 kcal/mol |
1.8873 kcal/mol |
2.80332 kcal/mol |
191 201@LB@ | |@LB@5'-CGC...GCAGG AUGAA...AAA-3'@LB@ AGAGGCAUA@LB@ |:|||||||@LB@ UUUCCGUAU@LB@3'-UUU...UGUUA AUUG-5'@LB@ | |@LB@ 14 4@LB@@LB@@LB@Energy -7.15 kcal/mol@LB@Hybridization Energy -11.8443 kcal/mol@LB@Unfolding Energy - mRNA 1.8873 kcal/mol@LB@Unfolding Energy - sRNA 2.80332 kcal/mol@LB@@LB@Position - mRNA 192 -- 200@LB@Position - sRNA 5 -- 13@LB@Position Seed - mRNA 194 -- 200@LB@Position Seed - sRNA 5 -- 11@LB@ |
123 |
0.01273 |
0.3462 |
b1817 |
manX |
-9.41 |
0.160028 |
181 -- 191 |
9 -- 19 |
fused mannose-specific PTS enzymes: IIA component/IIB component |
|
_____________180_________192\n_____________|___________|\n5'-UUA...UUAAC___________AGGUA...GGA-3'\n______________GAUAAUAAAGG\n______________||:||||||||\n______________CUGUUAUUUCC\n3'-UUU...AGACA___________GUAUAUUG-5'\n_____________|___________|\n_____________20__________8\n |
185 -- 191 |
9 -- 15 |
-11.4394 kcal/mol |
1.08042 kcal/mol |
0.949641 kcal/mol |
180 192@LB@ | |@LB@5'-UUA...UUAAC AGGUA...GGA-3'@LB@ GAUAAUAAAGG@LB@ ||:||||||||@LB@ CUGUUAUUUCC@LB@3'-UUU...AGACA GUAUAUUG-5'@LB@ | |@LB@ 20 8@LB@@LB@@LB@Energy -9.41 kcal/mol@LB@Hybridization Energy -11.4394 kcal/mol@LB@Unfolding Energy - mRNA 1.08042 kcal/mol@LB@Unfolding Energy - sRNA 0.949641 kcal/mol@LB@@LB@Position - mRNA 181 -- 191@LB@Position - sRNA 9 -- 19@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 9 -- 15@LB@ |
199 |
0.02539 |
0.4256 |
b2094 |
gatA |
-8.91 |
0.199733 |
27 -- 47 |
1 -- 21 |
galactitol-specific enzyme IIA component of PTS |
|
_____________26_____________________48\n_____________|______________________|\n5'-UUA...UGAUG____AUCU______________AUCCC...AUG-3'\n______________GUGA____UGAAGGCGUG_GAC\n______________||||____|:|||||:|:_:||\n______________CACU____AUUUCCGUAU_UUG\n3'-UUU...UUAGA____GUU___________A___-5'\n_____________|_____________________|\n_____________22____________________1\n |
38 -- 44 |
5 -- 11 |
-17.7737 kcal/mol |
4.45083 kcal/mol |
4.41334 kcal/mol |
26 48@LB@ | |@LB@5'-UUA...UGAUG AUCU AUCCC...AUG-3'@LB@ GUGA UGAAGGCGUG GAC@LB@ |||| |:|||||:|: :||@LB@ CACU AUUUCCGUAU UUG@LB@3'-UUU...UUAGA GUU A -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -8.91 kcal/mol@LB@Hybridization Energy -17.7737 kcal/mol@LB@Unfolding Energy - mRNA 4.45083 kcal/mol@LB@Unfolding Energy - sRNA 4.41334 kcal/mol@LB@@LB@Position - mRNA 27 -- 47@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 38 -- 44@LB@Position Seed - sRNA 5 -- 11@LB@ |
33 |
0.002101 |
0.2088 |
b1300 |
puuC |
-8.92 |
0.198515 |
81 -- 101 |
2 -- 20 |
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase |
b0312 |
_____________80____________________102\n_____________|_____________________|\n5'-GGC...CGGCU___AG_______U________AGAAU...AAA-3'\n______________UGA__GAUGAAG_GUAUAUAA\n______________|||__:||:|||_|:||||||\n______________ACU__UUAUUUC_CGUAUAUU\n3'-UUU...UAGAC___G_________________G-5'\n_____________|_____________________|\n_____________21____________________1\n |
94 -- 100 |
3 -- 9 |
-14.4968 kcal/mol |
1.34672 kcal/mol |
4.22649 kcal/mol |
80 102@LB@ | |@LB@5'-GGC...CGGCU AG U AGAAU...AAA-3'@LB@ UGA GAUGAAG GUAUAUAA@LB@ ||| :||:||| |:||||||@LB@ ACU UUAUUUC CGUAUAUU@LB@3'-UUU...UAGAC G G-5'@LB@ | |@LB@ 21 1@LB@@LB@@LB@Energy -8.92 kcal/mol@LB@Hybridization Energy -14.4968 kcal/mol@LB@Unfolding Energy - mRNA 1.34672 kcal/mol@LB@Unfolding Energy - sRNA 4.22649 kcal/mol@LB@@LB@Position - mRNA 81 -- 101@LB@Position - sRNA 2 -- 20@LB@Position Seed - mRNA 94 -- 100@LB@Position Seed - sRNA 3 -- 9@LB@ |
38 |
0.00253 |
0.2088 |
b3789 |
rffH |
-8.84 |
0.205897 |
98 -- 106 |
51 -- 59 |
glucose-1-phosphate thymidylyltransferase |
|
_____________97________107\n_____________|_________|\n5'-GGC...ACGGU_________UCUGG...UGA-3'\n______________UCAGUGGUA\n______________|||||||:|\n______________AGUCACCGU\n3'-UUU...CUUUU_________UACGU...UUG-5'\n_____________|_________|\n_____________60________50\n |
100 -- 106 |
51 -- 57 |
-13.9039 kcal/mol |
2.34576 kcal/mol |
2.71896 kcal/mol |
97 107@LB@ | |@LB@5'-GGC...ACGGU UCUGG...UGA-3'@LB@ UCAGUGGUA@LB@ |||||||:|@LB@ AGUCACCGU@LB@3'-UUU...CUUUU UACGU...UUG-5'@LB@ | |@LB@ 60 50@LB@@LB@@LB@Energy -8.84 kcal/mol@LB@Hybridization Energy -13.9039 kcal/mol@LB@Unfolding Energy - mRNA 2.34576 kcal/mol@LB@Unfolding Energy - sRNA 2.71896 kcal/mol@LB@@LB@Position - mRNA 98 -- 106@LB@Position - sRNA 51 -- 59@LB@Position Seed - mRNA 100 -- 106@LB@Position Seed - sRNA 51 -- 57@LB@ |
90 |
0.007755 |
0.2889 |
b1852 |
zwf |
-12.23 |
0.039232 |
191 -- 223 |
38 -- 65 |
glucose-6-phosphate 1-dehydrogenase |
|
_____________190_______________________________224\n_____________|_________________________________|\n5'-UCA...CUUAA_______G_CA_______AAC____ACA_____GGCCU...UGG-3'\n______________GGAGAAU_A__UGGCGGU___GCAA___GCCCA\n______________|||:|||_|__||||::|___||||___|||||\n______________CCUUUUA_U__ACCGUUA___CGUU___CGGGU\n3'-UUU...UACAA_______G_C_______________AC______UGUCU...UUG-5'\n_____________|_________________________________|\n_____________66________________________________37\n |
202 -- 208 |
49 -- 55 |
-27.1425 kcal/mol |
8.24293 kcal/mol |
6.67322 kcal/mol |
190 224@LB@ | |@LB@5'-UCA...CUUAA G CA AAC ACA GGCCU...UGG-3'@LB@ GGAGAAU A UGGCGGU GCAA GCCCA@LB@ |||:||| | ||||::| |||| |||||@LB@ CCUUUUA U ACCGUUA CGUU CGGGU@LB@3'-UUU...UACAA G C AC UGUCU...UUG-5'@LB@ | |@LB@ 66 37@LB@@LB@@LB@Energy -12.23 kcal/mol@LB@Hybridization Energy -27.1425 kcal/mol@LB@Unfolding Energy - mRNA 8.24293 kcal/mol@LB@Unfolding Energy - sRNA 6.67322 kcal/mol@LB@@LB@Position - mRNA 191 -- 223@LB@Position - sRNA 38 -- 65@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 49 -- 55@LB@ |
69 |
0.005697 |
0.2777 |
b0829 |
gsiA |
-9.42 |
0.158982 |
246 -- 287 |
28 -- 64 |
glutathione ABC transporter ATPase |
|
_____________245__________________________________________288\n_____________|____________________________________________|\n5'-CGG...CGGUU_______UGAAUAUU__CUUU_________A_____________GCUGC...GCA-3'\n______________GAAAAUC________GC____AUGCA__GG_CCAGCAGAAAAUA\n______________|||||||________||____|||||__||_|||:|||||||||\n______________CUUUUAG________CG____UACGU__CC_GGUUGUCUUUUAU\n3'-UUU...ACAAC_______UCAC______U________UA__G_____________UUUAG...UUG-5'\n_____________|____________________________________________|\n_____________65___________________________________________27\n |
246 -- 252 |
58 -- 64 |
-27.8415 kcal/mol |
7.44564 kcal/mol |
10.972 kcal/mol |
245 288@LB@ | |@LB@5'-CGG...CGGUU UGAAUAUU CUUU A GCUGC...GCA-3'@LB@ GAAAAUC GC AUGCA GG CCAGCAGAAAAUA@LB@ ||||||| || ||||| || |||:|||||||||@LB@ CUUUUAG CG UACGU CC GGUUGUCUUUUAU@LB@3'-UUU...ACAAC UCAC U UA G UUUAG...UUG-5'@LB@ | |@LB@ 65 27@LB@@LB@@LB@Energy -9.42 kcal/mol@LB@Hybridization Energy -27.8415 kcal/mol@LB@Unfolding Energy - mRNA 7.44564 kcal/mol@LB@Unfolding Energy - sRNA 10.972 kcal/mol@LB@@LB@Position - mRNA 246 -- 287@LB@Position - sRNA 28 -- 64@LB@Position Seed - mRNA 246 -- 252@LB@Position Seed - sRNA 58 -- 64@LB@ |
79 |
0.006804 |
0.2822 |
b2947 |
gshB |
-11.48 |
0.058268 |
213 -- 229 |
39 -- 54 |
glutathione synthetase |
|
_____________212_______________230\n_____________|_________________|\n5'-UGC...AGCUC____UC_______A___CAUCG...ACG-3'\n______________GGCA__GUGAUGG_CCC\n______________||||__|::||||_|||\n______________CCGU__CGUUACC_GGG\n3'-UUU...AGUCA____UA___________UUGUC...UUG-5'\n_____________|_________________|\n_____________55________________38\n |
219 -- 225 |
42 -- 48 |
-21.2333 kcal/mol |
4.99211 kcal/mol |
4.76022 kcal/mol |
212 230@LB@ | |@LB@5'-UGC...AGCUC UC A CAUCG...ACG-3'@LB@ GGCA GUGAUGG CCC@LB@ |||| |::|||| |||@LB@ CCGU CGUUACC GGG@LB@3'-UUU...AGUCA UA UUGUC...UUG-5'@LB@ | |@LB@ 55 38@LB@@LB@@LB@Energy -11.48 kcal/mol@LB@Hybridization Energy -21.2333 kcal/mol@LB@Unfolding Energy - mRNA 4.99211 kcal/mol@LB@Unfolding Energy - sRNA 4.76022 kcal/mol@LB@@LB@Position - mRNA 213 -- 229@LB@Position - sRNA 39 -- 54@LB@Position Seed - mRNA 219 -- 225@LB@Position Seed - sRNA 42 -- 48@LB@ |
10 |
0.0004066 |
0.1262 |
b3429 |
glgA |
-9.74 |
0.137242 |
173 -- 185 |
51 -- 64 |
glycogen synthase |
|
_____________172____________186\n_____________|______________|\n5'-GUA...GCUAC______________UAAAC...ACG-3'\n______________GGAAGUUAG_GGCA\n______________|:||:|:||_||||\n______________CUUUUAGUC_CCGU\n3'-UUU...ACAAC_________A____UACGU...UUG-5'\n_____________|______________|\n_____________65_____________50\n |
175 -- 181 |
56 -- 62 |
-15.3924 kcal/mol |
2.76007 kcal/mol |
2.8882 kcal/mol |
172 186@LB@ | |@LB@5'-GUA...GCUAC UAAAC...ACG-3'@LB@ GGAAGUUAG GGCA@LB@ |:||:|:|| ||||@LB@ CUUUUAGUC CCGU@LB@3'-UUU...ACAAC A UACGU...UUG-5'@LB@ | |@LB@ 65 50@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -15.3924 kcal/mol@LB@Unfolding Energy - mRNA 2.76007 kcal/mol@LB@Unfolding Energy - sRNA 2.8882 kcal/mol@LB@@LB@Position - mRNA 173 -- 185@LB@Position - sRNA 51 -- 64@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 56 -- 62@LB@ |
51 |
0.003814 |
0.237 |
b3888 |
yiiD |
-11.06 |
0.072417 |
149 -- 179 |
39 -- 72 |
GNAT family putative N-acetyltransferase |
|
_____________148_________________________________180\n_____________|___________________________________|\n5'-UUU...UGCGG_____CA__U______C___U______________CGUGA...AUC-3'\n______________AUAUG__GG___AUCG_UGG_CAAUG__AUGGCCC\n______________|||||__||___|||:_|||_|||||__|||||||\n______________UAUAC__CC___UAGU_ACC_GUUAC__UACCGGG\n3'-UUU...AAAAA_____AA__UUU____C_________GU_______UUGUC...UUG-5'\n_____________|___________________________________|\n_____________73__________________________________38\n |
173 -- 179 |
39 -- 45 |
-28.8621 kcal/mol |
10.5098 kcal/mol |
7.29447 kcal/mol |
148 180@LB@ | |@LB@5'-UUU...UGCGG CA U C U CGUGA...AUC-3'@LB@ AUAUG GG AUCG UGG CAAUG AUGGCCC@LB@ ||||| || |||: ||| ||||| |||||||@LB@ UAUAC CC UAGU ACC GUUAC UACCGGG@LB@3'-UUU...AAAAA AA UUU C GU UUGUC...UUG-5'@LB@ | |@LB@ 73 38@LB@@LB@@LB@Energy -11.06 kcal/mol@LB@Hybridization Energy -28.8621 kcal/mol@LB@Unfolding Energy - mRNA 10.5098 kcal/mol@LB@Unfolding Energy - sRNA 7.29447 kcal/mol@LB@@LB@Position - mRNA 149 -- 179@LB@Position - sRNA 39 -- 72@LB@Position Seed - mRNA 173 -- 179@LB@Position Seed - sRNA 39 -- 45@LB@ |