| 183 |
0.011 |
0.2089 |
b0906 |
ycaP |
-11.77 |
0.063722 |
48 -- 74 |
48 -- 75 |
UPF0702 family putative inner membrane protein |
|
_____________47___________________________75\n_____________|____________________________|\n5'-AGU...UCUUU________UAAA___U_______A____AAUCA...UCU-3'\n______________GCCGGGGA_____UG_UUGCGUC_UGAA\n______________:||:||||_____||_:||||:|_|:||\n______________UGGUCCCU_____AC_GACGCGG_AUUU\n3'-UUU...GGUUG________UUAGA__C_______C____AAUAA...GUG-5'\n_____________|____________________________|\n_____________76___________________________47\n |
63 -- 69 |
53 -- 59 |
-25.8143 kcal/mol |
5.22968 kcal/mol |
8.81811 kcal/mol |
47 75@LB@ | |@LB@5'-AGU...UCUUU UAAA U A AAUCA...UCU-3'@LB@ GCCGGGGA UG UUGCGUC UGAA@LB@ :||:|||| || :||||:| |:||@LB@ UGGUCCCU AC GACGCGG AUUU@LB@3'-UUU...GGUUG UUAGA C C AAUAA...GUG-5'@LB@ | |@LB@ 76 47@LB@@LB@@LB@Energy -11.77 kcal/mol@LB@Hybridization Energy -25.8143 kcal/mol@LB@Unfolding Energy - mRNA 5.22968 kcal/mol@LB@Unfolding Energy - sRNA 8.81811 kcal/mol@LB@@LB@Position - mRNA 48 -- 74@LB@Position - sRNA 48 -- 75@LB@Position Seed - mRNA 63 -- 69@LB@Position Seed - sRNA 53 -- 59@LB@ |
| 51 |
0.002608 |
0.1727 |
b2299 |
yfcD |
-9.22 |
0.194301 |
162 -- 171 |
49 -- 58 |
putative NUDIX hydrolase |
|
_____________161________172\n_____________|__________|\n5'-AGA...CAAAA__________GAGCG...AGU-3'\n______________UGCGCCGUAA\n______________||||||||||\n______________ACGCGGCAUU\n3'-UUU...AACCG__________UAAUA...GUG-5'\n_____________|__________|\n_____________59_________48\n |
165 -- 171 |
49 -- 55 |
-16.7903 kcal/mol |
2.6527 kcal/mol |
4.92198 kcal/mol |
161 172@LB@ | |@LB@5'-AGA...CAAAA GAGCG...AGU-3'@LB@ UGCGCCGUAA@LB@ ||||||||||@LB@ ACGCGGCAUU@LB@3'-UUU...AACCG UAAUA...GUG-5'@LB@ | |@LB@ 59 48@LB@@LB@@LB@Energy -9.22 kcal/mol@LB@Hybridization Energy -16.7903 kcal/mol@LB@Unfolding Energy - mRNA 2.6527 kcal/mol@LB@Unfolding Energy - sRNA 4.92198 kcal/mol@LB@@LB@Position - mRNA 162 -- 171@LB@Position - sRNA 49 -- 58@LB@Position Seed - mRNA 165 -- 171@LB@Position Seed - sRNA 49 -- 55@LB@ |
| 68 |
0.00345 |
0.1727 |
b3168 |
infB |
-10.64 |
0.105292 |
126 -- 148 |
49 -- 77 |
translation initiation factor IF-2 |
|
_____________125___________________________149\n_____________|_____________________________|\n5'-AAG...CCGGA______________A______________UAUUU...CUG-3'\n______________GCACU_____GAUU_UGGCUGC_CCGUAA\n______________:|||:_____:||:_|||||||_||||||\n______________UGUGG_____UUAG_ACCGACG_GGCAUU\n3'-UUU...GCGGU_____UCCCU____A_______C______UAAUA...GUG-5'\n_____________|_____________________________|\n_____________78____________________________48\n |
136 -- 142 |
56 -- 62 |
-27.6009 kcal/mol |
7.61735 kcal/mol |
9.34562 kcal/mol |
125 149@LB@ | |@LB@5'-AAG...CCGGA A UAUUU...CUG-3'@LB@ GCACU GAUU UGGCUGC CCGUAA@LB@ :|||: :||: ||||||| ||||||@LB@ UGUGG UUAG ACCGACG GGCAUU@LB@3'-UUU...GCGGU UCCCU A C UAAUA...GUG-5'@LB@ | |@LB@ 78 48@LB@@LB@@LB@Energy -10.64 kcal/mol@LB@Hybridization Energy -27.6009 kcal/mol@LB@Unfolding Energy - mRNA 7.61735 kcal/mol@LB@Unfolding Energy - sRNA 9.34562 kcal/mol@LB@@LB@Position - mRNA 126 -- 148@LB@Position - sRNA 49 -- 77@LB@Position Seed - mRNA 136 -- 142@LB@Position Seed - sRNA 56 -- 62@LB@ |
| 113 |
0.005997 |
0.1855 |
b1765 |
ydjA |
-10.36 |
0.119141 |
118 -- 144 |
49 -- 76 |
putative oxidoreductase |
|
_____________117___________________________145\n_____________|_____________________________|\n5'-AUU...CUUGU__G__________GC__A___________CAAAA...GUA-3'\n______________CA_CAGG__AAUU__GG_CUGUGCUGUAA\n______________||_||||__|||:__||_|||:||:||||\n______________GU_GUCC__UUAG__CC_GACGCGGCAUU\n3'-UUU...CGGUU__G____CU____AA______________UAAUA...GUG-5'\n_____________|_____________________________|\n_____________77____________________________48\n |
138 -- 144 |
49 -- 55 |
-28.7704 kcal/mol |
9.07167 kcal/mol |
9.34253 kcal/mol |
117 145@LB@ | |@LB@5'-AUU...CUUGU G GC A CAAAA...GUA-3'@LB@ CA CAGG AAUU GG CUGUGCUGUAA@LB@ || |||| |||: || |||:||:||||@LB@ GU GUCC UUAG CC GACGCGGCAUU@LB@3'-UUU...CGGUU G CU AA UAAUA...GUG-5'@LB@ | |@LB@ 77 48@LB@@LB@@LB@Energy -10.36 kcal/mol@LB@Hybridization Energy -28.7704 kcal/mol@LB@Unfolding Energy - mRNA 9.07167 kcal/mol@LB@Unfolding Energy - sRNA 9.34253 kcal/mol@LB@@LB@Position - mRNA 118 -- 144@LB@Position - sRNA 49 -- 76@LB@Position Seed - mRNA 138 -- 144@LB@Position Seed - sRNA 49 -- 55@LB@ |
| 47 |
0.002359 |
0.1727 |
b1520 |
yneE |
-16.33 |
0.007995 |
225 -- 237 |
50 -- 62 |
bestrophin family putative inner membrane protein |
|
_____________224___________238\n_____________|_____________|\n5'-CGU...AACAC_____________UUUUU...UCU-3'\n______________UGGCUGCGCCGUA\n______________|||||||||||||\n______________ACCGACGCGGCAU\n3'-UUU...UUAGA_____________UUAAU...GUG-5'\n_____________|_____________|\n_____________63____________49\n |
231 -- 237 |
50 -- 56 |
-27.5123 kcal/mol |
5.30923 kcal/mol |
5.87004 kcal/mol |
224 238@LB@ | |@LB@5'-CGU...AACAC UUUUU...UCU-3'@LB@ UGGCUGCGCCGUA@LB@ |||||||||||||@LB@ ACCGACGCGGCAU@LB@3'-UUU...UUAGA UUAAU...GUG-5'@LB@ | |@LB@ 63 49@LB@@LB@@LB@Energy -16.33 kcal/mol@LB@Hybridization Energy -27.5123 kcal/mol@LB@Unfolding Energy - mRNA 5.30923 kcal/mol@LB@Unfolding Energy - sRNA 5.87004 kcal/mol@LB@@LB@Position - mRNA 225 -- 237@LB@Position - sRNA 50 -- 62@LB@Position Seed - mRNA 231 -- 237@LB@Position Seed - sRNA 50 -- 56@LB@ |
| 79 |
0.004357 |
0.1855 |
b0008 |
talB |
-10.61 |
0.106795 |
240 -- 280 |
50 -- 88 |
transaldolase B |
|
_____________239________________________________________281\n_____________|__________________________________________|\n5'-AGG...CCACC___G_________________C___GC___AAUGAA______UCAAC...CAA-3'\n______________GUA_UG_GCCGACACUGGGGA_AUC__GGC______GCUGUA\n______________:||_||_|||:||||::||||_|||__|||______||:|||\n______________UAU_AC_CGGUUGUGGUCCCU_UAG__CCG______CGGCAU\n3'-UUU...GCGCU___G__G______________U___AA___ACG_________UUAAU...GUG-5'\n_____________|__________________________________________|\n_____________89_________________________________________49\n |
253 -- 259 |
68 -- 74 |
-44.9099 kcal/mol |
17.4497 kcal/mol |
16.8544 kcal/mol |
239 281@LB@ | |@LB@5'-AGG...CCACC G C GC AAUGAA UCAAC...CAA-3'@LB@ GUA UG GCCGACACUGGGGA AUC GGC GCUGUA@LB@ :|| || |||:||||::|||| ||| ||| ||:|||@LB@ UAU AC CGGUUGUGGUCCCU UAG CCG CGGCAU@LB@3'-UUU...GCGCU G G U AA ACG UUAAU...GUG-5'@LB@ | |@LB@ 89 49@LB@@LB@@LB@Energy -10.61 kcal/mol@LB@Hybridization Energy -44.9099 kcal/mol@LB@Unfolding Energy - mRNA 17.4497 kcal/mol@LB@Unfolding Energy - sRNA 16.8544 kcal/mol@LB@@LB@Position - mRNA 240 -- 280@LB@Position - sRNA 50 -- 88@LB@Position Seed - mRNA 253 -- 259@LB@Position Seed - sRNA 68 -- 74@LB@ |
| 148 |
0.008708 |
0.2059 |
b1754 |
ynjB |
-13.35 |
0.031185 |
160 -- 171 |
50 -- 61 |
putative ABC transporter periplasmic binding protein |
|
_____________159__________172\n_____________|____________|\n5'-CCG...UCAGG____________UUCCU...AAA-3'\n______________GGCUGUGCCGUA\n______________|||||:||||||\n______________CCGACGCGGCAU\n3'-UUU...UAGAA____________UUAAU...GUG-5'\n_____________|____________|\n_____________62___________49\n |
165 -- 171 |
50 -- 56 |
-23.078 kcal/mol |
3.86799 kcal/mol |
5.86332 kcal/mol |
159 172@LB@ | |@LB@5'-CCG...UCAGG UUCCU...AAA-3'@LB@ GGCUGUGCCGUA@LB@ |||||:||||||@LB@ CCGACGCGGCAU@LB@3'-UUU...UAGAA UUAAU...GUG-5'@LB@ | |@LB@ 62 49@LB@@LB@@LB@Energy -13.35 kcal/mol@LB@Hybridization Energy -23.078 kcal/mol@LB@Unfolding Energy - mRNA 3.86799 kcal/mol@LB@Unfolding Energy - sRNA 5.86332 kcal/mol@LB@@LB@Position - mRNA 160 -- 171@LB@Position - sRNA 50 -- 61@LB@Position Seed - mRNA 165 -- 171@LB@Position Seed - sRNA 50 -- 56@LB@ |
| 152 |
0.009044 |
0.2059 |
b1448 |
mnaT |
-7.00 |
0.457084 |
229 -- 266 |
50 -- 86 |
methionine N-acyltransferase; L-amino acid N-acyltransferase |
|
_____________228____________________________________267\n_____________|______________________________________|\n5'-CGC...AGCCG_________C_____C________AUAACCA_______UUGUA...CGG-3'\n______________ACUGUGCUG_CAUUG_GGAAAUUU_______CGCCGUG\n______________||||:||::_||:::_||||||:|_______||||||:\n______________UGACGCGGU_GUGGU_CCUUUAGA_______GCGGCAU\n3'-UUU...GCUUA_________U_____C________ACCGAC________UUAAU...GUG-5'\n_____________|______________________________________|\n_____________87_____________________________________49\n |
260 -- 266 |
50 -- 56 |
-33.8437 kcal/mol |
9.99136 kcal/mol |
16.8518 kcal/mol |
228 267@LB@ | |@LB@5'-CGC...AGCCG C C AUAACCA UUGUA...CGG-3'@LB@ ACUGUGCUG CAUUG GGAAAUUU CGCCGUG@LB@ ||||:||:: ||::: ||||||:| ||||||:@LB@ UGACGCGGU GUGGU CCUUUAGA GCGGCAU@LB@3'-UUU...GCUUA U C ACCGAC UUAAU...GUG-5'@LB@ | |@LB@ 87 49@LB@@LB@@LB@Energy -7.00 kcal/mol@LB@Hybridization Energy -33.8437 kcal/mol@LB@Unfolding Energy - mRNA 9.99136 kcal/mol@LB@Unfolding Energy - sRNA 16.8518 kcal/mol@LB@@LB@Position - mRNA 229 -- 266@LB@Position - sRNA 50 -- 86@LB@Position Seed - mRNA 260 -- 266@LB@Position Seed - sRNA 50 -- 56@LB@ |
| 3 |
3.071e-06 |
0.003055 |
b2100 |
yegV |
-9.35 |
0.183884 |
5 -- 14 |
51 -- 60 |
putative kinase |
|
_____________4__________15\n_____________|__________|\n_______5'-AAUC__________CCUGU...CUU-3'\n______________GCUGCGCCGU\n______________||||||||||\n______________CGACGCGGCA\n3'-UUU...AGAAC__________UUUAA...GUG-5'\n_____________|__________|\n_____________61_________50\n |
8 -- 14 |
51 -- 57 |
-21.1769 kcal/mol |
6.95722 kcal/mol |
4.87294 kcal/mol |
4 15@LB@ | |@LB@ 5'-AAUC CCUGU...CUU-3'@LB@ GCUGCGCCGU@LB@ ||||||||||@LB@ CGACGCGGCA@LB@3'-UUU...AGAAC UUUAA...GUG-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -9.35 kcal/mol@LB@Hybridization Energy -21.1769 kcal/mol@LB@Unfolding Energy - mRNA 6.95722 kcal/mol@LB@Unfolding Energy - sRNA 4.87294 kcal/mol@LB@@LB@Position - mRNA 5 -- 14@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 8 -- 14@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 60 |
0.003031 |
0.1727 |
b3432 |
glgB |
-10.57 |
0.108575 |
114 -- 123 |
51 -- 60 |
1 4-alpha-glucan branching enzyme |
|
_____________113________124\n_____________|__________|\n5'-CAU...AGAGU__________UCAGG...GAC-3'\n______________GCUGCGCCGU\n______________||||||||||\n______________CGACGCGGCA\n3'-UUU...AGAAC__________UUUAA...GUG-5'\n_____________|__________|\n_____________61_________50\n |
117 -- 123 |
51 -- 57 |
-20.705 kcal/mol |
5.26394 kcal/mol |
4.87294 kcal/mol |
113 124@LB@ | |@LB@5'-CAU...AGAGU UCAGG...GAC-3'@LB@ GCUGCGCCGU@LB@ ||||||||||@LB@ CGACGCGGCA@LB@3'-UUU...AGAAC UUUAA...GUG-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -10.57 kcal/mol@LB@Hybridization Energy -20.705 kcal/mol@LB@Unfolding Energy - mRNA 5.26394 kcal/mol@LB@Unfolding Energy - sRNA 4.87294 kcal/mol@LB@@LB@Position - mRNA 114 -- 123@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 117 -- 123@LB@Position Seed - sRNA 51 -- 57@LB@ |
