38 |
0.002093 |
0.1727 |
b1174 |
minE |
-11.55 |
0.070176 |
37 -- 55 |
69 -- 87 |
cell division topological specificity factor |
|
_____________36___________________56\n_____________|____________________|\n5'-AAC...AGUAU_________UCUA_______UGAAC...AUG-3'\n______________UGC_GCGCC____ACCAGGG\n______________|:|_|||||____|||||||\n______________AUG_CGCGG____UGGUCCC\n3'-UUU...CGCUU___A_____UUG________UUUAG...GUG-5'\n_____________|____________________|\n_____________88___________________68\n |
49 -- 55 |
69 -- 75 |
-25.7186 kcal/mol |
6.79304 kcal/mol |
7.3743 kcal/mol |
36 56@LB@ | |@LB@5'-AAC...AGUAU UCUA UGAAC...AUG-3'@LB@ UGC GCGCC ACCAGGG@LB@ |:| ||||| |||||||@LB@ AUG CGCGG UGGUCCC@LB@3'-UUU...CGCUU A UUG UUUAG...GUG-5'@LB@ | |@LB@ 88 68@LB@@LB@@LB@Energy -11.55 kcal/mol@LB@Hybridization Energy -25.7186 kcal/mol@LB@Unfolding Energy - mRNA 6.79304 kcal/mol@LB@Unfolding Energy - sRNA 7.3743 kcal/mol@LB@@LB@Position - mRNA 37 -- 55@LB@Position - sRNA 69 -- 87@LB@Position Seed - mRNA 49 -- 55@LB@Position Seed - sRNA 69 -- 75@LB@ |
65 |
0.003263 |
0.1727 |
b2584 |
pka |
-7.67 |
0.359085 |
49 -- 62 |
69 -- 82 |
protein lysine acetyltransferase |
|
_____________48_____________63\n_____________|______________|\n5'-AGG...AUGGC__G___________CGGCG...GUA-3'\n______________CG_CGAUACCGGGG\n______________||_|:|:|||:|||\n______________GC_GUUGUGGUCCC\n3'-UUU...AUGAC__G___________UUUAG...GUG-5'\n_____________|______________|\n_____________83_____________68\n |
56 -- 62 |
69 -- 75 |
-21.7159 kcal/mol |
7.18281 kcal/mol |
6.85849 kcal/mol |
48 63@LB@ | |@LB@5'-AGG...AUGGC G CGGCG...GUA-3'@LB@ CG CGAUACCGGGG@LB@ || |:|:|||:|||@LB@ GC GUUGUGGUCCC@LB@3'-UUU...AUGAC G UUUAG...GUG-5'@LB@ | |@LB@ 83 68@LB@@LB@@LB@Energy -7.67 kcal/mol@LB@Hybridization Energy -21.7159 kcal/mol@LB@Unfolding Energy - mRNA 7.18281 kcal/mol@LB@Unfolding Energy - sRNA 6.85849 kcal/mol@LB@@LB@Position - mRNA 49 -- 62@LB@Position - sRNA 69 -- 82@LB@Position Seed - mRNA 56 -- 62@LB@Position Seed - sRNA 69 -- 75@LB@ |
161 |
0.009429 |
0.2062 |
b1372 |
stfR |
-7.17 |
0.431291 |
283 -- 297 |
69 -- 83 |
Rac prophage; putative tail fiber protein |
b1547 |
_____________282_____________298\n_____________|_______________|\n5'-CAC...AAAAC__AA________C__UGG-3'\n______________GU__CAGCACCA_GG\n______________|:__||:|||||_||\n______________CG__GUUGUGGU_CC\n3'-UUU...UAUGA__CG________C__UUUAG...GUG-5'\n_____________|_______________|\n_____________84______________68\n |
288 -- 294 |
72 -- 78 |
-17.3245 kcal/mol |
2.81769 kcal/mol |
7.33837 kcal/mol |
282 298@LB@ | |@LB@5'-CAC...AAAAC AA C UGG-3'@LB@ GU CAGCACCA GG@LB@ |: ||:||||| ||@LB@ CG GUUGUGGU CC@LB@3'-UUU...UAUGA CG C UUUAG...GUG-5'@LB@ | |@LB@ 84 68@LB@@LB@@LB@Energy -7.17 kcal/mol@LB@Hybridization Energy -17.3245 kcal/mol@LB@Unfolding Energy - mRNA 2.81769 kcal/mol@LB@Unfolding Energy - sRNA 7.33837 kcal/mol@LB@@LB@Position - mRNA 283 -- 297@LB@Position - sRNA 69 -- 83@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 72 -- 78@LB@ |
176 |
0.01044 |
0.208 |
b0933 |
ssuB |
-9.69 |
0.158756 |
203 -- 226 |
69 -- 90 |
aliphatic sulfonate ABC transporter ATPase |
|
_____________202______________________227\n_____________|________________________|\n5'-AUU...GGUAU_________UC___UGA_______CACGC...AUA-3'\n______________GAAUACUGC__GUC___ACCAGGG\n______________|||||||||__|:|___|||||||\n______________CUUAUGACG__CGG___UGGUCCC\n3'-UUU...ACGCG______________UUG_______UUUAG...GUG-5'\n_____________|________________________|\n_____________91_______________________68\n |
220 -- 226 |
69 -- 75 |
-28.101 kcal/mol |
8.24441 kcal/mol |
10.1628 kcal/mol |
202 227@LB@ | |@LB@5'-AUU...GGUAU UC UGA CACGC...AUA-3'@LB@ GAAUACUGC GUC ACCAGGG@LB@ ||||||||| |:| |||||||@LB@ CUUAUGACG CGG UGGUCCC@LB@3'-UUU...ACGCG UUG UUUAG...GUG-5'@LB@ | |@LB@ 91 68@LB@@LB@@LB@Energy -9.69 kcal/mol@LB@Hybridization Energy -28.101 kcal/mol@LB@Unfolding Energy - mRNA 8.24441 kcal/mol@LB@Unfolding Energy - sRNA 10.1628 kcal/mol@LB@@LB@Position - mRNA 203 -- 226@LB@Position - sRNA 69 -- 90@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 69 -- 75@LB@ |
8 |
0.000265 |
0.1166 |
b1244 |
oppB |
-12.83 |
0.039495 |
280 -- 295 |
70 -- 84 |
oligopeptide ABC transporter permease |
|
_____________279______________296\n_____________|________________|\n5'-UCC...UAUGA______UC________AAGCC-3'\n______________UGCGCC__GCGCCGGG\n______________||||||__:|:||:||\n______________ACGCGG__UGUGGUCC\n3'-UUU...UUAUG______U_________CUUUA...GUG-5'\n_____________|________________|\n_____________85_______________69\n |
289 -- 295 |
70 -- 76 |
-25.4509 kcal/mol |
5.37602 kcal/mol |
7.24859 kcal/mol |
279 296@LB@ | |@LB@5'-UCC...UAUGA UC AAGCC-3'@LB@ UGCGCC GCGCCGGG@LB@ |||||| :|:||:||@LB@ ACGCGG UGUGGUCC@LB@3'-UUU...UUAUG U CUUUA...GUG-5'@LB@ | |@LB@ 85 69@LB@@LB@@LB@Energy -12.83 kcal/mol@LB@Hybridization Energy -25.4509 kcal/mol@LB@Unfolding Energy - mRNA 5.37602 kcal/mol@LB@Unfolding Energy - sRNA 7.24859 kcal/mol@LB@@LB@Position - mRNA 280 -- 295@LB@Position - sRNA 70 -- 84@LB@Position Seed - mRNA 289 -- 295@LB@Position Seed - sRNA 70 -- 76@LB@ |
17 |
0.0008046 |
0.1666 |
b0590 |
fepD |
-14.87 |
0.015550 |
17 -- 43 |
70 -- 94 |
ferrienterobactin ABC transporter permease |
|
_____________16__________________________44\n_____________|___________________________|\n5'-AAU...AACGA___AG___________GA_________UGCGU...AAU-3'\n______________GCG__GAAUACUGCGC__AACGCCGGG\n______________|||__|||||||||||__|||:||:||\n______________CGC__CUUAUGACGCG__UUGUGGUCC\n3'-UUU...CCCCA___G____________G__________CUUUA...GUG-5'\n_____________|___________________________|\n_____________95__________________________69\n |
37 -- 43 |
70 -- 76 |
-38.1858 kcal/mol |
10.2318 kcal/mol |
13.036 kcal/mol |
16 44@LB@ | |@LB@5'-AAU...AACGA AG GA UGCGU...AAU-3'@LB@ GCG GAAUACUGCGC AACGCCGGG@LB@ ||| ||||||||||| |||:||:||@LB@ CGC CUUAUGACGCG UUGUGGUCC@LB@3'-UUU...CCCCA G G CUUUA...GUG-5'@LB@ | |@LB@ 95 69@LB@@LB@@LB@Energy -14.87 kcal/mol@LB@Hybridization Energy -38.1858 kcal/mol@LB@Unfolding Energy - mRNA 10.2318 kcal/mol@LB@Unfolding Energy - sRNA 13.036 kcal/mol@LB@@LB@Position - mRNA 17 -- 43@LB@Position - sRNA 70 -- 94@LB@Position Seed - mRNA 37 -- 43@LB@Position Seed - sRNA 70 -- 76@LB@ |
31 |
0.001682 |
0.1727 |
b1887 |
cheW |
-12.93 |
0.037697 |
13 -- 28 |
70 -- 86 |
purine-binding chemotaxis protein |
|
_____________12________________29\n_____________|_________________|\n5'-GUG...AAUUA_________________UUGUG...UCC-3'\n______________AUUG_GUCAACACCAGG\n______________|:||_|:||||||||||\n______________UGAC_CGGUUGUGGUCC\n3'-UUU...GCUUA____G____________CUUUA...GUG-5'\n_____________|_________________|\n_____________87________________69\n |
22 -- 28 |
70 -- 76 |
-24.746 kcal/mol |
4.53921 kcal/mol |
7.27772 kcal/mol |
12 29@LB@ | |@LB@5'-GUG...AAUUA UUGUG...UCC-3'@LB@ AUUG GUCAACACCAGG@LB@ |:|| |:||||||||||@LB@ UGAC CGGUUGUGGUCC@LB@3'-UUU...GCUUA G CUUUA...GUG-5'@LB@ | |@LB@ 87 69@LB@@LB@@LB@Energy -12.93 kcal/mol@LB@Hybridization Energy -24.746 kcal/mol@LB@Unfolding Energy - mRNA 4.53921 kcal/mol@LB@Unfolding Energy - sRNA 7.27772 kcal/mol@LB@@LB@Position - mRNA 13 -- 28@LB@Position - sRNA 70 -- 86@LB@Position Seed - mRNA 22 -- 28@LB@Position Seed - sRNA 70 -- 76@LB@ |
42 |
0.002147 |
0.1727 |
b0082 |
rsmH |
-13.18 |
0.033634 |
23 -- 49 |
70 -- 94 |
16S rRNA m(4)C1402 methyltransferase SAM-dependent |
|
_____________22__________________________50\n_____________|___________________________|\n5'-UGG...UAAUC____C_________G____AU______CUGAC...GUC-3'\n______________GCGC_AGUACUGCG_CAAC__GCCGGG\n______________||||_|:|||||||_||||__:||:||\n______________CGCG_UUAUGACGC_GUUG__UGGUCC\n3'-UUU...CCCCA____C_________G____________CUUUA...GUG-5'\n_____________|___________________________|\n_____________95__________________________69\n |
30 -- 36 |
81 -- 87 |
-36.7334 kcal/mol |
10.4772 kcal/mol |
13.036 kcal/mol |
22 50@LB@ | |@LB@5'-UGG...UAAUC C G AU CUGAC...GUC-3'@LB@ GCGC AGUACUGCG CAAC GCCGGG@LB@ |||| |:||||||| |||| :||:||@LB@ CGCG UUAUGACGC GUUG UGGUCC@LB@3'-UUU...CCCCA C G CUUUA...GUG-5'@LB@ | |@LB@ 95 69@LB@@LB@@LB@Energy -13.18 kcal/mol@LB@Hybridization Energy -36.7334 kcal/mol@LB@Unfolding Energy - mRNA 10.4772 kcal/mol@LB@Unfolding Energy - sRNA 13.036 kcal/mol@LB@@LB@Position - mRNA 23 -- 49@LB@Position - sRNA 70 -- 94@LB@Position Seed - mRNA 30 -- 36@LB@Position Seed - sRNA 81 -- 87@LB@ |
63 |
0.003148 |
0.1727 |
b0131 |
panD |
-12.33 |
0.049519 |
276 -- 291 |
70 -- 84 |
aspartate 1-decarboxylase |
|
_____________275______________292\n_____________|________________|\n5'-AUU...GUUCU_______UUG______AUUUU...UUG-3'\n______________UGCGCCA___ACCAGG\n______________|||||||___||||||\n______________ACGCGGU___UGGUCC\n3'-UUU...UUAUG_______UG_______CUUUA...GUG-5'\n_____________|________________|\n_____________85_______________69\n |
276 -- 282 |
78 -- 84 |
-24.0598 kcal/mol |
4.4848 kcal/mol |
7.24859 kcal/mol |
275 292@LB@ | |@LB@5'-AUU...GUUCU UUG AUUUU...UUG-3'@LB@ UGCGCCA ACCAGG@LB@ ||||||| ||||||@LB@ ACGCGGU UGGUCC@LB@3'-UUU...UUAUG UG CUUUA...GUG-5'@LB@ | |@LB@ 85 69@LB@@LB@@LB@Energy -12.33 kcal/mol@LB@Hybridization Energy -24.0598 kcal/mol@LB@Unfolding Energy - mRNA 4.4848 kcal/mol@LB@Unfolding Energy - sRNA 7.24859 kcal/mol@LB@@LB@Position - mRNA 276 -- 291@LB@Position - sRNA 70 -- 84@LB@Position Seed - mRNA 276 -- 282@LB@Position Seed - sRNA 78 -- 84@LB@ |
64 |
0.003238 |
0.1727 |
b2578 |
eamB |
-8.70 |
0.240388 |
240 -- 262 |
70 -- 85 |
cysteine and O-acetylserine exporter |
|
_____________239_____________________263\n_____________|_______________________|\n5'-GUC...ACACC___AUUAC____AU_________ACCGA...CGC-3'\n______________CUG_____CGCU__GACGCCAGG\n______________|||_____|||:__:||:|||||\n______________GAC_____GCGG__UUGUGGUCC\n3'-UUU...CUUAU_______________________CUUUA...GUG-5'\n_____________|_______________________|\n_____________86______________________69\n |
256 -- 262 |
70 -- 76 |
-20.6717 kcal/mol |
4.69447 kcal/mol |
7.27689 kcal/mol |
239 263@LB@ | |@LB@5'-GUC...ACACC AUUAC AU ACCGA...CGC-3'@LB@ CUG CGCU GACGCCAGG@LB@ ||| |||: :||:|||||@LB@ GAC GCGG UUGUGGUCC@LB@3'-UUU...CUUAU CUUUA...GUG-5'@LB@ | |@LB@ 86 69@LB@@LB@@LB@Energy -8.70 kcal/mol@LB@Hybridization Energy -20.6717 kcal/mol@LB@Unfolding Energy - mRNA 4.69447 kcal/mol@LB@Unfolding Energy - sRNA 7.27689 kcal/mol@LB@@LB@Position - mRNA 240 -- 262@LB@Position - sRNA 70 -- 85@LB@Position Seed - mRNA 256 -- 262@LB@Position Seed - sRNA 70 -- 76@LB@ |