73 |
0.003782 |
0.1804 |
b3560 |
glyQ |
-10.80 |
0.098141 |
7 -- 31 |
51 -- 74 |
glycine tRNA synthetase alpha subunit |
|
_____________6__________________________32\n_____________|__________________________|\n_____5'-ACAGUU____________A__AAA_____G__UAUAC...UGG-3'\n______________CCAGGGAAG_CU_UG___UGCGC_GU\n______________||||||||:_||_||___|||||_||\n______________GGUCCCUUU_GA_AC___ACGCG_CA\n3'-UUU...GUUGU_________A_____CG______G__UUUAA...GUG-5'\n_____________|__________________________|\n_____________75_________________________50\n |
9 -- 15 |
66 -- 72 |
-27.2651 kcal/mol |
7.67928 kcal/mol |
8.78847 kcal/mol |
6 32@LB@ | |@LB@ 5'-ACAGUU A AAA G UAUAC...UGG-3'@LB@ CCAGGGAAG CU UG UGCGC GU@LB@ ||||||||: || || ||||| ||@LB@ GGUCCCUUU GA AC ACGCG CA@LB@3'-UUU...GUUGU A CG G UUUAA...GUG-5'@LB@ | |@LB@ 75 50@LB@@LB@@LB@Energy -10.80 kcal/mol@LB@Hybridization Energy -27.2651 kcal/mol@LB@Unfolding Energy - mRNA 7.67928 kcal/mol@LB@Unfolding Energy - sRNA 8.78847 kcal/mol@LB@@LB@Position - mRNA 7 -- 31@LB@Position - sRNA 51 -- 74@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 66 -- 72@LB@ |
104 |
0.005642 |
0.1855 |
b1476 |
fdnI |
-8.74 |
0.236866 |
280 -- 291 |
51 -- 62 |
formate dehydrogenase-N cytochrome B556 (gamma) subunit nitrate-inducible |
|
_____________279__________292\n_____________|____________|\n5'-CGU...CUUCC____G_______CCGGG...UUU-3'\n______________UGGU_GCGCUGU\n______________|||:_||||:||\n______________ACCG_CGCGGCA\n3'-UUU...UUAGA____A_______UUUAA...GUG-5'\n_____________|____________|\n_____________63___________50\n |
285 -- 291 |
51 -- 57 |
-16.7644 kcal/mol |
3.14516 kcal/mol |
4.8826 kcal/mol |
279 292@LB@ | |@LB@5'-CGU...CUUCC G CCGGG...UUU-3'@LB@ UGGU GCGCUGU@LB@ |||: ||||:||@LB@ ACCG CGCGGCA@LB@3'-UUU...UUAGA A UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -8.74 kcal/mol@LB@Hybridization Energy -16.7644 kcal/mol@LB@Unfolding Energy - mRNA 3.14516 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 280 -- 291@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 285 -- 291@LB@Position Seed - sRNA 51 -- 57@LB@ |
124 |
0.006738 |
0.1913 |
b2533 |
suhB |
-10.44 |
0.114821 |
158 -- 166 |
51 -- 59 |
inositol monophosphatase |
|
_____________157_______167\n_____________|_________|\n5'-UUG...AUACU_________UUUCC...AGA-3'\n______________CUGCGCCGU\n______________|||||||||\n______________GACGCGGCA\n3'-UUU...GAACC_________UUUAA...GUG-5'\n_____________|_________|\n_____________60________50\n |
160 -- 166 |
51 -- 57 |
-17.2912 kcal/mol |
2.02049 kcal/mol |
4.83013 kcal/mol |
157 167@LB@ | |@LB@5'-UUG...AUACU UUUCC...AGA-3'@LB@ CUGCGCCGU@LB@ |||||||||@LB@ GACGCGGCA@LB@3'-UUU...GAACC UUUAA...GUG-5'@LB@ | |@LB@ 60 50@LB@@LB@@LB@Energy -10.44 kcal/mol@LB@Hybridization Energy -17.2912 kcal/mol@LB@Unfolding Energy - mRNA 2.02049 kcal/mol@LB@Unfolding Energy - sRNA 4.83013 kcal/mol@LB@@LB@Position - mRNA 158 -- 166@LB@Position - sRNA 51 -- 59@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 51 -- 57@LB@ |
127 |
0.007097 |
0.1961 |
b4065 |
yjcE |
-10.62 |
0.105957 |
81 -- 91 |
51 -- 62 |
putative cation/proton antiporter |
|
_____________80___________92\n_____________|____________|\n5'-UAU...GGCAA____________UUUUA...UGC-3'\n______________UGGCUGC_CCGU\n______________|||||||_||||\n______________ACCGACG_GGCA\n3'-UUU...UUAGA_______C____UUUAA...GUG-5'\n_____________|____________|\n_____________63___________50\n |
81 -- 87 |
56 -- 62 |
-18.8543 kcal/mol |
3.34811 kcal/mol |
4.8826 kcal/mol |
80 92@LB@ | |@LB@5'-UAU...GGCAA UUUUA...UGC-3'@LB@ UGGCUGC CCGU@LB@ ||||||| ||||@LB@ ACCGACG GGCA@LB@3'-UUU...UUAGA C UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -10.62 kcal/mol@LB@Hybridization Energy -18.8543 kcal/mol@LB@Unfolding Energy - mRNA 3.34811 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 81 -- 91@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 81 -- 87@LB@Position Seed - sRNA 56 -- 62@LB@ |
175 |
0.01031 |
0.2074 |
b1834 |
yebT |
-10.32 |
0.121003 |
270 -- 282 |
51 -- 62 |
MCE domain protein |
|
_____________269___________283\n_____________|_____________|\n5'-UCU...CUUUC_______U_____UCAUC...UUG-3'\n______________UGGCUGC_GCCGU\n______________|||||||_|||||\n______________ACCGACG_CGGCA\n3'-UUU...UUAGA_____________UUUAA...GUG-5'\n_____________|_____________|\n_____________63____________50\n |
270 -- 276 |
56 -- 62 |
-21.4836 kcal/mol |
6.28034 kcal/mol |
4.8826 kcal/mol |
269 283@LB@ | |@LB@5'-UCU...CUUUC U UCAUC...UUG-3'@LB@ UGGCUGC GCCGU@LB@ ||||||| |||||@LB@ ACCGACG CGGCA@LB@3'-UUU...UUAGA UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -10.32 kcal/mol@LB@Hybridization Energy -21.4836 kcal/mol@LB@Unfolding Energy - mRNA 6.28034 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 270 -- 282@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 56 -- 62@LB@ |
188 |
0.01115 |
0.2089 |
b4377 |
yjjU |
-9.16 |
0.198952 |
213 -- 243 |
51 -- 77 |
putative patatin-like family phospholipase |
|
_____________212______________________________244\n_____________|________________________________|\n5'-AGG...AGCGA_____UGUAACG_______AAUAU________UGUCG...GAC-3'\n______________AUACC________CUUGGU_____UGCGCCGU\n______________|:|||________|||||:_____||||||||\n______________UGUGG________GAACCG_____ACGCGGCA\n3'-UUU...GCGGU_____UCCCUUUA___________________UUUAA...GUG-5'\n_____________|________________________________|\n_____________78_______________________________50\n |
237 -- 243 |
51 -- 57 |
-26.4777 kcal/mol |
7.99131 kcal/mol |
9.32737 kcal/mol |
212 244@LB@ | |@LB@5'-AGG...AGCGA UGUAACG AAUAU UGUCG...GAC-3'@LB@ AUACC CUUGGU UGCGCCGU@LB@ |:||| |||||: ||||||||@LB@ UGUGG GAACCG ACGCGGCA@LB@3'-UUU...GCGGU UCCCUUUA UUUAA...GUG-5'@LB@ | |@LB@ 78 50@LB@@LB@@LB@Energy -9.16 kcal/mol@LB@Hybridization Energy -26.4777 kcal/mol@LB@Unfolding Energy - mRNA 7.99131 kcal/mol@LB@Unfolding Energy - sRNA 9.32737 kcal/mol@LB@@LB@Position - mRNA 213 -- 243@LB@Position - sRNA 51 -- 77@LB@Position Seed - mRNA 237 -- 243@LB@Position Seed - sRNA 51 -- 57@LB@ |
9 |
0.0003241 |
0.1198 |
b1110 |
ycfJ |
-9.50 |
0.172514 |
224 -- 251 |
52 -- 76 |
uncharacterized protein |
|
_____________223__________________________252\n_____________|____________________________|\n5'-ACU...GCGGG_______AUU__U___GCA_________GGCGU...AAU-3'\n______________UAUCGGG___GG_GUC___GCUGCGCUG\n______________:|:|:||___|:_:||___|||||||:|\n______________GUGGUCC___CU_UAG___CGACGCGGC\n3'-UUU...CGGUU____________U___AAC_________AUUUA...GUG-5'\n_____________|____________________________|\n_____________77___________________________51\n |
245 -- 251 |
52 -- 58 |
-26.6822 kcal/mol |
7.91875 kcal/mol |
9.26585 kcal/mol |
223 252@LB@ | |@LB@5'-ACU...GCGGG AUU U GCA GGCGU...AAU-3'@LB@ UAUCGGG GG GUC GCUGCGCUG@LB@ :|:|:|| |: :|| |||||||:|@LB@ GUGGUCC CU UAG CGACGCGGC@LB@3'-UUU...CGGUU U AAC AUUUA...GUG-5'@LB@ | |@LB@ 77 51@LB@@LB@@LB@Energy -9.50 kcal/mol@LB@Hybridization Energy -26.6822 kcal/mol@LB@Unfolding Energy - mRNA 7.91875 kcal/mol@LB@Unfolding Energy - sRNA 9.26585 kcal/mol@LB@@LB@Position - mRNA 224 -- 251@LB@Position - sRNA 52 -- 76@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 52 -- 58@LB@ |
26 |
0.001553 |
0.1727 |
b0853 |
ybjN |
-8.94 |
0.217650 |
161 -- 169 |
52 -- 60 |
negative regulator of motility; multicopy suppressor of coaA(Ts) |
|
_____________160_______170\n_____________|_________|\n5'-CGC...CGUAA_________GUCUU...AUC-3'\n______________GCUGUGCCG\n______________||||:||||\n______________CGACGCGGC\n3'-UUU...AGAAC_________AUUUA...GUG-5'\n_____________|_________|\n_____________61________51\n |
163 -- 169 |
52 -- 58 |
-18.9448 kcal/mol |
5.13325 kcal/mol |
4.86882 kcal/mol |
160 170@LB@ | |@LB@5'-CGC...CGUAA GUCUU...AUC-3'@LB@ GCUGUGCCG@LB@ ||||:||||@LB@ CGACGCGGC@LB@3'-UUU...AGAAC AUUUA...GUG-5'@LB@ | |@LB@ 61 51@LB@@LB@@LB@Energy -8.94 kcal/mol@LB@Hybridization Energy -18.9448 kcal/mol@LB@Unfolding Energy - mRNA 5.13325 kcal/mol@LB@Unfolding Energy - sRNA 4.86882 kcal/mol@LB@@LB@Position - mRNA 161 -- 169@LB@Position - sRNA 52 -- 60@LB@Position Seed - mRNA 163 -- 169@LB@Position Seed - sRNA 52 -- 58@LB@ |
49 |
0.00252 |
0.1727 |
b3452 |
ugpA |
-14.40 |
0.019328 |
59 -- 78 |
52 -- 70 |
sn-glycerol-3-phosphate ABC transporter permease |
|
_____________58___________________79\n_____________|____________________|\n5'-GAG...AGCGU_______AGUU_________CUUUG...CGG-3'\n______________GGAAAUC____GCUGCGCCG\n______________|||||||____|||||||||\n______________CCUUUAG____CGACGCGGC\n3'-UUU...UGGUC_______AAC__________AUUUA...GUG-5'\n_____________|____________________|\n_____________71___________________51\n |
72 -- 78 |
52 -- 58 |
-27.9409 kcal/mol |
6.69662 kcal/mol |
6.84683 kcal/mol |
58 79@LB@ | |@LB@5'-GAG...AGCGU AGUU CUUUG...CGG-3'@LB@ GGAAAUC GCUGCGCCG@LB@ ||||||| |||||||||@LB@ CCUUUAG CGACGCGGC@LB@3'-UUU...UGGUC AAC AUUUA...GUG-5'@LB@ | |@LB@ 71 51@LB@@LB@@LB@Energy -14.40 kcal/mol@LB@Hybridization Energy -27.9409 kcal/mol@LB@Unfolding Energy - mRNA 6.69662 kcal/mol@LB@Unfolding Energy - sRNA 6.84683 kcal/mol@LB@@LB@Position - mRNA 59 -- 78@LB@Position - sRNA 52 -- 70@LB@Position Seed - mRNA 72 -- 78@LB@Position Seed - sRNA 52 -- 58@LB@ |
61 |
0.003042 |
0.1727 |
b0104 |
guaC |
-6.79 |
0.490983 |
117 -- 124 |
52 -- 59 |
GMP reductase |
|
_____________116______125\n_____________|________|\n5'-AUG...CAGUC________CAUUG...GUC-3'\n______________UUGCGCCG\n______________:|||||||\n______________GACGCGGC\n3'-UUU...GAACC________AUUUA...GUG-5'\n_____________|________|\n_____________60_______51\n |
118 -- 124 |
52 -- 58 |
-14.4979 kcal/mol |
2.89251 kcal/mol |
4.81798 kcal/mol |
116 125@LB@ | |@LB@5'-AUG...CAGUC CAUUG...GUC-3'@LB@ UUGCGCCG@LB@ :|||||||@LB@ GACGCGGC@LB@3'-UUU...GAACC AUUUA...GUG-5'@LB@ | |@LB@ 60 51@LB@@LB@@LB@Energy -6.79 kcal/mol@LB@Hybridization Energy -14.4979 kcal/mol@LB@Unfolding Energy - mRNA 2.89251 kcal/mol@LB@Unfolding Energy - sRNA 4.81798 kcal/mol@LB@@LB@Position - mRNA 117 -- 124@LB@Position - sRNA 52 -- 59@LB@Position Seed - mRNA 118 -- 124@LB@Position Seed - sRNA 52 -- 58@LB@ |