| 135 |
0.02628 |
0.6177 |
b3547 |
yhjX |
-9.70 |
0.047334 |
158 -- 184 |
28 -- 55 |
pyruvate-inducible inner membrane protein putative transporter |
|
_____________157___________________________185\n_____________|_____________________________|\n5'-UAA...UGGUU_____C____AUU____C___________CUGCA...UUA-3'\n______________GUCGG_AGAG___UUUC___UUUUUAUUA\n______________|||::_||||___||||___|||||||||\n______________CAGUU_UCUC___AAAG___AAAAAUAAU\n3'-UUU...CCGGG__________CUU____UAA_________AAUAC...ACA-5'\n_____________|_____________________________|\n_____________56____________________________27\n |
178 -- 184 |
28 -- 34 |
-15.2509 kcal/mol |
4.36169 kcal/mol |
1.18814 kcal/mol |
157 185@LB@ | |@LB@5'-UAA...UGGUU C AUU C CUGCA...UUA-3'@LB@ GUCGG AGAG UUUC UUUUUAUUA@LB@ |||:: |||| |||| |||||||||@LB@ CAGUU UCUC AAAG AAAAAUAAU@LB@3'-UUU...CCGGG CUU UAA AAUAC...ACA-5'@LB@ | |@LB@ 56 27@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -15.2509 kcal/mol@LB@Unfolding Energy - mRNA 4.36169 kcal/mol@LB@Unfolding Energy - sRNA 1.18814 kcal/mol@LB@@LB@Position - mRNA 158 -- 184@LB@Position - sRNA 28 -- 55@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 28 -- 34@LB@ |
| 144 |
0.02798 |
0.6177 |
b0682 |
chiQ |
-9.70 |
0.047426 |
184 -- 197 |
41 -- 56 |
chitosugar-induced verified lipoprotein |
|
_____________183______________198\n_____________|________________|\n5'-CGG...CCGCA____U___________GCUAU...ACA-3'\n______________CGUU___GAGGAAUUU\n______________|||:___|||||||||\n______________GCAG___CUCCUUAAA\n3'-UUU...ACCGG____UUU_________GUAAA...ACA-5'\n_____________|________________|\n_____________57_______________40\n |
191 -- 197 |
41 -- 47 |
-13.1137 kcal/mol |
2.46147 kcal/mol |
0.955312 kcal/mol |
183 198@LB@ | |@LB@5'-CGG...CCGCA U GCUAU...ACA-3'@LB@ CGUU GAGGAAUUU@LB@ |||: |||||||||@LB@ GCAG CUCCUUAAA@LB@3'-UUU...ACCGG UUU GUAAA...ACA-5'@LB@ | |@LB@ 57 40@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -13.1137 kcal/mol@LB@Unfolding Energy - mRNA 2.46147 kcal/mol@LB@Unfolding Energy - sRNA 0.955312 kcal/mol@LB@@LB@Position - mRNA 184 -- 197@LB@Position - sRNA 41 -- 56@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 62 |
0.01306 |
0.6177 |
b4034 |
malE |
-9.62 |
0.049140 |
112 -- 120 |
45 -- 53 |
maltose transporter subunit |
|
_____________111_______121\n_____________|_________|\n5'-AGG...AGGGG_________UGGAA...UGG-3'\n______________CAAGGAGGA\n______________|||:|||||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
114 -- 120 |
45 -- 51 |
-12.5673 kcal/mol |
2.02865 kcal/mol |
0.917553 kcal/mol |
111 121@LB@ | |@LB@5'-AGG...AGGGG UGGAA...UGG-3'@LB@ CAAGGAGGA@LB@ |||:|||||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -9.62 kcal/mol@LB@Hybridization Energy -12.5673 kcal/mol@LB@Unfolding Energy - mRNA 2.02865 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 112 -- 120@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 114 -- 120@LB@Position Seed - sRNA 45 -- 51@LB@ |
| 55 |
0.01149 |
0.6177 |
b3287 |
def |
-9.61 |
0.049470 |
133 -- 146 |
41 -- 54 |
peptide deformylase |
|
_____________132____________147\n_____________|______________|\n5'-AUA...GUCAA______________GUCUA...AUG-3'\n______________UCAGAGGGGGAUUU\n______________|||:||:||:||||\n______________AGUUUCUCCUUAAA\n3'-UUU...CGGGC______________GUAAA...ACA-5'\n_____________|______________|\n_____________55_____________40\n |
140 -- 146 |
41 -- 47 |
-17.2173 kcal/mol |
6.66439 kcal/mol |
0.946064 kcal/mol |
132 147@LB@ | |@LB@5'-AUA...GUCAA GUCUA...AUG-3'@LB@ UCAGAGGGGGAUUU@LB@ |||:||:||:||||@LB@ AGUUUCUCCUUAAA@LB@3'-UUU...CGGGC GUAAA...ACA-5'@LB@ | |@LB@ 55 40@LB@@LB@@LB@Energy -9.61 kcal/mol@LB@Hybridization Energy -17.2173 kcal/mol@LB@Unfolding Energy - mRNA 6.66439 kcal/mol@LB@Unfolding Energy - sRNA 0.946064 kcal/mol@LB@@LB@Position - mRNA 133 -- 146@LB@Position - sRNA 41 -- 54@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 178 |
0.03627 |
0.6177 |
b0924 |
mukB |
-9.59 |
0.049840 |
186 -- 195 |
44 -- 53 |
chromosome condensin MukBEF ATPase and DNA-binding subunit |
|
_____________185________196\n_____________|__________|\n5'-UGG...GAUAG__________GAAUA...CUG-3'\n______________CGGAGAGGAA\n______________|::|||||||\n______________GUUUCUCCUU\n3'-UUU...GGGCA__________AAAGU...ACA-5'\n_____________|__________|\n_____________54_________43\n |
189 -- 195 |
44 -- 50 |
-13.8471 kcal/mol |
3.32824 kcal/mol |
0.927997 kcal/mol |
185 196@LB@ | |@LB@5'-UGG...GAUAG GAAUA...CUG-3'@LB@ CGGAGAGGAA@LB@ |::|||||||@LB@ GUUUCUCCUU@LB@3'-UUU...GGGCA AAAGU...ACA-5'@LB@ | |@LB@ 54 43@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -13.8471 kcal/mol@LB@Unfolding Energy - mRNA 3.32824 kcal/mol@LB@Unfolding Energy - sRNA 0.927997 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 44 -- 53@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 17 |
0.003407 |
0.593 |
b3607 |
cysE |
-9.56 |
0.050591 |
4 -- 44 |
27 -- 56 |
serine acetyltransferase |
|
_____________3__________________________________________45\n_____________|__________________________________________|\n________5'-CGG_______AUGCCAAUAACC______A_____CAAG_______AUUGC...CGA-3'\n______________CGUUGAA____________GAGGAA_UUUAU_____UAUUAU\n______________|||::||____________||||||_||:||_____||||||\n______________GCAGUUU____________CUCCUU_AAGUA_____AUAAUA\n3'-UUU...ACCGG_________________________A_____AAAAA______AUACG...ACA-5'\n_____________|__________________________________________|\n_____________57_________________________________________26\n |
4 -- 10 |
50 -- 56 |
-14.2001 kcal/mol |
3.44433 kcal/mol |
1.19682 kcal/mol |
3 45@LB@ | |@LB@ 5'-CGG AUGCCAAUAACC A CAAG AUUGC...CGA-3'@LB@ CGUUGAA GAGGAA UUUAU UAUUAU@LB@ |||::|| |||||| ||:|| ||||||@LB@ GCAGUUU CUCCUU AAGUA AUAAUA@LB@3'-UUU...ACCGG A AAAAA AUACG...ACA-5'@LB@ | |@LB@ 57 26@LB@@LB@@LB@Energy -9.56 kcal/mol@LB@Hybridization Energy -14.2001 kcal/mol@LB@Unfolding Energy - mRNA 3.44433 kcal/mol@LB@Unfolding Energy - sRNA 1.19682 kcal/mol@LB@@LB@Position - mRNA 4 -- 44@LB@Position - sRNA 27 -- 56@LB@Position Seed - mRNA 4 -- 10@LB@Position Seed - sRNA 50 -- 56@LB@ |
| 47 |
0.009275 |
0.6129 |
b3412 |
bioH |
-9.55 |
0.050822 |
229 -- 245 |
38 -- 55 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________228_________________246\n_____________|___________________|\n5'-GGC...CAAAG_____________G_____CUUGU...ACG-3'\n______________GUC__AGGGGAAU_UUCAU\n______________|||__||:|||||_|||||\n______________CAG__UCUCCUUA_AAGUA\n3'-UUU...CCGGG___UU______________AAAAA...ACA-5'\n_____________|___________________|\n_____________56__________________37\n |
233 -- 239 |
43 -- 49 |
-15.7204 kcal/mol |
5.00086 kcal/mol |
1.17036 kcal/mol |
228 246@LB@ | |@LB@5'-GGC...CAAAG G CUUGU...ACG-3'@LB@ GUC AGGGGAAU UUCAU@LB@ ||| ||:||||| |||||@LB@ CAG UCUCCUUA AAGUA@LB@3'-UUU...CCGGG UU AAAAA...ACA-5'@LB@ | |@LB@ 56 37@LB@@LB@@LB@Energy -9.55 kcal/mol@LB@Hybridization Energy -15.7204 kcal/mol@LB@Unfolding Energy - mRNA 5.00086 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 229 -- 245@LB@Position - sRNA 38 -- 55@LB@Position Seed - mRNA 233 -- 239@LB@Position Seed - sRNA 43 -- 49@LB@ |
| 81 |
0.01751 |
0.6177 |
b2741 |
rpoS |
-9.52 |
0.051528 |
88 -- 101 |
44 -- 56 |
RNA polymerase sigma S (sigma 38) factor |
|
_____________87_____________102\n_____________|______________|\n5'-CGG...AAAUU_____C________AUCCG...AGG-3'\n______________CGUUA_AAGGGGAA\n______________|||:|_|||:||||\n______________GCAGU_UUCUCCUU\n3'-UUU...ACCGG______________AAAGU...ACA-5'\n_____________|______________|\n_____________57_____________43\n |
95 -- 101 |
44 -- 50 |
-13.0318 kcal/mol |
2.56318 kcal/mol |
0.948902 kcal/mol |
87 102@LB@ | |@LB@5'-CGG...AAAUU C AUCCG...AGG-3'@LB@ CGUUA AAGGGGAA@LB@ |||:| |||:||||@LB@ GCAGU UUCUCCUU@LB@3'-UUU...ACCGG AAAGU...ACA-5'@LB@ | |@LB@ 57 43@LB@@LB@@LB@Energy -9.52 kcal/mol@LB@Hybridization Energy -13.0318 kcal/mol@LB@Unfolding Energy - mRNA 2.56318 kcal/mol@LB@Unfolding Energy - sRNA 0.948902 kcal/mol@LB@@LB@Position - mRNA 88 -- 101@LB@Position - sRNA 44 -- 56@LB@Position Seed - mRNA 95 -- 101@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 83 |
0.0176 |
0.6177 |
b2457 |
eutM |
-9.48 |
0.052376 |
185 -- 194 |
44 -- 53 |
ethanolamine utilization protein putative carboxysome structural protein |
|
_____________184________195\n_____________|__________|\n5'-UAU...CCUGA__________AGCAC...UUA-3'\n______________UAAAGAGGAA\n______________:|||||||||\n______________GUUUCUCCUU\n3'-UUU...GGGCA__________AAAGU...ACA-5'\n_____________|__________|\n_____________54_________43\n |
188 -- 194 |
44 -- 50 |
-11.8586 kcal/mol |
1.44575 kcal/mol |
0.927997 kcal/mol |
184 195@LB@ | |@LB@5'-UAU...CCUGA AGCAC...UUA-3'@LB@ UAAAGAGGAA@LB@ :|||||||||@LB@ GUUUCUCCUU@LB@3'-UUU...GGGCA AAAGU...ACA-5'@LB@ | |@LB@ 54 43@LB@@LB@@LB@Energy -9.48 kcal/mol@LB@Hybridization Energy -11.8586 kcal/mol@LB@Unfolding Energy - mRNA 1.44575 kcal/mol@LB@Unfolding Energy - sRNA 0.927997 kcal/mol@LB@@LB@Position - mRNA 185 -- 194@LB@Position - sRNA 44 -- 53@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 134 |
0.02619 |
0.6177 |
b1126 |
potA |
-9.47 |
0.052791 |
285 -- 299 |
37 -- 55 |
spermidine/putrescine ABC transporter ATPase |
|
_____________284_________________300\n_____________|___________________|\n5'-CAA...UUGAU_GU________________C-3'\n______________G__AAAGAGG____UCAUU\n______________|__|||||||____|||||\n______________C__UUUCUCC____AGUAA\n3'-UUU...CCGGG_AG_______UUAA_____AAAAA...ACA-5'\n_____________|___________________|\n_____________56__________________36\n |
288 -- 294 |
46 -- 52 |
-11.4861 kcal/mol |
0.840334 kcal/mol |
1.17789 kcal/mol |
284 300@LB@ | |@LB@5'-CAA...UUGAU GU C-3'@LB@ G AAAGAGG UCAUU@LB@ | ||||||| |||||@LB@ C UUUCUCC AGUAA@LB@3'-UUU...CCGGG AG UUAA AAAAA...ACA-5'@LB@ | |@LB@ 56 36@LB@@LB@@LB@Energy -9.47 kcal/mol@LB@Hybridization Energy -11.4861 kcal/mol@LB@Unfolding Energy - mRNA 0.840334 kcal/mol@LB@Unfolding Energy - sRNA 1.17789 kcal/mol@LB@@LB@Position - mRNA 285 -- 299@LB@Position - sRNA 37 -- 55@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 46 -- 52@LB@ |
