142 |
0.02758 |
0.6177 |
b3186 |
rplU |
-10.01 |
0.040887 |
186 -- 200 |
38 -- 52 |
50S ribosomal subunit protein L21 |
|
_____________185_____________201\n_____________|_______________|\n5'-UUA...GCGCG____C__________AUGUA...UUG-3'\n______________GAAG_GGAGUUUUAU\n______________:|||_|||:|||:||\n______________UUUC_CCUUAAAGUA\n3'-UUU...GGCAG____U__________AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
194 -- 200 |
38 -- 44 |
-13.3778 kcal/mol |
2.29537 kcal/mol |
1.0693 kcal/mol |
185 201@LB@ | |@LB@5'-UUA...GCGCG C AUGUA...UUG-3'@LB@ GAAG GGAGUUUUAU@LB@ :||| |||:|||:||@LB@ UUUC CCUUAAAGUA@LB@3'-UUU...GGCAG U AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -10.01 kcal/mol@LB@Hybridization Energy -13.3778 kcal/mol@LB@Unfolding Energy - mRNA 2.29537 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 186 -- 200@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 194 -- 200@LB@Position Seed - sRNA 38 -- 44@LB@ |
100 |
0.01963 |
0.6177 |
b4001 |
yjaH |
-9.93 |
0.042585 |
215 -- 230 |
39 -- 53 |
DUF1481 family putative lipoprotein |
|
_____________214______________231\n_____________|________________|\n5'-UGG...UUUAA________U_______CCCCU...AUA-3'\n______________CGAAGGGG_GGUUUCA\n______________|:|||:||_::|||||\n______________GUUUCUCC_UUAAAGU\n3'-UUU...GGGCA________________AAAAA...ACA-5'\n_____________|________________|\n_____________54_______________38\n |
216 -- 222 |
46 -- 52 |
-15.2589 kcal/mol |
4.19806 kcal/mol |
1.13439 kcal/mol |
214 231@LB@ | |@LB@5'-UGG...UUUAA U CCCCU...AUA-3'@LB@ CGAAGGGG GGUUUCA@LB@ |:|||:|| ::|||||@LB@ GUUUCUCC UUAAAGU@LB@3'-UUU...GGGCA AAAAA...ACA-5'@LB@ | |@LB@ 54 38@LB@@LB@@LB@Energy -9.93 kcal/mol@LB@Hybridization Energy -15.2589 kcal/mol@LB@Unfolding Energy - mRNA 4.19806 kcal/mol@LB@Unfolding Energy - sRNA 1.13439 kcal/mol@LB@@LB@Position - mRNA 215 -- 230@LB@Position - sRNA 39 -- 53@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 46 -- 52@LB@ |
82 |
0.01753 |
0.6177 |
b2204 |
napH |
-9.88 |
0.043521 |
152 -- 162 |
42 -- 52 |
ferredoxin-type protein |
|
_____________151_________163\n_____________|___________|\n5'-CAC...UGGCG___________AGGUC...UCU-3'\n______________AAAGGGGAGUU\n______________||||:|||:||\n______________UUUCUCCUUAA\n3'-UUU...GGCAG___________AGUAA...ACA-5'\n_____________|___________|\n_____________53__________41\n |
156 -- 162 |
42 -- 48 |
-12.4472 kcal/mol |
1.70007 kcal/mol |
0.866923 kcal/mol |
151 163@LB@ | |@LB@5'-CAC...UGGCG AGGUC...UCU-3'@LB@ AAAGGGGAGUU@LB@ ||||:|||:||@LB@ UUUCUCCUUAA@LB@3'-UUU...GGCAG AGUAA...ACA-5'@LB@ | |@LB@ 53 41@LB@@LB@@LB@Energy -9.88 kcal/mol@LB@Hybridization Energy -12.4472 kcal/mol@LB@Unfolding Energy - mRNA 1.70007 kcal/mol@LB@Unfolding Energy - sRNA 0.866923 kcal/mol@LB@@LB@Position - mRNA 152 -- 162@LB@Position - sRNA 42 -- 52@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 42 -- 48@LB@ |
42 |
0.008125 |
0.6129 |
b2431 |
yfeX |
-9.88 |
0.043594 |
266 -- 278 |
44 -- 56 |
porphyrinogen oxidase cytoplasmic |
|
_____________265___________279\n_____________|_____________|\n5'-AUU...GCCAA___G_________GUUGA...CCA-3'\n______________CGU_AAAGGGGAA\n______________|||_||||:||||\n______________GCA_UUUCUCCUU\n3'-UUU...ACCGG___G_________AAAGU...ACA-5'\n_____________|_____________|\n_____________57____________43\n |
272 -- 278 |
44 -- 50 |
-15.4775 kcal/mol |
4.65199 kcal/mol |
0.948902 kcal/mol |
265 279@LB@ | |@LB@5'-AUU...GCCAA G GUUGA...CCA-3'@LB@ CGU AAAGGGGAA@LB@ ||| ||||:||||@LB@ GCA UUUCUCCUU@LB@3'-UUU...ACCGG G AAAGU...ACA-5'@LB@ | |@LB@ 57 43@LB@@LB@@LB@Energy -9.88 kcal/mol@LB@Hybridization Energy -15.4775 kcal/mol@LB@Unfolding Energy - mRNA 4.65199 kcal/mol@LB@Unfolding Energy - sRNA 0.948902 kcal/mol@LB@@LB@Position - mRNA 266 -- 278@LB@Position - sRNA 44 -- 56@LB@Position Seed - mRNA 272 -- 278@LB@Position Seed - sRNA 44 -- 50@LB@ |
189 |
0.03933 |
0.6177 |
b2461 |
eutP |
-9.78 |
0.045635 |
227 -- 240 |
44 -- 56 |
putative P-loop NTPase ethanolamine utilization protein |
|
_____________226____________241\n_____________|______________|\n5'-AAA...GGUAG________C_____AAACA...CCG-3'\n______________CGUCGGGG_AGGAA\n______________||||:::|_|||||\n______________GCAGUUUC_UCCUU\n3'-UUU...ACCGG______________AAAGU...ACA-5'\n_____________|______________|\n_____________57_____________43\n |
228 -- 234 |
49 -- 55 |
-15.0697 kcal/mol |
4.34178 kcal/mol |
0.948902 kcal/mol |
226 241@LB@ | |@LB@5'-AAA...GGUAG C AAACA...CCG-3'@LB@ CGUCGGGG AGGAA@LB@ ||||:::| |||||@LB@ GCAGUUUC UCCUU@LB@3'-UUU...ACCGG AAAGU...ACA-5'@LB@ | |@LB@ 57 43@LB@@LB@@LB@Energy -9.78 kcal/mol@LB@Hybridization Energy -15.0697 kcal/mol@LB@Unfolding Energy - mRNA 4.34178 kcal/mol@LB@Unfolding Energy - sRNA 0.948902 kcal/mol@LB@@LB@Position - mRNA 227 -- 240@LB@Position - sRNA 44 -- 56@LB@Position Seed - mRNA 228 -- 234@LB@Position Seed - sRNA 49 -- 55@LB@ |
44 |
0.008636 |
0.6129 |
b3317 |
rplB |
-9.78 |
0.045660 |
184 -- 194 |
43 -- 55 |
50S ribosomal subunit protein L2 |
|
_____________183___________195\n_____________|_____________|\n5'-GCA...AGUAA_____________AAUAC...UGC-3'\n______________GUC__GGAGGAGU\n______________|||__:|||||:|\n______________CAG__UCUCCUUA\n3'-UUU...CCGGG___UU________AAGUA...ACA-5'\n_____________|_____________|\n_____________56____________42\n |
188 -- 194 |
43 -- 49 |
-13.3143 kcal/mol |
2.58995 kcal/mol |
0.946481 kcal/mol |
183 195@LB@ | |@LB@5'-GCA...AGUAA AAUAC...UGC-3'@LB@ GUC GGAGGAGU@LB@ ||| :|||||:|@LB@ CAG UCUCCUUA@LB@3'-UUU...CCGGG UU AAGUA...ACA-5'@LB@ | |@LB@ 56 42@LB@@LB@@LB@Energy -9.78 kcal/mol@LB@Hybridization Energy -13.3143 kcal/mol@LB@Unfolding Energy - mRNA 2.58995 kcal/mol@LB@Unfolding Energy - sRNA 0.946481 kcal/mol@LB@@LB@Position - mRNA 184 -- 194@LB@Position - sRNA 43 -- 55@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 43 -- 49@LB@ |
118 |
0.0238 |
0.6177 |
b3321 |
rpsJ |
-9.75 |
0.046314 |
151 -- 177 |
30 -- 55 |
30S ribosomal subunit protein S10 |
|
_____________150___________________________178\n_____________|_____________________________|\n5'-UUC...AAUGG___U_________AA_______CG_____AAAAU...GUG-3'\n______________GUC___GAGGAGU__UCAUUUU__UUUAU\n______________|||___|||||:|__|||||||__|||||\n______________CAG___CUCCUUA__AGUAAAA__AAAUA\n3'-UUU...CCGGG___UUU_______A_______________AUAAU...ACA-5'\n_____________|_____________________________|\n_____________56____________________________29\n |
164 -- 170 |
35 -- 41 |
-16.2369 kcal/mol |
5.30163 kcal/mol |
1.18773 kcal/mol |
150 178@LB@ | |@LB@5'-UUC...AAUGG U AA CG AAAAU...GUG-3'@LB@ GUC GAGGAGU UCAUUUU UUUAU@LB@ ||| |||||:| ||||||| |||||@LB@ CAG CUCCUUA AGUAAAA AAAUA@LB@3'-UUU...CCGGG UUU A AUAAU...ACA-5'@LB@ | |@LB@ 56 29@LB@@LB@@LB@Energy -9.75 kcal/mol@LB@Hybridization Energy -16.2369 kcal/mol@LB@Unfolding Energy - mRNA 5.30163 kcal/mol@LB@Unfolding Energy - sRNA 1.18773 kcal/mol@LB@@LB@Position - mRNA 151 -- 177@LB@Position - sRNA 30 -- 55@LB@Position Seed - mRNA 164 -- 170@LB@Position Seed - sRNA 35 -- 41@LB@ |
32 |
0.006131 |
0.6129 |
b2585 |
pssA |
-9.74 |
0.046374 |
32 -- 41 |
45 -- 54 |
phosphatidylserine synthase; CDP-diacylglycerol-serine O-phosphatidyltransferase |
|
_____________31_________42\n_____________|__________|\n5'-CGC...CCAGC__________GAUCG...CCG-3'\n______________UCGAAGAGGG\n______________||:||||||:\n______________AGUUUCUCCU\n3'-UUU...CGGGC__________UAAAG...ACA-5'\n_____________|__________|\n_____________55_________44\n |
35 -- 41 |
45 -- 51 |
-13.2862 kcal/mol |
2.61225 kcal/mol |
0.929144 kcal/mol |
31 42@LB@ | |@LB@5'-CGC...CCAGC GAUCG...CCG-3'@LB@ UCGAAGAGGG@LB@ ||:||||||:@LB@ AGUUUCUCCU@LB@3'-UUU...CGGGC UAAAG...ACA-5'@LB@ | |@LB@ 55 44@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -13.2862 kcal/mol@LB@Unfolding Energy - mRNA 2.61225 kcal/mol@LB@Unfolding Energy - sRNA 0.929144 kcal/mol@LB@@LB@Position - mRNA 32 -- 41@LB@Position - sRNA 45 -- 54@LB@Position Seed - mRNA 35 -- 41@LB@Position Seed - sRNA 45 -- 51@LB@ |
65 |
0.01408 |
0.6177 |
b3176 |
glmM |
-9.74 |
0.046438 |
133 -- 141 |
48 -- 56 |
phosphoglucosamine mutase |
|
_____________132_______142\n_____________|_________|\n5'-GUU...CAUGA_________AACCG...CGG-3'\n______________CGUCAAAGA\n______________|||||||||\n______________GCAGUUUCU\n3'-UUU...ACCGG_________CCUUA...ACA-5'\n_____________|_________|\n_____________57________47\n |
135 -- 141 |
48 -- 54 |
-11.8395 kcal/mol |
1.20122 kcal/mol |
0.896433 kcal/mol |
132 142@LB@ | |@LB@5'-GUU...CAUGA AACCG...CGG-3'@LB@ CGUCAAAGA@LB@ |||||||||@LB@ GCAGUUUCU@LB@3'-UUU...ACCGG CCUUA...ACA-5'@LB@ | |@LB@ 57 47@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -11.8395 kcal/mol@LB@Unfolding Energy - mRNA 1.20122 kcal/mol@LB@Unfolding Energy - sRNA 0.896433 kcal/mol@LB@@LB@Position - mRNA 133 -- 141@LB@Position - sRNA 48 -- 56@LB@Position Seed - mRNA 135 -- 141@LB@Position Seed - sRNA 48 -- 54@LB@ |
75 |
0.01577 |
0.6177 |
b1345 |
intR |
-9.71 |
0.047033 |
139 -- 151 |
42 -- 53 |
Rac prophage; integrase |
|
_____________138___________152\n_____________|_____________|\n5'-UAA...GACAG____C________AUCUG...GGG-3'\n______________CAAA_GAGGGAUU\n______________||||_||||:|||\n______________GUUU_CUCCUUAA\n3'-UUU...GGGCA_____________AGUAA...ACA-5'\n_____________|_____________|\n_____________54____________41\n |
145 -- 151 |
42 -- 48 |
-12.4741 kcal/mol |
1.8255 kcal/mol |
0.933904 kcal/mol |
138 152@LB@ | |@LB@5'-UAA...GACAG C AUCUG...GGG-3'@LB@ CAAA GAGGGAUU@LB@ |||| ||||:|||@LB@ GUUU CUCCUUAA@LB@3'-UUU...GGGCA AGUAA...ACA-5'@LB@ | |@LB@ 54 41@LB@@LB@@LB@Energy -9.71 kcal/mol@LB@Hybridization Energy -12.4741 kcal/mol@LB@Unfolding Energy - mRNA 1.8255 kcal/mol@LB@Unfolding Energy - sRNA 0.933904 kcal/mol@LB@@LB@Position - mRNA 139 -- 151@LB@Position - sRNA 42 -- 53@LB@Position Seed - mRNA 145 -- 151@LB@Position Seed - sRNA 42 -- 48@LB@ |