189 |
0.009605 |
0.1776 |
b0927 |
ycbL |
-15.21 |
0.018444 |
14 -- 51 |
33 -- 78 |
putative metal-binding enzyme |
|
_____________13__________________________________________________52\n_____________|___________________________________________________|\n5'-GGA...GAAGA________U_____UAAAG__________________CGAU__________AUUGA...GCG-3'\n______________AAAG_CUA_CACAC________________GC_CAGG____GGAUUUCCAU\n______________||||_|||_|||||________________:|_||||____||||||||||\n______________UUUC_GAU_GUGUG________________UG_GUCC____CCUAAAGGUA\n3'-UUU...ACCCG____U_________UCGUUAAGCAACAAAG__A__________________CGAAU...GCA-5'\n_____________|___________________________________________________|\n_____________79__________________________________________________32\n |
45 -- 51 |
33 -- 39 |
-26.8189 kcal/mol |
6.79395 kcal/mol |
4.81602 kcal/mol |
13 52@LB@ | |@LB@5'-GGA...GAAGA U UAAAG CGAU AUUGA...GCG-3'@LB@ AAAG CUA CACAC GC CAGG GGAUUUCCAU@LB@ |||| ||| ||||| :| |||| ||||||||||@LB@ UUUC GAU GUGUG UG GUCC CCUAAAGGUA@LB@3'-UUU...ACCCG U UCGUUAAGCAACAAAG A CGAAU...GCA-5'@LB@ | |@LB@ 79 32@LB@@LB@@LB@Energy -15.21 kcal/mol@LB@Hybridization Energy -26.8189 kcal/mol@LB@Unfolding Energy - mRNA 6.79395 kcal/mol@LB@Unfolding Energy - sRNA 4.81602 kcal/mol@LB@@LB@Position - mRNA 14 -- 51@LB@Position - sRNA 33 -- 78@LB@Position Seed - mRNA 45 -- 51@LB@Position Seed - sRNA 33 -- 39@LB@ |
112 |
0.004986 |
0.1545 |
b0118 |
acnB |
-15.18 |
0.018766 |
221 -- 251 |
38 -- 71 |
aconitate hydratase 2; aconitase B; 2-methyl-cis-aconitate hydratase |
|
_____________220________________________________252\n_____________|__________________________________|\n5'-GAG...CGUAA_________UGAG___GC_______G________GCGCC...UGC-3'\n______________GCACGUAGC____CGU_____CGCU_AGGGGAUU\n______________:|||::|||____|||_____|:||_||||||||\n______________UGUGUGUCG____GCA_____GUGA_UCCCCUAA\n3'-UUU...UCUGA_________UUAA___ACAAA____G________AGGUA...GCA-5'\n_____________|__________________________________|\n_____________72_________________________________37\n |
245 -- 251 |
38 -- 44 |
-33.2374 kcal/mol |
13.3072 kcal/mol |
4.74986 kcal/mol |
220 252@LB@ | |@LB@5'-GAG...CGUAA UGAG GC G GCGCC...UGC-3'@LB@ GCACGUAGC CGU CGCU AGGGGAUU@LB@ :|||::||| ||| |:|| ||||||||@LB@ UGUGUGUCG GCA GUGA UCCCCUAA@LB@3'-UUU...UCUGA UUAA ACAAA G AGGUA...GCA-5'@LB@ | |@LB@ 72 37@LB@@LB@@LB@Energy -15.18 kcal/mol@LB@Hybridization Energy -33.2374 kcal/mol@LB@Unfolding Energy - mRNA 13.3072 kcal/mol@LB@Unfolding Energy - sRNA 4.74986 kcal/mol@LB@@LB@Position - mRNA 221 -- 251@LB@Position - sRNA 38 -- 71@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 38 -- 44@LB@ |
169 |
0.008352 |
0.1723 |
b1222 |
narX |
-15.18 |
0.018797 |
58 -- 74 |
61 -- 75 |
sensory histidine kinase in two-component regulatory system with NarL |
|
_____________57________________75\n_____________|_________________|\n5'-AAA...AAAGC_____AC__________AUAAG...CUG-3'\n______________GACUA__CACACGGCAA\n______________|||||__|||||:||||\n______________CUGAU__GUGUGUCGUU\n3'-UUU...CGUUU_________________AAGCA...GCA-5'\n_____________|_________________|\n_____________76________________60\n |
68 -- 74 |
61 -- 67 |
-20.5903 kcal/mol |
2.1582 kcal/mol |
3.25399 kcal/mol |
57 75@LB@ | |@LB@5'-AAA...AAAGC AC AUAAG...CUG-3'@LB@ GACUA CACACGGCAA@LB@ ||||| |||||:||||@LB@ CUGAU GUGUGUCGUU@LB@3'-UUU...CGUUU AAGCA...GCA-5'@LB@ | |@LB@ 76 60@LB@@LB@@LB@Energy -15.18 kcal/mol@LB@Hybridization Energy -20.5903 kcal/mol@LB@Unfolding Energy - mRNA 2.1582 kcal/mol@LB@Unfolding Energy - sRNA 3.25399 kcal/mol@LB@@LB@Position - mRNA 58 -- 74@LB@Position - sRNA 61 -- 75@LB@Position Seed - mRNA 68 -- 74@LB@Position Seed - sRNA 61 -- 67@LB@ |
92 |
0.004122 |
0.1538 |
b3912 |
cpxR |
-15.13 |
0.019325 |
106 -- 130 |
39 -- 76 |
response regulator in two-component regulatory system with CpxA |
|
_____________105_____________________________________131\n_____________|_______________________________________|\n5'-UGA...GAUUC________A___U__________________________GUAAA...AUG-3'\n______________AGGCUGCA_ACA_GCG______________UCAGGGGGU\n______________||:||:||_|||_||:______________|||||||:|\n______________UCUGAUGU_UGU_CGU______________AGUCCCCUA\n3'-UUU...CCGUU________G_______UAAGCAACAAAGUG_________AAGGU...GCA-5'\n_____________|_______________________________________|\n_____________77______________________________________38\n |
124 -- 130 |
39 -- 45 |
-28.779 kcal/mol |
8.86764 kcal/mol |
4.77949 kcal/mol |
105 131@LB@ | |@LB@5'-UGA...GAUUC A U GUAAA...AUG-3'@LB@ AGGCUGCA ACA GCG UCAGGGGGU@LB@ ||:||:|| ||| ||: |||||||:|@LB@ UCUGAUGU UGU CGU AGUCCCCUA@LB@3'-UUU...CCGUU G UAAGCAACAAAGUG AAGGU...GCA-5'@LB@ | |@LB@ 77 38@LB@@LB@@LB@Energy -15.13 kcal/mol@LB@Hybridization Energy -28.779 kcal/mol@LB@Unfolding Energy - mRNA 8.86764 kcal/mol@LB@Unfolding Energy - sRNA 4.77949 kcal/mol@LB@@LB@Position - mRNA 106 -- 130@LB@Position - sRNA 39 -- 76@LB@Position Seed - mRNA 124 -- 130@LB@Position Seed - sRNA 39 -- 45@LB@ |
44 |
0.001243 |
0.09943 |
b3064 |
tsaD |
-15.06 |
0.020167 |
98 -- 131 |
41 -- 82 |
tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein |
|
_____________97___________________________________________132\n_____________|____________________________________________|\n5'-CAU...UAUAA_________G_______GA________________U________CGAAC...UGA-3'\n______________GGGUGAGGA_UAUACAC__GGC_________UUUC_C_CAGGGG\n______________|||::|:||_||:||||__:||_________||||_|_||||||\n______________CCCGUUUCU_AUGUGUG__UCG_________AAAG_G_GUCCCC\n3'-UUU...CUCUA_________G____________UUAAGCAAC____U_A______UAAAG...GCA-5'\n_____________|____________________________________________|\n_____________83___________________________________________40\n |
108 -- 114 |
66 -- 72 |
-38.4936 kcal/mol |
9.4641 kcal/mol |
13.9685 kcal/mol |
97 132@LB@ | |@LB@5'-CAU...UAUAA G GA U CGAAC...UGA-3'@LB@ GGGUGAGGA UAUACAC GGC UUUC C CAGGGG@LB@ |||::|:|| ||:|||| :|| |||| | ||||||@LB@ CCCGUUUCU AUGUGUG UCG AAAG G GUCCCC@LB@3'-UUU...CUCUA G UUAAGCAAC U A UAAAG...GCA-5'@LB@ | |@LB@ 83 40@LB@@LB@@LB@Energy -15.06 kcal/mol@LB@Hybridization Energy -38.4936 kcal/mol@LB@Unfolding Energy - mRNA 9.4641 kcal/mol@LB@Unfolding Energy - sRNA 13.9685 kcal/mol@LB@@LB@Position - mRNA 98 -- 131@LB@Position - sRNA 41 -- 82@LB@Position Seed - mRNA 108 -- 114@LB@Position Seed - sRNA 66 -- 72@LB@ |
147 |
0.006785 |
0.1624 |
b1920 |
fliY |
-15.06 |
0.020217 |
159 -- 198 |
40 -- 75 |
cystine transporter subunit |
|
_____________158______________________________________199\n_____________|________________________________________|\n5'-CCA...ACAAU____C_____U____ACAGACAUAACAA_________U__AUAUG...UGC-3'\n______________GGCU_UACAC_GCAA_____________CAUUCGGGG_GA\n______________|:||_:||||_||||_____________||:||:|||_||\n______________CUGA_GUGUG_CGUU_____________GUGAGUCCC_CU\n3'-UUU...CGUUU____U_____U____AAGCAACAAA_______________AAAGG...GCA-5'\n_____________|________________________________________|\n_____________76_______________________________________39\n |
189 -- 195 |
42 -- 48 |
-27.6268 kcal/mol |
7.79206 kcal/mol |
4.77786 kcal/mol |
158 199@LB@ | |@LB@5'-CCA...ACAAU C U ACAGACAUAACAA U AUAUG...UGC-3'@LB@ GGCU UACAC GCAA CAUUCGGGG GA@LB@ |:|| :|||| |||| ||:||:||| ||@LB@ CUGA GUGUG CGUU GUGAGUCCC CU@LB@3'-UUU...CGUUU U U AAGCAACAAA AAAGG...GCA-5'@LB@ | |@LB@ 76 39@LB@@LB@@LB@Energy -15.06 kcal/mol@LB@Hybridization Energy -27.6268 kcal/mol@LB@Unfolding Energy - mRNA 7.79206 kcal/mol@LB@Unfolding Energy - sRNA 4.77786 kcal/mol@LB@@LB@Position - mRNA 159 -- 198@LB@Position - sRNA 40 -- 75@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 42 -- 48@LB@ |
97 |
0.004509 |
0.1538 |
b0465 |
mscK |
-15.00 |
0.020897 |
217 -- 248 |
49 -- 74 |
mechanosensitive channel protein intermediate conductance K+ regulated |
|
_____________216______________________________249\n_____________|________________________________|\n5'-CGA...CCAGU______AACGAU_______U______U_____GCAUU...CGC-3'\n______________AUUACA______CACGGCA_UUUGUU_UUUCA\n______________|:||||______|||:|||_||:|||_|||||\n______________UGAUGU______GUGUCGU_AAGCAA_AAAGU\n3'-UUU...GUUUC___________________U______C_____GAGUC...GCA-5'\n_____________|________________________________|\n_____________75_______________________________48\n |
229 -- 235 |
62 -- 68 |
-21.8954 kcal/mol |
3.22234 kcal/mol |
3.67122 kcal/mol |
216 249@LB@ | |@LB@5'-CGA...CCAGU AACGAU U U GCAUU...CGC-3'@LB@ AUUACA CACGGCA UUUGUU UUUCA@LB@ |:|||| |||:||| ||:||| |||||@LB@ UGAUGU GUGUCGU AAGCAA AAAGU@LB@3'-UUU...GUUUC U C GAGUC...GCA-5'@LB@ | |@LB@ 75 48@LB@@LB@@LB@Energy -15.00 kcal/mol@LB@Hybridization Energy -21.8954 kcal/mol@LB@Unfolding Energy - mRNA 3.22234 kcal/mol@LB@Unfolding Energy - sRNA 3.67122 kcal/mol@LB@@LB@Position - mRNA 217 -- 248@LB@Position - sRNA 49 -- 74@LB@Position Seed - mRNA 229 -- 235@LB@Position Seed - sRNA 62 -- 68@LB@ |
129 |
0.005822 |
0.1577 |
b0713 |
ybgL |
-14.99 |
0.021088 |
226 -- 247 |
61 -- 83 |
UPF0271 family protein |
|
_____________225_____________________248\n_____________|_______________________|\n5'-GCC...CGAUC_______________________CGCAG...AUG-3'\n______________UGGGCGAAGGCUGCGC_CAGCGA\n______________|||||:|||:||:|:|_||||:|\n______________ACCCGUUUCUGAUGUG_GUCGUU\n3'-UUU...CCUCU________________U______AAGCA...GCA-5'\n_____________|_______________________|\n_____________84______________________60\n |
234 -- 240 |
69 -- 75 |
-36.9571 kcal/mol |
11.7384 kcal/mol |
10.2322 kcal/mol |
225 248@LB@ | |@LB@5'-GCC...CGAUC CGCAG...AUG-3'@LB@ UGGGCGAAGGCUGCGC CAGCGA@LB@ |||||:|||:||:|:| ||||:|@LB@ ACCCGUUUCUGAUGUG GUCGUU@LB@3'-UUU...CCUCU U AAGCA...GCA-5'@LB@ | |@LB@ 84 60@LB@@LB@@LB@Energy -14.99 kcal/mol@LB@Hybridization Energy -36.9571 kcal/mol@LB@Unfolding Energy - mRNA 11.7384 kcal/mol@LB@Unfolding Energy - sRNA 10.2322 kcal/mol@LB@@LB@Position - mRNA 226 -- 247@LB@Position - sRNA 61 -- 83@LB@Position Seed - mRNA 234 -- 240@LB@Position Seed - sRNA 69 -- 75@LB@ |
54 |
0.00187 |
0.1218 |
b3607 |
cysE |
-14.87 |
0.022582 |
98 -- 129 |
42 -- 78 |
serine acetyltransferase |
|
_____________97_________________________________________130\n_____________|__________________________________________|\n5'-CGG...CACGC______GA__________C_____________AACCC_____AACCU...CGA-3'\n______________AAGGAC___GCGCAGCAG__________CACU_____CAGGG\n______________||:|||___:|:|||||:__________||||_____|||||\n______________UUUCUG___UGUGUCGUU__________GUGA_____GUCCC\n3'-UUU...ACCCG______AUG_________AAGCAACAAA______________CUAAA...GCA-5'\n_____________|__________________________________________|\n_____________79_________________________________________41\n |
108 -- 114 |
61 -- 67 |
-27.0645 kcal/mol |
7.42824 kcal/mol |
4.76487 kcal/mol |
97 130@LB@ | |@LB@5'-CGG...CACGC GA C AACCC AACCU...CGA-3'@LB@ AAGGAC GCGCAGCAG CACU CAGGG@LB@ ||:||| :|:|||||: |||| |||||@LB@ UUUCUG UGUGUCGUU GUGA GUCCC@LB@3'-UUU...ACCCG AUG AAGCAACAAA CUAAA...GCA-5'@LB@ | |@LB@ 79 41@LB@@LB@@LB@Energy -14.87 kcal/mol@LB@Hybridization Energy -27.0645 kcal/mol@LB@Unfolding Energy - mRNA 7.42824 kcal/mol@LB@Unfolding Energy - sRNA 4.76487 kcal/mol@LB@@LB@Position - mRNA 98 -- 129@LB@Position - sRNA 42 -- 78@LB@Position Seed - mRNA 108 -- 114@LB@Position Seed - sRNA 61 -- 67@LB@ |
22 |
0.0001899 |
0.02926 |
b2562 |
yfhL |
-14.77 |
0.023959 |
28 -- 42 |
42 -- 56 |
putative 4Fe-4S cluster-containing protein |
|
_____________27______________43\n_____________|_______________|\n5'-AGC...UCUGC____CA_________AAUGU...UUA-3'\n______________UUGU__CGCUCAGGG\n______________||||__|:|||||||\n______________AACA__GUGAGUCCC\n3'-UUU...UAAGC____AA_________CUAAA...GCA-5'\n_____________|_______________|\n_____________57______________41\n |
36 -- 42 |
42 -- 48 |
-19.6539 kcal/mol |
2.98712 kcal/mol |
1.89561 kcal/mol |
27 43@LB@ | |@LB@5'-AGC...UCUGC CA AAUGU...UUA-3'@LB@ UUGU CGCUCAGGG@LB@ |||| |:|||||||@LB@ AACA GUGAGUCCC@LB@3'-UUU...UAAGC AA CUAAA...GCA-5'@LB@ | |@LB@ 57 41@LB@@LB@@LB@Energy -14.77 kcal/mol@LB@Hybridization Energy -19.6539 kcal/mol@LB@Unfolding Energy - mRNA 2.98712 kcal/mol@LB@Unfolding Energy - sRNA 1.89561 kcal/mol@LB@@LB@Position - mRNA 28 -- 42@LB@Position - sRNA 42 -- 56@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 42 -- 48@LB@ |