| 79 |
0.01117 |
0.4523 |
b1593 |
ynfK |
-13.04 |
0.021217 |
188 -- 210 |
1 -- 21 |
putative dethiobiotin synthetase |
|
_____________187_____________________211\n_____________|_______________________|\n5'-CAC...AUAAC________________CUGA___GUUUC...CGG-3'\n______________GGUGGAGUUAGUGAUG____AGC\n______________::|::|||||:|||||____|||\n______________UUAUUUCAAUUACUAC____UCG\n3'-UUU...AUUAU________________UA_____-5'\n_____________|______________________|\n_____________22_____________________1\n |
197 -- 203 |
6 -- 12 |
-19.4081 kcal/mol |
6.29658 kcal/mol |
0.0669945 kcal/mol |
187 211@LB@ | |@LB@5'-CAC...AUAAC CUGA GUUUC...CGG-3'@LB@ GGUGGAGUUAGUGAUG AGC@LB@ ::|::|||||:||||| |||@LB@ UUAUUUCAAUUACUAC UCG@LB@3'-UUU...AUUAU UA -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -13.04 kcal/mol@LB@Hybridization Energy -19.4081 kcal/mol@LB@Unfolding Energy - mRNA 6.29658 kcal/mol@LB@Unfolding Energy - sRNA 0.0669945 kcal/mol@LB@@LB@Position - mRNA 188 -- 210@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 6 -- 12@LB@ |
| 117 |
0.01855 |
0.5155 |
b3011 |
yqhD |
-12.43 |
0.029448 |
82 -- 109 |
34 -- 64 |
aldehyde reductase NADPH-dependent |
|
_____________81________________________________110\n_____________|_________________________________|\n5'-GUU...CUGGA________CA____________GG_________GCAUU...UGA-3'\n______________GAAAUAGG_______AGACAUU__CAGAAAUGA\n______________||||||||_______|||||||__|||||||||\n______________CUUUAUCC_______UCUGUAA__GUCUUUACU\n3'-UUU...GCCAA________CCAUUUG__________________UACUG...UCG-5'\n_____________|_________________________________|\n_____________65________________________________33\n |
83 -- 89 |
57 -- 63 |
-24.9555 kcal/mol |
6.2587 kcal/mol |
6.27071 kcal/mol |
81 110@LB@ | |@LB@5'-GUU...CUGGA CA GG GCAUU...UGA-3'@LB@ GAAAUAGG AGACAUU CAGAAAUGA@LB@ |||||||| ||||||| |||||||||@LB@ CUUUAUCC UCUGUAA GUCUUUACU@LB@3'-UUU...GCCAA CCAUUUG UACUG...UCG-5'@LB@ | |@LB@ 65 33@LB@@LB@@LB@Energy -12.43 kcal/mol@LB@Hybridization Energy -24.9555 kcal/mol@LB@Unfolding Energy - mRNA 6.2587 kcal/mol@LB@Unfolding Energy - sRNA 6.27071 kcal/mol@LB@@LB@Position - mRNA 82 -- 109@LB@Position - sRNA 34 -- 64@LB@Position Seed - mRNA 83 -- 89@LB@Position Seed - sRNA 57 -- 63@LB@ |
| 114 |
0.01806 |
0.5155 |
b3033 |
yqiB |
-9.53 |
0.119911 |
174 -- 206 |
15 -- 50 |
DUF1249 protein YqiB |
|
_____________173__________________________________207\n_____________|____________________________________|\n5'-UGG...AUCAU__A_____AAA_____________C___________CGUUA...GCG-3'\n______________CA_GCGUU___AAAUGAGUG__GG__AUAAAUGAAG\n______________||_:|:||___||||||:||__||__||||||:|||\n______________GU_UGUAA___UUUACUUAC__CC__UAUUUAUUUC\n3'-UUU...CAUUU__C_____GUC_________UG__AU__________AAUUA...UCG-5'\n_____________|____________________________________|\n_____________51___________________________________14\n |
200 -- 206 |
15 -- 21 |
-20.8588 kcal/mol |
5.00376 kcal/mol |
6.32253 kcal/mol |
173 207@LB@ | |@LB@5'-UGG...AUCAU A AAA C CGUUA...GCG-3'@LB@ CA GCGUU AAAUGAGUG GG AUAAAUGAAG@LB@ || :|:|| ||||||:|| || ||||||:|||@LB@ GU UGUAA UUUACUUAC CC UAUUUAUUUC@LB@3'-UUU...CAUUU C GUC UG AU AAUUA...UCG-5'@LB@ | |@LB@ 51 14@LB@@LB@@LB@Energy -9.53 kcal/mol@LB@Hybridization Energy -20.8588 kcal/mol@LB@Unfolding Energy - mRNA 5.00376 kcal/mol@LB@Unfolding Energy - sRNA 6.32253 kcal/mol@LB@@LB@Position - mRNA 174 -- 206@LB@Position - sRNA 15 -- 50@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 15 -- 21@LB@ |
| 84 |
0.01184 |
0.4627 |
b3101 |
yqjF |
-11.66 |
0.043663 |
211 -- 235 |
1 -- 23 |
putative quinol oxidase subunit |
|
_____________210_______________________236\n_____________|_________________________|\n5'-CAG...AAAAU____A__U_______UAC_______GCGCA...GUA-3'\n______________UAGA_GA_GUUGGUG___UGGUAGC\n______________||:|_:|_|||::||___||:||||\n______________AUUU_UU_CAAUUAC___ACUAUCG\n3'-UUU...CCAUU____A__U_______U_________-5'\n_____________|________________________|\n_____________24_______________________1\n |
229 -- 235 |
1 -- 7 |
-15.9826 kcal/mol |
4.21954 kcal/mol |
0.105066 kcal/mol |
210 236@LB@ | |@LB@5'-CAG...AAAAU A U UAC GCGCA...GUA-3'@LB@ UAGA GA GUUGGUG UGGUAGC@LB@ ||:| :| |||::|| ||:||||@LB@ AUUU UU CAAUUAC ACUAUCG@LB@3'-UUU...CCAUU A U U -5'@LB@ | |@LB@ 24 1@LB@@LB@@LB@Energy -11.66 kcal/mol@LB@Hybridization Energy -15.9826 kcal/mol@LB@Unfolding Energy - mRNA 4.21954 kcal/mol@LB@Unfolding Energy - sRNA 0.105066 kcal/mol@LB@@LB@Position - mRNA 211 -- 235@LB@Position - sRNA 1 -- 23@LB@Position Seed - mRNA 229 -- 235@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 96 |
0.01578 |
0.5059 |
b3283 |
yrdD |
-12.59 |
0.027007 |
10 -- 20 |
2 -- 12 |
ssDNA-binding protein function unknown |
|
_____________9___________21\n_____________|___________|\n5'-AAC...CGUGA___________AGCGA...UUG-3'\n______________AAUGGUGAUAG\n______________||||:||||||\n______________UUACUACUAUC\n3'-UUU...UUCAA___________G-5'\n_____________|___________|\n_____________13__________1\n |
14 -- 20 |
2 -- 8 |
-13.6612 kcal/mol |
1.03146 kcal/mol |
0.0386655 kcal/mol |
9 21@LB@ | |@LB@5'-AAC...CGUGA AGCGA...UUG-3'@LB@ AAUGGUGAUAG@LB@ ||||:||||||@LB@ UUACUACUAUC@LB@3'-UUU...UUCAA G-5'@LB@ | |@LB@ 13 1@LB@@LB@@LB@Energy -12.59 kcal/mol@LB@Hybridization Energy -13.6612 kcal/mol@LB@Unfolding Energy - mRNA 1.03146 kcal/mol@LB@Unfolding Energy - sRNA 0.0386655 kcal/mol@LB@@LB@Position - mRNA 10 -- 20@LB@Position - sRNA 2 -- 12@LB@Position Seed - mRNA 14 -- 20@LB@Position Seed - sRNA 2 -- 8@LB@ |
| 5 |
3.022e-05 |
0.01984 |
b4553 |
ysaB |
-16.91 |
0.002179 |
166 -- 209 |
3 -- 54 |
uncharacterized protein |
|
_____________165__________________________________________________210\n_____________|____________________________________________________|\n5'-UCA...AUAAA___UA____UCACCUGCAAACCA_____________________________AACGC...AUC-3'\n______________UAA__AGAC______________GACGGUAAU________UUAAUGAUGAUG\n______________|||__||||______________|||||||||________|||||||||||:\n______________AUU__UCUG______________CUGCCAUUA________AAUUACUACUAU\n3'-UUU...UCCCC___UG____UAAGUCUUUACUUA_________UUUAUUUC____________CG-5'\n_____________|____________________________________________________|\n_____________55___________________________________________________2\n |
203 -- 209 |
3 -- 9 |
-28.2861 kcal/mol |
5.03949 kcal/mol |
6.3375 kcal/mol |
165 210@LB@ | |@LB@5'-UCA...AUAAA UA UCACCUGCAAACCA AACGC...AUC-3'@LB@ UAA AGAC GACGGUAAU UUAAUGAUGAUG@LB@ ||| |||| ||||||||| |||||||||||:@LB@ AUU UCUG CUGCCAUUA AAUUACUACUAU@LB@3'-UUU...UCCCC UG UAAGUCUUUACUUA UUUAUUUC CG-5'@LB@ | |@LB@ 55 2@LB@@LB@@LB@Energy -16.91 kcal/mol@LB@Hybridization Energy -28.2861 kcal/mol@LB@Unfolding Energy - mRNA 5.03949 kcal/mol@LB@Unfolding Energy - sRNA 6.3375 kcal/mol@LB@@LB@Position - mRNA 166 -- 209@LB@Position - sRNA 3 -- 54@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 3 -- 9@LB@ |
| 180 |
0.02979 |
0.5424 |
b4217 |
ytfK |
-6.46 |
0.400721 |
35 -- 83 |
12 -- 56 |
DUF1107 family protein |
|
_____________34_____________________________________________________84\n_____________|______________________________________________________|\n5'-GAA...GCUUC______A____A______________A__U___ACCUUUAG_____A_______UACGC...AAU-3'\n______________GGUAAA_AGAU_AUUC_____UGAAU_AU_GUA________GUAAA_AAAGUUA\n______________||||||_|||:_||||_____|||||_|:_|||________:||||_|||||||\n______________CCAUUU_UCUG_UAAG_____ACUUA_UG_CAU________UAUUU_UUUCAAU\n3'-UUU...UAUCC______G_________UCUUU_____C__C________________A_______UACUA...UCG-5'\n_____________|______________________________________________________|\n_____________57_____________________________________________________11\n |
77 -- 83 |
12 -- 18 |
-20.0112 kcal/mol |
7.22293 kcal/mol |
6.33232 kcal/mol |
34 84@LB@ | |@LB@5'-GAA...GCUUC A A A U ACCUUUAG A UACGC...AAU-3'@LB@ GGUAAA AGAU AUUC UGAAU AU GUA GUAAA AAAGUUA@LB@ |||||| |||: |||| ||||| |: ||| :|||| |||||||@LB@ CCAUUU UCUG UAAG ACUUA UG CAU UAUUU UUUCAAU@LB@3'-UUU...UAUCC G UCUUU C C A UACUA...UCG-5'@LB@ | |@LB@ 57 11@LB@@LB@@LB@Energy -6.46 kcal/mol@LB@Hybridization Energy -20.0112 kcal/mol@LB@Unfolding Energy - mRNA 7.22293 kcal/mol@LB@Unfolding Energy - sRNA 6.33232 kcal/mol@LB@@LB@Position - mRNA 35 -- 83@LB@Position - sRNA 12 -- 56@LB@Position Seed - mRNA 77 -- 83@LB@Position Seed - sRNA 12 -- 18@LB@ |
| 54 |
0.006418 |
0.3902 |
b0946 |
zapC |
-14.33 |
0.010402 |
184 -- 201 |
47 -- 63 |
FtsZ stabilizer |
|
_____________183________________202\n_____________|__________________|\n5'-AUU...UUAUA_________AG_______UGCGA...GUU-3'\n______________GGGUAGGGG__AGGCAGA\n______________:::||||||__|::||||\n______________UUUAUCCCC__UUUGUCU\n3'-UUU...CCAAC_________A________GUAAG...UCG-5'\n_____________|__________________|\n_____________64_________________46\n |
195 -- 201 |
47 -- 53 |
-19.5846 kcal/mol |
3.17109 kcal/mol |
2.08245 kcal/mol |
183 202@LB@ | |@LB@5'-AUU...UUAUA AG UGCGA...GUU-3'@LB@ GGGUAGGGG AGGCAGA@LB@ :::|||||| |::||||@LB@ UUUAUCCCC UUUGUCU@LB@3'-UUU...CCAAC A GUAAG...UCG-5'@LB@ | |@LB@ 64 46@LB@@LB@@LB@Energy -14.33 kcal/mol@LB@Hybridization Energy -19.5846 kcal/mol@LB@Unfolding Energy - mRNA 3.17109 kcal/mol@LB@Unfolding Energy - sRNA 2.08245 kcal/mol@LB@@LB@Position - mRNA 184 -- 201@LB@Position - sRNA 47 -- 63@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 47 -- 53@LB@ |
| 143 |
0.02405 |
0.526 |
b3292 |
zntR |
-11.17 |
0.055543 |
275 -- 285 |
1 -- 12 |
zntA gene transcriptional activator |
|
_____________274__________286\n_____________|____________|\n5'-UGA...CAGCA____________AUGAA...CUG-3'\n______________GAUGAUGG_AGC\n______________:||||||:_|||\n______________UUACUACU_UCG\n3'-UUU...UUCAA________A___-5'\n_____________|___________|\n_____________13__________1\n |
276 -- 282 |
5 -- 11 |
-12.3439 kcal/mol |
1.13072 kcal/mol |
0.0394463 kcal/mol |
274 286@LB@ | |@LB@5'-UGA...CAGCA AUGAA...CUG-3'@LB@ GAUGAUGG AGC@LB@ :||||||: |||@LB@ UUACUACU UCG@LB@3'-UUU...UUCAA A -5'@LB@ | |@LB@ 13 1@LB@@LB@@LB@Energy -11.17 kcal/mol@LB@Hybridization Energy -12.3439 kcal/mol@LB@Unfolding Energy - mRNA 1.13072 kcal/mol@LB@Unfolding Energy - sRNA 0.0394463 kcal/mol@LB@@LB@Position - mRNA 275 -- 285@LB@Position - sRNA 1 -- 12@LB@Position Seed - mRNA 276 -- 282@LB@Position Seed - sRNA 5 -- 11@LB@ |
| 120 |
0.01923 |
0.5155 |
b4004 |
zraR |
-8.11 |
0.219313 |
234 -- 248 |
1 -- 12 |
fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein |
b2220 |
_____________233_____________249\n_____________|_______________|\n5'-GGA...UGGUG________CAU____CACUG...CGC-3'\n______________GAUGAUGA___UAGC\n______________:|||||||___||||\n______________UUACUACU___AUCG\n3'-UUU...UUCAA_______________-5'\n_____________|______________|\n_____________13_____________1\n |
235 -- 241 |
5 -- 11 |
-11.3572 kcal/mol |
3.21186 kcal/mol |
0.0394463 kcal/mol |
233 249@LB@ | |@LB@5'-GGA...UGGUG CAU CACUG...CGC-3'@LB@ GAUGAUGA UAGC@LB@ :||||||| ||||@LB@ UUACUACU AUCG@LB@3'-UUU...UUCAA -5'@LB@ | |@LB@ 13 1@LB@@LB@@LB@Energy -8.11 kcal/mol@LB@Hybridization Energy -11.3572 kcal/mol@LB@Unfolding Energy - mRNA 3.21186 kcal/mol@LB@Unfolding Energy - sRNA 0.0394463 kcal/mol@LB@@LB@Position - mRNA 234 -- 248@LB@Position - sRNA 1 -- 12@LB@Position Seed - mRNA 235 -- 241@LB@Position Seed - sRNA 5 -- 11@LB@ |
