167 |
0.04638 |
0.7403 |
lmo1401 |
N/A |
-16.51 |
0.050998 |
149 -- 209 |
155 -- 204 |
|
|
_____________148________210\n_____________|__________|\n5'-AUU...AACAA__________CUAUU...UCA-3'\n______________AAUGAAAAUA\n______________||||||||:|\n______________UUACUUUUGU\n3'-GUU...UCUAC__________UUAUU...GGA-5'\n_____________|__________|\n_____________205________154\n |
203 -- 209 |
155 -- 161 |
-7.61408 kcal/mol |
0.775188 kcal/mol |
0.60613 kcal/mol |
148 210@LB@ | |@LB@5'-AUU...AACAA CUAUU...UCA-3'@LB@ AAUGAAAAUA@LB@ ||||||||:|@LB@ UUACUUUUGU@LB@3'-GUU...UCUAC UUAUU...GGA-5'@LB@ | |@LB@ 205 154@LB@@LB@@LB@Energy -16.51 kcal/mol@LB@Hybridization Energy -7.61408 kcal/mol@LB@Unfolding Energy - mRNA 0.775188 kcal/mol@LB@Unfolding Energy - sRNA 0.60613 kcal/mol@LB@@LB@Position - mRNA 149 -- 209@LB@Position - sRNA 155 -- 204@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 155 -- 161@LB@ |
176 |
0.04979 |
0.7607 |
lmo1340 |
N/A |
-16.63 |
0.048446 |
193 -- 216 |
151 -- 177 |
|
|
_____________192_____________217\n_____________|_______________|\n5'-UGC...UUGGA_______________AAAAU...CUG-3'\n______________GGCCA__GAGAUGAA\n______________|||||__||||||||\n______________CCGGU__CUCUACUU\n3'-GUU...AUGUG_____UA________ACUUU...GGA-5'\n_____________|_______________|\n_____________178_____________150\n |
199 -- 205 |
163 -- 169 |
-19.0992 kcal/mol |
1.80937 kcal/mol |
7.44208 kcal/mol |
192 217@LB@ | |@LB@5'-UGC...UUGGA AAAAU...CUG-3'@LB@ GGCCA GAGAUGAA@LB@ ||||| ||||||||@LB@ CCGGU CUCUACUU@LB@3'-GUU...AUGUG UA ACUUU...GGA-5'@LB@ | |@LB@ 178 150@LB@@LB@@LB@Energy -16.63 kcal/mol@LB@Hybridization Energy -19.0992 kcal/mol@LB@Unfolding Energy - mRNA 1.80937 kcal/mol@LB@Unfolding Energy - sRNA 7.44208 kcal/mol@LB@@LB@Position - mRNA 193 -- 216@LB@Position - sRNA 151 -- 177@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 163 -- 169@LB@ |
178 |
0.05066 |
0.7607 |
lmo0216 |
N/A |
-18.27 |
0.022949 |
55 -- 114 |
166 -- 213 |
|
|
_____________54__________________________________________________________________________________115\n_____________|___________________________________________________________________________________|\n5'-GCG...UCCAA__AAU______A______A__A___G__________UUUCCUUGUUUUU___CUA______A______U___U____A_____UUUGU...CGG-3'\n______________GC_____UGUU___GUGC_CU_GUG_GUGGCGGGAU_____________GCA___AGAUAU_AAUUAC_CGG_CCAA__AGAU\n______________||_____||||___|:||_||_:||_:|::||||||_____________|||___|||:||_||:|||_|||_||||__||||\n______________CG_____ACAA___CGCG_GA_UAC_UAUUGCCCUA_____________CGU___UCUGUA_UUGAUG_GCC_GGUU__UCUA\n3'-GUU...CGCAA__GUAGU____GCC___________G__________CUC_____________A________C______U________AC____CUUAC...GGA-5'\n_____________|___________________________________________________________________________________|\n_____________214_________________________________________________________________________________165\n |
62 -- 68 |
200 -- 206 |
-50.1796 kcal/mol |
16.7648 kcal/mol |
22.1647 kcal/mol |
54 115@LB@ | |@LB@5'-GCG...UCCAA AAU A A A G UUUCCUUGUUUUU CUA A U U A UUUGU...CGG-3'@LB@ GC UGUU GUGC CU GUG GUGGCGGGAU GCA AGAUAU AAUUAC CGG CCAA AGAU@LB@ || |||| |:|| || :|| :|::|||||| ||| |||:|| ||:||| ||| |||| ||||@LB@ CG ACAA CGCG GA UAC UAUUGCCCUA CGU UCUGUA UUGAUG GCC GGUU UCUA@LB@3'-GUU...CGCAA GUAGU GCC G CUC A C U AC CUUAC...GGA-5'@LB@ | |@LB@ 214 165@LB@@LB@@LB@Energy -18.27 kcal/mol@LB@Hybridization Energy -50.1796 kcal/mol@LB@Unfolding Energy - mRNA 16.7648 kcal/mol@LB@Unfolding Energy - sRNA 22.1647 kcal/mol@LB@@LB@Position - mRNA 55 -- 114@LB@Position - sRNA 166 -- 213@LB@Position Seed - mRNA 62 -- 68@LB@Position Seed - sRNA 200 -- 206@LB@ |
182 |
0.05242 |
0.7607 |
lmo2028 |
N/A |
-14.74 |
0.108099 |
169 -- 210 |
158 -- 185 |
|
|
_____________168_________211\n_____________|___________|\n5'-CUU...AUUAU___________UUUAU...AAC-3'\n______________GAUGGAUGGAA\n______________||||:|||:||\n______________CUACUUACUUU\n3'-GUU...UUACU___________UGUUU...GGA-5'\n_____________|___________|\n_____________186_________157\n |
204 -- 210 |
158 -- 164 |
-12.4441 kcal/mol |
2.18802 kcal/mol |
0.806249 kcal/mol |
168 211@LB@ | |@LB@5'-CUU...AUUAU UUUAU...AAC-3'@LB@ GAUGGAUGGAA@LB@ ||||:|||:||@LB@ CUACUUACUUU@LB@3'-GUU...UUACU UGUUU...GGA-5'@LB@ | |@LB@ 186 157@LB@@LB@@LB@Energy -14.74 kcal/mol@LB@Hybridization Energy -12.4441 kcal/mol@LB@Unfolding Energy - mRNA 2.18802 kcal/mol@LB@Unfolding Energy - sRNA 0.806249 kcal/mol@LB@@LB@Position - mRNA 169 -- 210@LB@Position - sRNA 158 -- 185@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 158 -- 164@LB@ |
184 |
0.05355 |
0.7607 |
lmo2119 |
N/A |
-15.99 |
0.064071 |
3 -- 81 |
95 -- 171 |
|
|
_____________2_________________________82\n_____________|_________________________|\n_________5'-CU______U______GU__________AUUAC...CCA-3'\n______________UGGGAU_AGUGAA__GACAGAUAGU\n______________||:|||_|:||||__:|||:|||:|\n______________ACUCUA_UUACUU__UUGUUUAUUA\n3'-GUU...CGGUU______C__________________CUAAA...GGA-5'\n_____________|_________________________|\n_____________172_______________________94\n |
18 -- 24 |
152 -- 158 |
-18.6088 kcal/mol |
3.83703 kcal/mol |
5.55637 kcal/mol |
2 82@LB@ | |@LB@ 5'-CU U GU AUUAC...CCA-3'@LB@ UGGGAU AGUGAA GACAGAUAGU@LB@ ||:||| |:|||| :|||:|||:|@LB@ ACUCUA UUACUU UUGUUUAUUA@LB@3'-GUU...CGGUU C CUAAA...GGA-5'@LB@ | |@LB@ 172 94@LB@@LB@@LB@Energy -15.99 kcal/mol@LB@Hybridization Energy -18.6088 kcal/mol@LB@Unfolding Energy - mRNA 3.83703 kcal/mol@LB@Unfolding Energy - sRNA 5.55637 kcal/mol@LB@@LB@Position - mRNA 3 -- 81@LB@Position - sRNA 95 -- 171@LB@Position Seed - mRNA 18 -- 24@LB@Position Seed - sRNA 152 -- 158@LB@ |
191 |
0.0551 |
0.7607 |
lmo2853 |
N/A |
-14.70 |
0.110014 |
201 -- 241 |
156 -- 201 |
|
|
_____________200_______________________________________________242\n_____________|_________________________________________________|\n5'-GGU...AGAAA________________________AA___U___ACGU____________UAUCC...UUC-3'\n______________GUGAG____AGAUAU_AACUGCGC__GGC_CAA_____UGAA__GAAGC\n______________:||||____|||:||_||||:|:|__|||_|||_____||||__:||:|\n______________UACUC____UCUGUA_UUGAUGUG__CCG_GUU_____ACUU__UUUUG\n3'-GUU...UGCCC_____CGUA______C_________________ACUCU____AC_____UUUAU...GGA-5'\n_____________|_________________________________________________|\n_____________202_______________________________________________155\n |
213 -- 219 |
178 -- 184 |
-28.7711 kcal/mol |
7.06239 kcal/mol |
14.0114 kcal/mol |
200 242@LB@ | |@LB@5'-GGU...AGAAA AA U ACGU UAUCC...UUC-3'@LB@ GUGAG AGAUAU AACUGCGC GGC CAA UGAA GAAGC@LB@ :|||| |||:|| ||||:|:| ||| ||| |||| :||:|@LB@ UACUC UCUGUA UUGAUGUG CCG GUU ACUU UUUUG@LB@3'-GUU...UGCCC CGUA C ACUCU AC UUUAU...GGA-5'@LB@ | |@LB@ 202 155@LB@@LB@@LB@Energy -14.70 kcal/mol@LB@Hybridization Energy -28.7711 kcal/mol@LB@Unfolding Energy - mRNA 7.06239 kcal/mol@LB@Unfolding Energy - sRNA 14.0114 kcal/mol@LB@@LB@Position - mRNA 201 -- 241@LB@Position - sRNA 156 -- 201@LB@Position Seed - mRNA 213 -- 219@LB@Position Seed - sRNA 178 -- 184@LB@ |
194 |
0.05602 |
0.7607 |
lmo1602 |
N/A |
-15.08 |
0.094256 |
153 -- 204 |
160 -- 207 |
|
|
_____________152_______________________________________205\n_____________|_________________________________________|\n5'-UUU...ACUCA_________AAAA___________A_____U____A_____UAGUA...CAA-3'\n______________GGGUAUAGA____GGA__AUAUGG__GGUG_GGAU_GAUGA\n______________:||:|||||____|:|__|:|:||__::||_:|||_:||||\n______________UCCGUAUCU____CUU__UGUGCC__UUAC_UCUA_UUACU\n3'-GUU...CCUAC_________GUA____GA______GG_________C_____UUUGU...GGA-5'\n_____________|_________________________________________|\n_____________208_______________________________________159\n |
168 -- 174 |
191 -- 197 |
-27.2651 kcal/mol |
6.9826 kcal/mol |
13.8637 kcal/mol |
152 205@LB@ | |@LB@5'-UUU...ACUCA AAAA A U A UAGUA...CAA-3'@LB@ GGGUAUAGA GGA AUAUGG GGUG GGAU GAUGA@LB@ :||:||||| |:| |:|:|| ::|| :||| :||||@LB@ UCCGUAUCU CUU UGUGCC UUAC UCUA UUACU@LB@3'-GUU...CCUAC GUA GA GG C UUUGU...GGA-5'@LB@ | |@LB@ 208 159@LB@@LB@@LB@Energy -15.08 kcal/mol@LB@Hybridization Energy -27.2651 kcal/mol@LB@Unfolding Energy - mRNA 6.9826 kcal/mol@LB@Unfolding Energy - sRNA 13.8637 kcal/mol@LB@@LB@Position - mRNA 153 -- 204@LB@Position - sRNA 160 -- 207@LB@Position Seed - mRNA 168 -- 174@LB@Position Seed - sRNA 191 -- 197@LB@ |
198 |
0.05669 |
0.7607 |
lmo2670 |
N/A |
-16.54 |
0.050282 |
118 -- 190 |
141 -- 216 |
|
|
_____________117_________________191\n_____________|___________________|\n5'-AAU...AUUUG_________UACC______UUCAA...UCU-3'\n______________GAUGAGAUG____GGGAAC\n______________:||||||||____|::|||\n______________UUACUCUAC____CUUUUG\n3'-GUU...GCCGG_________UUA_______UUUAU...GGA-5'\n_____________|___________________|\n_____________217_________________140\n |
72 -- 78 |
165 -- 171 |
-16.0384 kcal/mol |
2.83906 kcal/mol |
0.941471 kcal/mol |
117 191@LB@ | |@LB@5'-AAU...AUUUG UACC UUCAA...UCU-3'@LB@ GAUGAGAUG GGGAAC@LB@ :|||||||| |::|||@LB@ UUACUCUAC CUUUUG@LB@3'-GUU...GCCGG UUA UUUAU...GGA-5'@LB@ | |@LB@ 217 140@LB@@LB@@LB@Energy -16.54 kcal/mol@LB@Hybridization Energy -16.0384 kcal/mol@LB@Unfolding Energy - mRNA 2.83906 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 118 -- 190@LB@Position - sRNA 141 -- 216@LB@Position Seed - mRNA 72 -- 78@LB@Position Seed - sRNA 165 -- 171@LB@ |
199 |
0.05673 |
0.7607 |
lmo0888 |
N/A |
-13.34 |
0.187096 |
200 -- 237 |
174 -- 211 |
|
|
_____________199___________________238\n_____________|_____________________|\n5'-AAG...GGCGG_____A__UAU__________ACGCA...AUA-3'\n______________AGUGA_GU___AAUGGAAGCA\n______________|:|||_:|___||||:||:||\n______________UUACU_UA___UUACUUUUGU\n3'-GUU...GCCGG_____C__C____________UUAUU...GGA-5'\n_____________|_____________________|\n_____________212___________________173\n |
32 -- 38 |
155 -- 161 |
-11.9538 kcal/mol |
2.24583 kcal/mol |
0.954976 kcal/mol |
199 238@LB@ | |@LB@5'-AAG...GGCGG A UAU ACGCA...AUA-3'@LB@ AGUGA GU AAUGGAAGCA@LB@ |:||| :| ||||:||:||@LB@ UUACU UA UUACUUUUGU@LB@3'-GUU...GCCGG C C UUAUU...GGA-5'@LB@ | |@LB@ 212 173@LB@@LB@@LB@Energy -13.34 kcal/mol@LB@Hybridization Energy -11.9538 kcal/mol@LB@Unfolding Energy - mRNA 2.24583 kcal/mol@LB@Unfolding Energy - sRNA 0.954976 kcal/mol@LB@@LB@Position - mRNA 200 -- 237@LB@Position - sRNA 174 -- 211@LB@Position Seed - mRNA 32 -- 38@LB@Position Seed - sRNA 155 -- 161@LB@ |
200 |
0.05675 |
0.7607 |
lmo0115 |
lmaD |
-15.21 |
0.089253 |
167 -- 203 |
151 -- 184 |
|
|
_____________166_________________204\n_____________|___________________|\n5'-AUG...GUGGG____________A______UUUUA...UGG-3'\n______________AAUG_GAUGGAU_GAAAAC\n______________||||_||||:||_||||||\n______________UUAC_CUACUUA_CUUUUG\n3'-GUU...GCCGG____U______________UUUAU...GGA-5'\n_____________|___________________|\n_____________185_________________150\n |
200 -- 206 |
162 -- 168 |
-16.3044 kcal/mol |
1.75857 kcal/mol |
0.941471 kcal/mol |
166 204@LB@ | |@LB@5'-AUG...GUGGG A UUUUA...UGG-3'@LB@ AAUG GAUGGAU GAAAAC@LB@ |||| ||||:|| ||||||@LB@ UUAC CUACUUA CUUUUG@LB@3'-GUU...GCCGG U UUUAU...GGA-5'@LB@ | |@LB@ 185 150@LB@@LB@@LB@Energy -15.21 kcal/mol@LB@Hybridization Energy -16.3044 kcal/mol@LB@Unfolding Energy - mRNA 1.75857 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 167 -- 203@LB@Position - sRNA 151 -- 184@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 162 -- 168@LB@ |