| 148 |
0.03863 |
0.6968 |
lmo1766 |
purN |
-15.06 |
0.094934 |
1 -- 35 |
156 -- 188 |
phosphoribosylglycinamide formyltransferase |
|
______________1__________________________________36\n______________|__________________________________|\n___________5'-_____GAA___________UAAAC_A_________GUAUG...AUA-3'\n______________GUGAA___AUACGGCCAAU_____G_AAUGGAAAU\n______________:||||___|:|||||||||_____|_||||:|||:\n______________UACUU___UGUGCCGGUUA_____C_UUACUUUUG\n3'-GUU...AUCUG_____GA____________CUCUA___________UUUAU...GGA-5'\n_____________|___________________________________|\n_____________189_________________________________155\n |
29 -- 35 |
156 -- 162 |
-25.7257 kcal/mol |
7.32217 kcal/mol |
9.72027 kcal/mol |
1 36@LB@ | |@LB@ 5'- GAA UAAAC A GUAUG...AUA-3'@LB@ GUGAA AUACGGCCAAU G AAUGGAAAU@LB@ :|||| |:||||||||| | ||||:|||:@LB@ UACUU UGUGCCGGUUA C UUACUUUUG@LB@3'-GUU...AUCUG GA CUCUA UUUAU...GGA-5'@LB@ | |@LB@ 189 155@LB@@LB@@LB@Energy -15.06 kcal/mol@LB@Hybridization Energy -25.7257 kcal/mol@LB@Unfolding Energy - mRNA 7.32217 kcal/mol@LB@Unfolding Energy - sRNA 9.72027 kcal/mol@LB@@LB@Position - mRNA 1 -- 35@LB@Position - sRNA 156 -- 188@LB@Position Seed - mRNA 29 -- 35@LB@Position Seed - sRNA 156 -- 162@LB@ |
| 135 |
0.03605 |
0.6968 |
lmo1003 |
N/A |
-16.96 |
0.041836 |
78 -- 154 |
154 -- 221 |
phosphotransferase system enzyme I |
|
_____________77_______________________________________________________________________________________155\n_____________|________________________________________________________________________________________|\n5'-GUG...CUUAA____AUCA_____________CUCUUG___U___UAA______CU_____UACUAU______U_AA___A_C______AAA_______UUGAA...AAG-3'\n______________AUCA____UGGGCG_UUAUGU______GUA_UGG____AGGCG__GACAU______CUACAC_G__GGU_G_GAUGAA___GAAGCAA\n______________||||____:|||||_:||||:______:||_:||____||||:__|||||______||||||_|__::|_|_||||||___:||:|||\n______________UAGU____GCCCGC_GAUACG______UAU_GCC____UCCGU__CUGUA______GAUGUG_C__UUA_C_CUACUU___UUUUGUU\n3'-GUU...AACGG____ACAA______G_______________U___CUAC_____AU_____CUU_________C_GG_____U______AC________UAUUA...GGA-5'\n_____________|________________________________________________________________________________________|\n_____________222______________________________________________________________________________________153\n |
148 -- 154 |
154 -- 160 |
-50.8348 kcal/mol |
18.1196 kcal/mol |
22.592 kcal/mol |
77 155@LB@ | |@LB@5'-GUG...CUUAA AUCA CUCUUG U UAA CU UACUAU U AA A C AAA UUGAA...AAG-3'@LB@ AUCA UGGGCG UUAUGU GUA UGG AGGCG GACAU CUACAC G GGU G GAUGAA GAAGCAA@LB@ |||| :||||| :||||: :|| :|| ||||: ||||| |||||| | ::| | |||||| :||:|||@LB@ UAGU GCCCGC GAUACG UAU GCC UCCGU CUGUA GAUGUG C UUA C CUACUU UUUUGUU@LB@3'-GUU...AACGG ACAA G U CUAC AU CUU C GG U AC UAUUA...GGA-5'@LB@ | |@LB@ 222 153@LB@@LB@@LB@Energy -16.96 kcal/mol@LB@Hybridization Energy -50.8348 kcal/mol@LB@Unfolding Energy - mRNA 18.1196 kcal/mol@LB@Unfolding Energy - sRNA 22.592 kcal/mol@LB@@LB@Position - mRNA 78 -- 154@LB@Position - sRNA 154 -- 221@LB@Position Seed - mRNA 148 -- 154@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 134 |
0.0358 |
0.6968 |
lmo2682 |
kdpA |
-15.50 |
0.078936 |
69 -- 121 |
151 -- 202 |
potassium-transporting ATPase subunit A |
|
_____________68_____________________________________________122\n_____________|______________________________________________|\n5'-ACA...UUGGU___AU___UG_____AAGAG______G___________CG______GGGUG...AAA-3'\n______________AGG__UAG__GUGGA_____UACGGU_AA_GGGGUGAA__GAAAAU\n______________|||__|||__:||:|_____:||||:_||_|:|:||||__|||||:\n______________UCC__AUC__UACUU_____GUGCCG_UU_CUCUACUU__CUUUUG\n3'-GUU...CCUAC___GU___UG_____GAU________G__A________A_______UUUAU...GGA-5'\n_____________|______________________________________________|\n_____________203____________________________________________150\n |
102 -- 108 |
163 -- 169 |
-34.0107 kcal/mol |
9.08348 kcal/mol |
13.9626 kcal/mol |
68 122@LB@ | |@LB@5'-ACA...UUGGU AU UG AAGAG G CG GGGUG...AAA-3'@LB@ AGG UAG GUGGA UACGGU AA GGGGUGAA GAAAAU@LB@ ||| ||| :||:| :||||: || |:|:|||| |||||:@LB@ UCC AUC UACUU GUGCCG UU CUCUACUU CUUUUG@LB@3'-GUU...CCUAC GU UG GAU G A A UUUAU...GGA-5'@LB@ | |@LB@ 203 150@LB@@LB@@LB@Energy -15.50 kcal/mol@LB@Hybridization Energy -34.0107 kcal/mol@LB@Unfolding Energy - mRNA 9.08348 kcal/mol@LB@Unfolding Energy - sRNA 13.9626 kcal/mol@LB@@LB@Position - mRNA 69 -- 121@LB@Position - sRNA 151 -- 202@LB@Position Seed - mRNA 102 -- 108@LB@Position Seed - sRNA 163 -- 169@LB@ |
| 21 |
0.003699 |
0.4469 |
lmo2681 |
kdpB |
-18.50 |
0.020601 |
185 -- 204 |
154 -- 173 |
potassium-transporting ATPase subunit B |
|
_____________184__________________205\n_____________|____________________|\n5'-GCA...UUUCA____________________UGGAA...AUG-3'\n______________AAUGAGGUGAAUGGAAAUGA\n______________||||||:||||||:|||::|\n______________UUACUCUACUUACUUUUGUU\n3'-GUU...GCCGG____________________UAUUA...GGA-5'\n_____________|____________________|\n_____________174__________________153\n |
197 -- 203 |
155 -- 161 |
-22.9313 kcal/mol |
3.41 kcal/mol |
0.959215 kcal/mol |
184 205@LB@ | |@LB@5'-GCA...UUUCA UGGAA...AUG-3'@LB@ AAUGAGGUGAAUGGAAAUGA@LB@ ||||||:||||||:|||::|@LB@ UUACUCUACUUACUUUUGUU@LB@3'-GUU...GCCGG UAUUA...GGA-5'@LB@ | |@LB@ 174 153@LB@@LB@@LB@Energy -18.50 kcal/mol@LB@Hybridization Energy -22.9313 kcal/mol@LB@Unfolding Energy - mRNA 3.41 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 185 -- 204@LB@Position - sRNA 154 -- 173@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 155 -- 161@LB@ |
| 133 |
0.03548 |
0.6968 |
lmo2772 |
N/A |
-15.87 |
0.067267 |
191 -- 210 |
179 -- 199 |
PTS beta-glucoside transporter subunit IIABC |
|
_____________190__________________211\n_____________|____________________|\n5'-GCG...UUUAG____AU______________AAUCA...AAU-3'\n______________GAGG__UAG_CAUGGACUAC\n______________||||__|||_||||:|||||\n______________CUCC__AUC_GUACUUGAUG\n3'-GUU...CCCUA____GU___U__________UGCCG...GGA-5'\n_____________|____________________|\n_____________200__________________178\n |
203 -- 209 |
180 -- 186 |
-24.3176 kcal/mol |
4.09739 kcal/mol |
10.4768 kcal/mol |
190 211@LB@ | |@LB@5'-GCG...UUUAG AU AAUCA...AAU-3'@LB@ GAGG UAG CAUGGACUAC@LB@ |||| ||| ||||:|||||@LB@ CUCC AUC GUACUUGAUG@LB@3'-GUU...CCCUA GU U UGCCG...GGA-5'@LB@ | |@LB@ 200 178@LB@@LB@@LB@Energy -15.87 kcal/mol@LB@Hybridization Energy -24.3176 kcal/mol@LB@Unfolding Energy - mRNA 4.09739 kcal/mol@LB@Unfolding Energy - sRNA 10.4768 kcal/mol@LB@@LB@Position - mRNA 191 -- 210@LB@Position - sRNA 179 -- 199@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 180 -- 186@LB@ |
| 87 |
0.02294 |
0.6733 |
lmo2765 |
N/A |
-17.07 |
0.039744 |
188 -- 213 |
176 -- 199 |
PTS cellbiose transporter subunit IIA |
|
_____________187_________________214\n_____________|___________________|\n5'-UUA...UAGAC________A__________GUUAU...AUU-3'\n______________AUGA_AUG_AAUGGAAACA\n______________||||_|||_||||:|||||\n______________UACU_UAC_UUACUUUUGU\n3'-GUU...CCGGU____C______________UUAUU...GGA-5'\n_____________|___________________|\n_____________200_________________175\n |
212 -- 218 |
155 -- 161 |
-13.3886 kcal/mol |
2.47541 kcal/mol |
0.935542 kcal/mol |
187 214@LB@ | |@LB@5'-UUA...UAGAC A GUUAU...AUU-3'@LB@ AUGA AUG AAUGGAAACA@LB@ |||| ||| ||||:|||||@LB@ UACU UAC UUACUUUUGU@LB@3'-GUU...CCGGU C UUAUU...GGA-5'@LB@ | |@LB@ 200 175@LB@@LB@@LB@Energy -17.07 kcal/mol@LB@Hybridization Energy -13.3886 kcal/mol@LB@Unfolding Energy - mRNA 2.47541 kcal/mol@LB@Unfolding Energy - sRNA 0.935542 kcal/mol@LB@@LB@Position - mRNA 188 -- 213@LB@Position - sRNA 176 -- 199@LB@Position Seed - mRNA 212 -- 218@LB@Position Seed - sRNA 155 -- 161@LB@ |
| 44 |
0.01013 |
0.599 |
lmo0022 |
N/A |
-16.20 |
0.058356 |
176 -- 261 |
150 -- 213 |
PTS fructose transporter subunit IIB |
|
_____________175________________262\n_____________|__________________|\n5'-CCG...GUGAU_______A___A______UGAUG...UCA-3'\n______________GAUGGGG_GGA_GAGGAC\n______________:|||:|:_|:|_||::||\n______________UUACUCU_CUU_CUUUUG\n3'-GUU...GCCGG_______A___A______UUUAU...GGA-5'\n_____________|__________________|\n_____________214________________149\n |
181 -- 187 |
167 -- 173 |
-14.383 kcal/mol |
2.57794 kcal/mol |
0.941471 kcal/mol |
175 262@LB@ | |@LB@5'-CCG...GUGAU A A UGAUG...UCA-3'@LB@ GAUGGGG GGA GAGGAC@LB@ :|||:|: |:| ||::||@LB@ UUACUCU CUU CUUUUG@LB@3'-GUU...GCCGG A A UUUAU...GGA-5'@LB@ | |@LB@ 214 149@LB@@LB@@LB@Energy -16.20 kcal/mol@LB@Hybridization Energy -14.383 kcal/mol@LB@Unfolding Energy - mRNA 2.57794 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 176 -- 261@LB@Position - sRNA 150 -- 213@LB@Position Seed - mRNA 181 -- 187@LB@Position Seed - sRNA 167 -- 173@LB@ |
| 137 |
0.03627 |
0.6968 |
lmo2666 |
N/A |
-15.01 |
0.096662 |
42 -- 111 |
153 -- 211 |
PTS galacticol transporter subunit IIB |
|
_____________41__________________112\n_____________|___________________|\n5'-CUC...ACUCA___CGAAA___________AGUAA...UGG-3'\n______________GAG_____GAUGAAGACGA\n______________|||_____:|||||:||:|\n______________CUC_____UUACUUUUGUU\n3'-GUU...GGUUA___UAC_____________UAUUA...GGA-5'\n_____________|___________________|\n_____________212_________________152\n |
104 -- 110 |
154 -- 160 |
-11.8615 kcal/mol |
1.60013 kcal/mol |
0.933796 kcal/mol |
41 112@LB@ | |@LB@5'-CUC...ACUCA CGAAA AGUAA...UGG-3'@LB@ GAG GAUGAAGACGA@LB@ ||| :|||||:||:|@LB@ CUC UUACUUUUGUU@LB@3'-GUU...GGUUA UAC UAUUA...GGA-5'@LB@ | |@LB@ 212 152@LB@@LB@@LB@Energy -15.01 kcal/mol@LB@Hybridization Energy -11.8615 kcal/mol@LB@Unfolding Energy - mRNA 1.60013 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 42 -- 111@LB@Position - sRNA 153 -- 211@LB@Position Seed - mRNA 104 -- 110@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 127 |
0.03392 |
0.6968 |
lmo2096 |
N/A |
-16.75 |
0.045974 |
122 -- 137 |
183 -- 198 |
PTS galacticol transporter subunit IIC |
|
_____________121___________________138\n_____________|_____________________|\n5'-UAG...UUUCU____A__C_____________GAAGA...UGA-3'\n______________UAAC_GG_AUG_GGCAUGGAC\n______________||||_||_|||_|||||:|||\n______________AUUG_CC_UAC_CCGUAUCUG\n3'-GUU...UACGU____C______U_________UACUU...GGA-5'\n_____________|_____________________|\n_____________199___________________182\n |
129 -- 135 |
191 -- 197 |
-23.3255 kcal/mol |
4.68556 kcal/mol |
9.82628 kcal/mol |
121 138@LB@ | |@LB@5'-UAG...UUUCU A C GAAGA...UGA-3'@LB@ UAAC GG AUG GGCAUGGAC@LB@ |||| || ||| |||||:|||@LB@ AUUG CC UAC CCGUAUCUG@LB@3'-GUU...UACGU C U UACUU...GGA-5'@LB@ | |@LB@ 199 182@LB@@LB@@LB@Energy -16.75 kcal/mol@LB@Hybridization Energy -23.3255 kcal/mol@LB@Unfolding Energy - mRNA 4.68556 kcal/mol@LB@Unfolding Energy - sRNA 9.82628 kcal/mol@LB@@LB@Position - mRNA 122 -- 137@LB@Position - sRNA 183 -- 198@LB@Position Seed - mRNA 129 -- 135@LB@Position Seed - sRNA 191 -- 197@LB@ |
| 128 |
0.03459 |
0.6968 |
lmo1993 |
pdp |
-15.44 |
0.080912 |
179 -- 212 |
139 -- 174 |
pyrimidine-nucleoside phosphorylase |
|
_____________178_________________213\n_____________|___________________|\n5'-AUU...GAAAG____A___GA_________GGUGG...UUC-3'\n______________GGUG_AGA__AAUGAGAAU\n______________::||_|||__|||||:||:\n______________UUAC_UCU__UUACUUUUG\n3'-GUU...GCCGG________AC_________UUUAU...GGA-5'\n_____________|___________________|\n_____________175_________________138\n |
202 -- 208 |
156 -- 162 |
-13.005 kcal/mol |
2.24337 kcal/mol |
0.941471 kcal/mol |
178 213@LB@ | |@LB@5'-AUU...GAAAG A GA GGUGG...UUC-3'@LB@ GGUG AGA AAUGAGAAU@LB@ ::|| ||| |||||:||:@LB@ UUAC UCU UUACUUUUG@LB@3'-GUU...GCCGG AC UUUAU...GGA-5'@LB@ | |@LB@ 175 138@LB@@LB@@LB@Energy -15.44 kcal/mol@LB@Hybridization Energy -13.005 kcal/mol@LB@Unfolding Energy - mRNA 2.24337 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 179 -- 212@LB@Position - sRNA 139 -- 174@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 156 -- 162@LB@ |
