10 |
0.002311 |
0.4469 |
lmo2106 |
N/A |
-20.89 |
0.006356 |
172 -- 222 |
159 -- 207 |
|
|
_____________171__________________________________________________223\n_____________|____________________________________________________|\n5'-AGU...UAAUA_______AC__CAA______G_____AAA____U__UUAA_______G____UUAUA...AUG-3'\n______________AAUGGGA__AG___CAUAGA_GUGAA____AUG_CU____AGAUGAA_UGGA\n______________||:||||__||___||||||_:||||____|:|_|:____|||||||_||:|\n______________UUGCCCU__UC___GUAUCU_UACUU____UGC_GG____UCUACUU_ACUU\n3'-GUU...ACGUA_______AC__C________G_____GAUG___C__UUAC____________UUGUU...GGA-5'\n_____________|____________________________________________________|\n_____________208__________________________________________________158\n |
211 -- 217 |
163 -- 169 |
-34.9864 kcal/mol |
6.68059 kcal/mol |
18.5724 kcal/mol |
171 223@LB@ | |@LB@5'-AGU...UAAUA AC CAA G AAA U UUAA G UUAUA...AUG-3'@LB@ AAUGGGA AG CAUAGA GUGAA AUG CU AGAUGAA UGGA@LB@ ||:|||| || |||||| :|||| |:| |: ||||||| ||:|@LB@ UUGCCCU UC GUAUCU UACUU UGC GG UCUACUU ACUU@LB@3'-GUU...ACGUA AC C G GAUG C UUAC UUGUU...GGA-5'@LB@ | |@LB@ 208 158@LB@@LB@@LB@Energy -20.89 kcal/mol@LB@Hybridization Energy -34.9864 kcal/mol@LB@Unfolding Energy - mRNA 6.68059 kcal/mol@LB@Unfolding Energy - sRNA 18.5724 kcal/mol@LB@@LB@Position - mRNA 172 -- 222@LB@Position - sRNA 159 -- 207@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 163 -- 169@LB@ |
19 |
0.003536 |
0.4469 |
lmo0321 |
N/A |
-22.74 |
0.002408 |
114 -- 157 |
167 -- 207 |
|
|
_____________113____________________________________________158\n_____________|______________________________________________|\n5'-AUU...UGUUA________UA____G_AC__________GGA_____U_________AUGUU...AGG-3'\n______________AGCGGGAU__GAGG_A__UAGGUA_GAA____ACGG_CUAAUGAGA\n______________|:||||||__||||_|__|||::|_|||____||||_|:|||||||\n______________UUGCCCUA__CUCC_U__AUCUGU_CUU____UGCC_GGUUACUCU\n3'-GUU...ACGUA______________G_________A___GAUG______________ACUUA...GGA-5'\n_____________|______________________________________________|\n_____________208____________________________________________166\n |
151 -- 157 |
167 -- 173 |
-39.7249 kcal/mol |
9.73371 kcal/mol |
18.0488 kcal/mol |
113 158@LB@ | |@LB@5'-AUU...UGUUA UA G AC GGA U AUGUU...AGG-3'@LB@ AGCGGGAU GAGG A UAGGUA GAA ACGG CUAAUGAGA@LB@ |:|||||| |||| | |||::| ||| |||| |:|||||||@LB@ UUGCCCUA CUCC U AUCUGU CUU UGCC GGUUACUCU@LB@3'-GUU...ACGUA G A GAUG ACUUA...GGA-5'@LB@ | |@LB@ 208 166@LB@@LB@@LB@Energy -22.74 kcal/mol@LB@Hybridization Energy -39.7249 kcal/mol@LB@Unfolding Energy - mRNA 9.73371 kcal/mol@LB@Unfolding Energy - sRNA 18.0488 kcal/mol@LB@@LB@Position - mRNA 114 -- 157@LB@Position - sRNA 167 -- 207@LB@Position Seed - mRNA 151 -- 157@LB@Position Seed - sRNA 167 -- 173@LB@ |
25 |
0.004689 |
0.5029 |
lmo1584 |
N/A |
-20.33 |
0.008463 |
183 -- 211 |
169 -- 209 |
|
|
_____________182___________212\n_____________|_____________|\n5'-GAA...GGCGC_____________AAAUG...CUG-3'\n______________ACAUGGCUAAUGA\n______________|||:|||:|||||\n______________UGUGCCGGUUACU\n3'-GUU...CUUGA_____________CUACU...GGA-5'\n_____________|_____________|\n_____________210___________168\n |
205 -- 211 |
169 -- 175 |
-19.4521 kcal/mol |
2.17631 kcal/mol |
6.15322 kcal/mol |
182 212@LB@ | |@LB@5'-GAA...GGCGC AAAUG...CUG-3'@LB@ ACAUGGCUAAUGA@LB@ |||:|||:|||||@LB@ UGUGCCGGUUACU@LB@3'-GUU...CUUGA CUACU...GGA-5'@LB@ | |@LB@ 210 168@LB@@LB@@LB@Energy -20.33 kcal/mol@LB@Hybridization Energy -19.4521 kcal/mol@LB@Unfolding Energy - mRNA 2.17631 kcal/mol@LB@Unfolding Energy - sRNA 6.15322 kcal/mol@LB@@LB@Position - mRNA 183 -- 211@LB@Position - sRNA 169 -- 209@LB@Position Seed - mRNA 205 -- 211@LB@Position Seed - sRNA 169 -- 175@LB@ |
31 |
0.00657 |
0.5515 |
lmo1828 |
N/A |
-18.66 |
0.019040 |
211 -- 279 |
154 -- 211 |
|
|
_____________210__________280\n_____________|____________|\n5'-AGU...GAAAA____________UUGGG...AAU-3'\n______________GCAUGACGGGAU\n______________||||:|||||||\n______________CGUAUUGCCCUA\n3'-GUU...GGAUA____________CUCCG...GGA-5'\n_____________|____________|\n_____________212__________153\n |
216 -- 222 |
200 -- 206 |
-19.8213 kcal/mol |
2.93239 kcal/mol |
6.43166 kcal/mol |
210 280@LB@ | |@LB@5'-AGU...GAAAA UUGGG...AAU-3'@LB@ GCAUGACGGGAU@LB@ ||||:|||||||@LB@ CGUAUUGCCCUA@LB@3'-GUU...GGAUA CUCCG...GGA-5'@LB@ | |@LB@ 212 153@LB@@LB@@LB@Energy -18.66 kcal/mol@LB@Hybridization Energy -19.8213 kcal/mol@LB@Unfolding Energy - mRNA 2.93239 kcal/mol@LB@Unfolding Energy - sRNA 6.43166 kcal/mol@LB@@LB@Position - mRNA 211 -- 279@LB@Position - sRNA 154 -- 211@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 200 -- 206@LB@ |
33 |
0.006763 |
0.5515 |
lmo1941 |
N/A |
-21.42 |
0.004845 |
223 -- 286 |
154 -- 207 |
|
|
_____________222___________________________________________________________________287\n_____________|_____________________________________________________________________|\n5'-UAG...AGAAA_______AUACGAAGAACC___UGAUUAU________UU___AA_________________UC______UGAAC...UGU-3'\n______________AACGGGA____________GGC_______GACAUGAG__CUG___GGCCA___AGAUGAAU___AACAA\n______________|||||||____________|||_______|||||||:__||:___|||||___||||||||___|||||\n______________UUGCCCU____________CCG_______CUGUACUU__GAU___CCGGU___UCUACUUA___UUGUU\n3'-GUU...ACGUA_______ACU____________UAU_________________GUG_____UAC________CUU_____UAUUA...GGA-5'\n_____________|_____________________________________________________________________|\n_____________208___________________________________________________________________153\n |
273 -- 279 |
162 -- 168 |
-39.5283 kcal/mol |
10.6608 kcal/mol |
18.6655 kcal/mol |
222 287@LB@ | |@LB@5'-UAG...AGAAA AUACGAAGAACC UGAUUAU UU AA UC UGAAC...UGU-3'@LB@ AACGGGA GGC GACAUGAG CUG GGCCA AGAUGAAU AACAA@LB@ ||||||| ||| |||||||: ||: ||||| |||||||| |||||@LB@ UUGCCCU CCG CUGUACUU GAU CCGGU UCUACUUA UUGUU@LB@3'-GUU...ACGUA ACU UAU GUG UAC CUU UAUUA...GGA-5'@LB@ | |@LB@ 208 153@LB@@LB@@LB@Energy -21.42 kcal/mol@LB@Hybridization Energy -39.5283 kcal/mol@LB@Unfolding Energy - mRNA 10.6608 kcal/mol@LB@Unfolding Energy - sRNA 18.6655 kcal/mol@LB@@LB@Position - mRNA 223 -- 286@LB@Position - sRNA 154 -- 207@LB@Position Seed - mRNA 273 -- 279@LB@Position Seed - sRNA 162 -- 168@LB@ |
35 |
0.00718 |
0.552 |
lmo0397 |
N/A |
-24.49 |
0.000911 |
178 -- 232 |
160 -- 211 |
|
|
_____________177_________________________________________________________________________233\n_____________|___________________________________________________________________________|\n5'-AAU...ACAAA_______AAAAUGAAAGCAAAU_____________G__UU_G______GAG___AU__AA___C___________UAUGA...CGA-3'\n______________CUGUGCG_______________UGGCGGGA___GG_AU__A_AUGAAC___GCA__CG__CGA_GAGAUGA_UGA\n______________||:|||:_______________|::|||||___||_||__|_||||||___:||__||__|:|_|||||||_|||\n______________GAUACGU_______________AUUGCCCU___CC_UA__U_UACUUG___UGU__GC__GUU_CUCUACU_ACU\n3'-GUU...CCGCG______________________________ACU__G__UC_G______A_________CG___A_______U___UUUGU...GGA-5'\n_____________|___________________________________________________________________________|\n_____________212_________________________________________________________________________159\n |
223 -- 229 |
164 -- 170 |
-45.3132 kcal/mol |
12.0365 kcal/mol |
19.7814 kcal/mol |
177 233@LB@ | |@LB@5'-AAU...ACAAA AAAAUGAAAGCAAAU G UU G GAG AU AA C UAUGA...CGA-3'@LB@ CUGUGCG UGGCGGGA GG AU A AUGAAC GCA CG CGA GAGAUGA UGA@LB@ ||:|||: |::||||| || || | |||||| :|| || |:| ||||||| |||@LB@ GAUACGU AUUGCCCU CC UA U UACUUG UGU GC GUU CUCUACU ACU@LB@3'-GUU...CCGCG ACU G UC G A CG A U UUUGU...GGA-5'@LB@ | |@LB@ 212 159@LB@@LB@@LB@Energy -24.49 kcal/mol@LB@Hybridization Energy -45.3132 kcal/mol@LB@Unfolding Energy - mRNA 12.0365 kcal/mol@LB@Unfolding Energy - sRNA 19.7814 kcal/mol@LB@@LB@Position - mRNA 178 -- 232@LB@Position - sRNA 160 -- 211@LB@Position Seed - mRNA 223 -- 229@LB@Position Seed - sRNA 164 -- 170@LB@ |
38 |
0.007855 |
0.5562 |
lmo1229 |
N/A |
-18.27 |
0.022927 |
193 -- 228 |
147 -- 186 |
|
|
_____________192_______________________________________229\n_____________|_________________________________________|\n5'-AUU...AGGAG___U_________A________________UA_________CAACA...GCG-3'\n______________GAA_UUACGUGGC_AAUGAGA_____GAAA__AAGUAGUGA\n______________|||_:|||::|||_|||||||_____||||__||:||:|||\n______________CUU_GAUGUGCCG_UUACUCU_____CUUU__UUUAUUACU\n3'-GUU...CUGUA_____________G_______ACUUA____UG_________AAAAC...GGA-5'\n_____________|_________________________________________|\n_____________187_______________________________________146\n |
207 -- 213 |
167 -- 173 |
-29.0601 kcal/mol |
3.84241 kcal/mol |
14.4129 kcal/mol |
192 229@LB@ | |@LB@5'-AUU...AGGAG U A UA CAACA...GCG-3'@LB@ GAA UUACGUGGC AAUGAGA GAAA AAGUAGUGA@LB@ ||| :|||::||| ||||||| |||| ||:||:|||@LB@ CUU GAUGUGCCG UUACUCU CUUU UUUAUUACU@LB@3'-GUU...CUGUA G ACUUA UG AAAAC...GGA-5'@LB@ | |@LB@ 187 146@LB@@LB@@LB@Energy -18.27 kcal/mol@LB@Hybridization Energy -29.0601 kcal/mol@LB@Unfolding Energy - mRNA 3.84241 kcal/mol@LB@Unfolding Energy - sRNA 14.4129 kcal/mol@LB@@LB@Position - mRNA 193 -- 228@LB@Position - sRNA 147 -- 186@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 167 -- 173@LB@ |
40 |
0.00848 |
0.5705 |
lmo2399 |
N/A |
-21.52 |
0.004592 |
127 -- 195 |
156 -- 207 |
|
|
_____________126_________________________________________________________________196\n_____________|___________________________________________________________________|\n5'-AUU...UCGAC_________GU_______CUUGUGGUUUAAAC____AGA____G__UAGA______A___G______GCUAA...CUG-3'\n______________GGUGAGGCA__GGCG_GA______________GCUA___ACGG_UA____AUGGGG_GAA_GAGGAU\n______________|:|||||||__|:|:_||______________:|||___||||_:|____|||:|:_|||_||::|:\n______________CUACUCCGU__CUGU_CU______________UGAU___UGCC_GU____UACUCU_CUU_CUUUUG\n3'-GUU...UUGCC_________AU____A____________________G______G____________A___A______UUUAU...GGA-5'\n_____________|___________________________________________________________________|\n_____________208_________________________________________________________________155\n |
132 -- 138 |
194 -- 200 |
-37.8581 kcal/mol |
11.6457 kcal/mol |
14.014 kcal/mol |
126 196@LB@ | |@LB@5'-AUU...UCGAC GU CUUGUGGUUUAAAC AGA G UAGA A G GCUAA...CUG-3'@LB@ GGUGAGGCA GGCG GA GCUA ACGG UA AUGGGG GAA GAGGAU@LB@ |:||||||| |:|: || :||| |||| :| |||:|: ||| ||::|:@LB@ CUACUCCGU CUGU CU UGAU UGCC GU UACUCU CUU CUUUUG@LB@3'-GUU...UUGCC AU A G G A A UUUAU...GGA-5'@LB@ | |@LB@ 208 155@LB@@LB@@LB@Energy -21.52 kcal/mol@LB@Hybridization Energy -37.8581 kcal/mol@LB@Unfolding Energy - mRNA 11.6457 kcal/mol@LB@Unfolding Energy - sRNA 14.014 kcal/mol@LB@@LB@Position - mRNA 127 -- 195@LB@Position - sRNA 156 -- 207@LB@Position Seed - mRNA 132 -- 138@LB@Position Seed - sRNA 194 -- 200@LB@ |
50 |
0.01167 |
0.599 |
lmo0850 |
N/A |
-18.65 |
0.019190 |
166 -- 190 |
141 -- 165 |
|
|
_____________165________________________191\n_____________|__________________________|\n5'-UGG...AAAGA____AAAAUAAAAA____________AUUUU...AAU-3'\n______________GAGA__________GAAUGAAAACAA\n______________||||__________||||||||||||\n______________CUCU__________CUUACUUUUGUU\n3'-GUU...GGUUA____A_____________________UAUUA...GGA-5'\n_____________|__________________________|\n_____________166________________________140\n |
171 -- 177 |
154 -- 160 |
-14.3235 kcal/mol |
1.0644 kcal/mol |
0.933796 kcal/mol |
165 191@LB@ | |@LB@5'-UGG...AAAGA AAAAUAAAAA AUUUU...AAU-3'@LB@ GAGA GAAUGAAAACAA@LB@ |||| ||||||||||||@LB@ CUCU CUUACUUUUGUU@LB@3'-GUU...GGUUA A UAUUA...GGA-5'@LB@ | |@LB@ 166 140@LB@@LB@@LB@Energy -18.65 kcal/mol@LB@Hybridization Energy -14.3235 kcal/mol@LB@Unfolding Energy - mRNA 1.0644 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 166 -- 190@LB@Position - sRNA 141 -- 165@LB@Position Seed - mRNA 171 -- 177@LB@Position Seed - sRNA 154 -- 160@LB@ |
53 |
0.0118 |
0.599 |
lmo2394 |
N/A |
-15.56 |
0.076801 |
20 -- 80 |
100 -- 170 |
|
|
_____________19_____________________________________81\n_____________|______________________________________|\n5'-GGA...UUUUC________GUG___GG____________A_________AUAGU...AAA-3'\n______________GAUAGAUG___GAU________AUUUUG_UGGAGGAUG\n______________:|:|||||___||:________|||:|:_||||:||||\n______________UUGUCUAC___CUG________UAAGAU_ACCUUCUAC\n3'-GUU...CAGAU________AGA___AUCAACGG______A_________CUAUG...GGA-5'\n_____________|______________________________________|\n_____________171____________________________________99\n |
189 -- 195 |
97 -- 103 |
-26.5698 kcal/mol |
4.81204 kcal/mol |
9.44565 kcal/mol |
19 81@LB@ | |@LB@5'-GGA...UUUUC GUG GG A AUAGU...AAA-3'@LB@ GAUAGAUG GAU AUUUUG UGGAGGAUG@LB@ :|:||||| ||: |||:|: ||||:||||@LB@ UUGUCUAC CUG UAAGAU ACCUUCUAC@LB@3'-GUU...CAGAU AGA AUCAACGG A CUAUG...GGA-5'@LB@ | |@LB@ 171 99@LB@@LB@@LB@Energy -15.56 kcal/mol@LB@Hybridization Energy -26.5698 kcal/mol@LB@Unfolding Energy - mRNA 4.81204 kcal/mol@LB@Unfolding Energy - sRNA 9.44565 kcal/mol@LB@@LB@Position - mRNA 20 -- 80@LB@Position - sRNA 100 -- 170@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 97 -- 103@LB@ |