| 168 |
0.04649 |
0.7403 |
lmo1875 |
N/A |
-18.37 |
0.021889 |
174 -- 204 |
150 -- 181 |
ABC transporter ATP-binding protein |
|
_____________173_______________205\n_____________|_________________|\n5'-ACA...AACAG__A______________AUGAA...GUU-3'\n______________GA_AUGGAUGGGAAUAA\n______________||_|||:|||::||:||\n______________CU_UACUUACUUUUGUU\n3'-GUU...GGUUA__C______________UAUUA...GGA-5'\n_____________|_________________|\n_____________182_______________149\n |
193 -- 199 |
155 -- 161 |
-14.111 kcal/mol |
2.1341 kcal/mol |
0.933796 kcal/mol |
173 205@LB@ | |@LB@5'-ACA...AACAG A AUGAA...GUU-3'@LB@ GA AUGGAUGGGAAUAA@LB@ || |||:|||::||:||@LB@ CU UACUUACUUUUGUU@LB@3'-GUU...GGUUA C UAUUA...GGA-5'@LB@ | |@LB@ 182 149@LB@@LB@@LB@Energy -18.37 kcal/mol@LB@Hybridization Energy -14.111 kcal/mol@LB@Unfolding Energy - mRNA 2.1341 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 174 -- 204@LB@Position - sRNA 150 -- 181@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 155 -- 161@LB@ |
| 154 |
0.04021 |
0.7027 |
lmo2008 |
N/A |
-17.88 |
0.027453 |
195 -- 258 |
157 -- 220 |
ABC transporter permease |
|
_____________194___________________259\n_____________|_____________________|\n5'-CAG...UGAAG____________AU_______GUCCG...UUG-3'\n______________CAGUGAG_UGAA__AGAACAA\n______________||:||||_||||__|:|||||\n______________GUUACUC_ACUU__UUUUGUU\n3'-GUU...UGCCG_______U____AC_______UAUUA...GGA-5'\n_____________|_____________________|\n_____________221___________________156\n |
233 -- 239 |
154 -- 160 |
-15.5955 kcal/mol |
3.58965 kcal/mol |
0.962339 kcal/mol |
194 259@LB@ | |@LB@5'-CAG...UGAAG AU GUCCG...UUG-3'@LB@ CAGUGAG UGAA AGAACAA@LB@ ||:|||| |||| |:|||||@LB@ GUUACUC ACUU UUUUGUU@LB@3'-GUU...UGCCG U AC UAUUA...GGA-5'@LB@ | |@LB@ 221 156@LB@@LB@@LB@Energy -17.88 kcal/mol@LB@Hybridization Energy -15.5955 kcal/mol@LB@Unfolding Energy - mRNA 3.58965 kcal/mol@LB@Unfolding Energy - sRNA 0.962339 kcal/mol@LB@@LB@Position - mRNA 195 -- 258@LB@Position - sRNA 157 -- 220@LB@Position Seed - mRNA 233 -- 239@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 41 |
0.008795 |
0.5772 |
lmo1984 |
ilvB |
-19.06 |
0.015768 |
187 -- 229 |
157 -- 201 |
acetolactate synthase |
|
_____________186____________________________________________230\n_____________|______________________________________________|\n5'-AUU...AAAAA_______G___A______UUG_____A_________CA________AGCGA...ACA-3'\n______________AUGAGGU_AUA_GCGUGA___AUACG__CGA__AGA__AAUGAAAA\n______________||||||:_|||_:|:|||___|:|||__|:|__|||__||||||||\n______________UACUCCG_UAU_UGUACU___UGUGC__GUU__UCU__UUACUUUU\n3'-GUU...UGCCC___________C______UGA_____CG___AC___AC________GUUUA...GGA-5'\n_____________|______________________________________________|\n_____________202____________________________________________156\n |
223 -- 229 |
157 -- 163 |
-31.6948 kcal/mol |
5.6221 kcal/mol |
13.9999 kcal/mol |
186 230@LB@ | |@LB@5'-AUU...AAAAA G A UUG A CA AGCGA...ACA-3'@LB@ AUGAGGU AUA GCGUGA AUACG CGA AGA AAUGAAAA@LB@ ||||||: ||| :|:||| |:||| |:| ||| ||||||||@LB@ UACUCCG UAU UGUACU UGUGC GUU UCU UUACUUUU@LB@3'-GUU...UGCCC C UGA CG AC AC GUUUA...GGA-5'@LB@ | |@LB@ 202 156@LB@@LB@@LB@Energy -19.06 kcal/mol@LB@Hybridization Energy -31.6948 kcal/mol@LB@Unfolding Energy - mRNA 5.6221 kcal/mol@LB@Unfolding Energy - sRNA 13.9999 kcal/mol@LB@@LB@Position - mRNA 187 -- 229@LB@Position - sRNA 157 -- 201@LB@Position Seed - mRNA 223 -- 229@LB@Position Seed - sRNA 157 -- 163@LB@ |
| 23 |
0.00382 |
0.4469 |
lmo1572 |
accA |
-20.61 |
0.007329 |
192 -- 226 |
157 -- 188 |
acetyl-CoA carboxylase carboxyltransferase subunit alpha |
|
_____________191______________________________________________________________________________227\n_____________|________________________________________________________________________________|\n5'-AGG...UUUAA__AU______GAAA__A____GA_____________A__UG__________________G___________AUU______ACCGA...CCA-3'\n______________GC__UCAUGU____GC_CCUG___GUAG_GGGGUGA_GU_______________AUGGC_AAUGAGAUGGA___UGAGAA\n______________||__||||||____||_|||:___:||:_|||:|||_|:_______________|:|||_|||||||||:|___|||:||\n______________CG__AGUACA____CG_GGAU___UAUU_CCCUACU_CG_______________UGCCG_UUACUCUACUU___ACUUUU\n3'-GUU...CGCAA__GU______AGCC__C____ACG____G_______C__UAUCUGUACUUGAUG_____G____________________GUUUA...GGA-5'\n_____________|________________________________________________________________________________|\n_____________189______________________________________________________________________________156\n |
211 -- 217 |
163 -- 169 |
-59.1532 kcal/mol |
18.9584 kcal/mol |
22.6787 kcal/mol |
191 227@LB@ | |@LB@5'-AGG...UUUAA AU GAAA A GA A UG G AUU ACCGA...CCA-3'@LB@ GC UCAUGU GC CCUG GUAG GGGGUGA GU AUGGC AAUGAGAUGGA UGAGAA@LB@ || |||||| || |||: :||: |||:||| |: |:||| |||||||||:| |||:||@LB@ CG AGUACA CG GGAU UAUU CCCUACU CG UGCCG UUACUCUACUU ACUUUU@LB@3'-GUU...CGCAA GU AGCC C ACG G C UAUCUGUACUUGAUG G GUUUA...GGA-5'@LB@ | |@LB@ 189 156@LB@@LB@@LB@Energy -20.61 kcal/mol@LB@Hybridization Energy -59.1532 kcal/mol@LB@Unfolding Energy - mRNA 18.9584 kcal/mol@LB@Unfolding Energy - sRNA 22.6787 kcal/mol@LB@@LB@Position - mRNA 192 -- 226@LB@Position - sRNA 157 -- 188@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 163 -- 169@LB@ |
| 132 |
0.03532 |
0.6968 |
lmo1773 |
purB |
-14.78 |
0.106383 |
9 -- 45 |
147 -- 186 |
adenylosuccinate lyase |
|
_____________8___________________________46\n_____________|___________________________|\n5'-AUA...AUGUU____CU_____________________AUUAU...CUU-3'\n______________GAUG__GUGAAU__AAACAAAUGGUGA\n______________:|||__:|||||__||||||||::|||\n______________UUAC__UACUUA__UUUGUUUAUUACU\n3'-GUU...GCCGG____UC______CU_____________AAAAC...GGA-5'\n_____________|___________________________|\n_____________187_________________________146\n |
33 -- 39 |
153 -- 159 |
-18.9825 kcal/mol |
5.01078 kcal/mol |
5.96192 kcal/mol |
8 46@LB@ | |@LB@5'-AUA...AUGUU CU AUUAU...CUU-3'@LB@ GAUG GUGAAU AAACAAAUGGUGA@LB@ :||| :||||| ||||||||::|||@LB@ UUAC UACUUA UUUGUUUAUUACU@LB@3'-GUU...GCCGG UC CU AAAAC...GGA-5'@LB@ | |@LB@ 187 146@LB@@LB@@LB@Energy -14.78 kcal/mol@LB@Hybridization Energy -18.9825 kcal/mol@LB@Unfolding Energy - mRNA 5.01078 kcal/mol@LB@Unfolding Energy - sRNA 5.96192 kcal/mol@LB@@LB@Position - mRNA 9 -- 45@LB@Position - sRNA 147 -- 186@LB@Position Seed - mRNA 33 -- 39@LB@Position Seed - sRNA 153 -- 159@LB@ |
| 65 |
0.01641 |
0.6733 |
lmo0040 |
N/A |
-17.01 |
0.040772 |
52 -- 100 |
171 -- 220 |
agmatine deiminase |
|
_____________51______________101\n_____________|_______________|\n5'-GUC...AAUAG____A__________GGGAC...CUG-3'\n______________GAGG_GAAUGAGGAU\n______________|||:_||||||::|:\n______________CUCU_CUUACUUUUG\n3'-GUU...GGUUA____A__________UUUAU...GGA-5'\n_____________|_______________|\n_____________221_____________170\n |
196 -- 202 |
156 -- 162 |
-15.5399 kcal/mol |
0.994344 kcal/mol |
0.916023 kcal/mol |
51 101@LB@ | |@LB@5'-GUC...AAUAG A GGGAC...CUG-3'@LB@ GAGG GAAUGAGGAU@LB@ |||: ||||||::|:@LB@ CUCU CUUACUUUUG@LB@3'-GUU...GGUUA A UUUAU...GGA-5'@LB@ | |@LB@ 221 170@LB@@LB@@LB@Energy -17.01 kcal/mol@LB@Hybridization Energy -15.5399 kcal/mol@LB@Unfolding Energy - mRNA 0.994344 kcal/mol@LB@Unfolding Energy - sRNA 0.916023 kcal/mol@LB@@LB@Position - mRNA 52 -- 100@LB@Position - sRNA 171 -- 220@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 156 -- 162@LB@ |
| 196 |
0.05638 |
0.7607 |
lmo2015 |
N/A |
-14.78 |
0.106466 |
232 -- 254 |
163 -- 185 |
alpha-mannosidase |
|
_____________231____________________________255\n_____________|______________________________|\n5'-GUA...ACUAA______________A___AGGCU_______GUUGC...UCC-3'\n______________AGAUA__AACUACG_GGC_____AGAUGAA\n______________|||:|__||||||:_|||_____|||||||\n______________UCUGU__UUGAUGU_CCG_____UCUACUU\n3'-GUU...CCGUA_____AC_______G___GUUAC_______ACUUU...GGA-5'\n_____________|______________________________|\n_____________186____________________________162\n |
248 -- 254 |
163 -- 169 |
-25.0473 kcal/mol |
4.43892 kcal/mol |
11.8636 kcal/mol |
231 255@LB@ | |@LB@5'-GUA...ACUAA A AGGCU GUUGC...UCC-3'@LB@ AGAUA AACUACG GGC AGAUGAA@LB@ |||:| ||||||: ||| |||||||@LB@ UCUGU UUGAUGU CCG UCUACUU@LB@3'-GUU...CCGUA AC G GUUAC ACUUU...GGA-5'@LB@ | |@LB@ 186 162@LB@@LB@@LB@Energy -14.78 kcal/mol@LB@Hybridization Energy -25.0473 kcal/mol@LB@Unfolding Energy - mRNA 4.43892 kcal/mol@LB@Unfolding Energy - sRNA 11.8636 kcal/mol@LB@@LB@Position - mRNA 232 -- 254@LB@Position - sRNA 163 -- 185@LB@Position Seed - mRNA 248 -- 254@LB@Position Seed - sRNA 163 -- 169@LB@ |
| 71 |
0.01891 |
0.6733 |
lmo2349 |
N/A |
-17.22 |
0.037183 |
66 -- 119 |
160 -- 206 |
amino acid ABC transporter substrate-binding protein |
|
_____________65______________________________________________________________________________________________________________________120\n_____________|_______________________________________________________________________________________________________________________|\n5'-ACC...GCACU___A_______CUUCUGCCAGA___________UG_______GA_____A__U__________________UU_______C__UUUU_A_______GA_G___________U_______UUAUG...AAG-3'\n______________GAC_CUUGGAA___________AAACA__UCCA__GUUGCUG__UAUGU_UC__GCGCC________GCGG__AUGAGGU_UA____G_ACAUGAG__A_ACGGC____GA_GUGGGUG\n______________|||_||:|:||___________|||||__||||__|||||::__:||||_||__|||||________:|||__||||||:_||____|_||||||:__|_|||||____||_:||::||\n______________CUG_GAGCUUU___________UUUGU__AGGU__CAACGGU__GUACA_AG__CGCGG________UGCC__UACUCCG_AU____C_UGUACUU__U_UGCCG____CU_UACUUAC\n___3'-GUUUUUUU___C_______A_______________AA____CG_______A_________CC_____AUACGUAU____C________U_______________GA_G_____GUUA__C_______UUUUG...GGA-5'\n_____________|_______________________________________________________________________________________________________________________|\n_____________207_____________________________________________________________________________________________________________________159\n |
107 -- 113 |
161 -- 167 |
-71.8793 kcal/mol |
29.0166 kcal/mol |
34.5254 kcal/mol |
65 120@LB@ | |@LB@5'-ACC...GCACU A CUUCUGCCAGA UG GA A U UU C UUUU A GA G U UUAUG...AAG-3'@LB@ GAC CUUGGAA AAACA UCCA GUUGCUG UAUGU UC GCGCC GCGG AUGAGGU UA G ACAUGAG A ACGGC GA GUGGGUG@LB@ ||| ||:|:|| ||||| |||| |||||:: :|||| || ||||| :||| ||||||: || | ||||||: | ||||| || :||::||@LB@ CUG GAGCUUU UUUGU AGGU CAACGGU GUACA AG CGCGG UGCC UACUCCG AU C UGUACUU U UGCCG CU UACUUAC@LB@ 3'-GUUUUUUU C A AA CG A CC AUACGUAU C U GA G GUUA C UUUUG...GGA-5'@LB@ | |@LB@ 207 159@LB@@LB@@LB@Energy -17.22 kcal/mol@LB@Hybridization Energy -71.8793 kcal/mol@LB@Unfolding Energy - mRNA 29.0166 kcal/mol@LB@Unfolding Energy - sRNA 34.5254 kcal/mol@LB@@LB@Position - mRNA 66 -- 119@LB@Position - sRNA 160 -- 206@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 161 -- 167@LB@ |
| 124 |
0.03258 |
0.6968 |
lmo1611 |
N/A |
-17.32 |
0.035574 |
130 -- 182 |
121 -- 173 |
aminopeptidase |
|
_____________129_______________________183\n_____________|_________________________|\n5'-CAU...AGAGA_______C___C_____________AUUUG...UUG-3'\n______________AGUGAGG_GAG_GGAAACGGAUAAU\n______________|:||||:_||:_|:||||::|||||\n______________UUACUCU_CUU_CUUUUGUUUAUUA\n3'-GUU...GCCGG_______A___A_____________CUAAA...GGA-5'\n_____________|_________________________|\n_____________174_______________________120\n |
143 -- 149 |
154 -- 160 |
-22.8649 kcal/mol |
4.94187 kcal/mol |
5.58154 kcal/mol |
129 183@LB@ | |@LB@5'-CAU...AGAGA C C AUUUG...UUG-3'@LB@ AGUGAGG GAG GGAAACGGAUAAU@LB@ |:||||: ||: |:||||::|||||@LB@ UUACUCU CUU CUUUUGUUUAUUA@LB@3'-GUU...GCCGG A A CUAAA...GGA-5'@LB@ | |@LB@ 174 120@LB@@LB@@LB@Energy -17.32 kcal/mol@LB@Hybridization Energy -22.8649 kcal/mol@LB@Unfolding Energy - mRNA 4.94187 kcal/mol@LB@Unfolding Energy - sRNA 5.58154 kcal/mol@LB@@LB@Position - mRNA 130 -- 182@LB@Position - sRNA 121 -- 173@LB@Position Seed - mRNA 143 -- 149@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 27 |
0.005046 |
0.5029 |
lmo2370 |
N/A |
-21.11 |
0.005698 |
252 -- 287 |
166 -- 205 |
aminotransferase |
|
_____________251_____________288\n_____________|_______________|\n5'-CCU...AUAAU_____C_________AGAAG...UGU-3'\n______________UGAGG_GAAUGAAAG\n______________||||:_||||||||:\n______________ACUCU_CUUACUUUU\n3'-GUU...CGGUU_____A_________GUUUA...GGA-5'\n_____________|_______________|\n_____________206_____________165\n |
176 -- 182 |
157 -- 163 |
-15.2487 kcal/mol |
2.36926 kcal/mol |
0.905109 kcal/mol |
251 288@LB@ | |@LB@5'-CCU...AUAAU C AGAAG...UGU-3'@LB@ UGAGG GAAUGAAAG@LB@ ||||: ||||||||:@LB@ ACUCU CUUACUUUU@LB@3'-GUU...CGGUU A GUUUA...GGA-5'@LB@ | |@LB@ 206 165@LB@@LB@@LB@Energy -21.11 kcal/mol@LB@Hybridization Energy -15.2487 kcal/mol@LB@Unfolding Energy - mRNA 2.36926 kcal/mol@LB@Unfolding Energy - sRNA 0.905109 kcal/mol@LB@@LB@Position - mRNA 252 -- 287@LB@Position - sRNA 166 -- 205@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 157 -- 163@LB@ |
