| 157 |
0.02703 |
0.5559 |
b3221 |
yhcH |
-9.14 |
0.148013 |
119 -- 127 |
77 -- 85 |
DUF386 family protein cupin superfamily |
|
_____________118_______128\n_____________|_________|\n5'-AUC...GGCAU_________AUUUA...AAG-3'\n______________UUCAUGUUG\n______________||||:||||\n______________AAGUGCAAC\n3'-CGC...UUUUC_________CGAAA...AAG-5'\n_____________|_________|\n_____________86________76\n |
121 -- 127 |
77 -- 83 |
-10.7393 kcal/mol |
1.16925 kcal/mol |
0.427568 kcal/mol |
118 128@LB@ | |@LB@5'-AUC...GGCAU AUUUA...AAG-3'@LB@ UUCAUGUUG@LB@ ||||:||||@LB@ AAGUGCAAC@LB@3'-CGC...UUUUC CGAAA...AAG-5'@LB@ | |@LB@ 86 76@LB@@LB@@LB@Energy -9.14 kcal/mol@LB@Hybridization Energy -10.7393 kcal/mol@LB@Unfolding Energy - mRNA 1.16925 kcal/mol@LB@Unfolding Energy - sRNA 0.427568 kcal/mol@LB@@LB@Position - mRNA 119 -- 127@LB@Position - sRNA 77 -- 85@LB@Position Seed - mRNA 121 -- 127@LB@Position Seed - sRNA 77 -- 83@LB@ |
| 49 |
0.01016 |
0.5385 |
b3354 |
yheU |
-13.31 |
0.027656 |
105 -- 118 |
71 -- 84 |
UPF0270 family protein |
|
_____________104____________119\n_____________|______________|\n5'-CUG...GGCGG______________UUGGC...GUA-3'\n______________UCAUGUUGGCUUUA\n______________|||:||||||||||\n______________AGUGCAACCGAAAU\n3'-CGC...UUUCA______________CAAUA...AAG-5'\n_____________|______________|\n_____________85_____________70\n |
112 -- 118 |
71 -- 77 |
-20.4483 kcal/mol |
6.58199 kcal/mol |
0.5567 kcal/mol |
104 119@LB@ | |@LB@5'-CUG...GGCGG UUGGC...GUA-3'@LB@ UCAUGUUGGCUUUA@LB@ |||:||||||||||@LB@ AGUGCAACCGAAAU@LB@3'-CGC...UUUCA CAAUA...AAG-5'@LB@ | |@LB@ 85 70@LB@@LB@@LB@Energy -13.31 kcal/mol@LB@Hybridization Energy -20.4483 kcal/mol@LB@Unfolding Energy - mRNA 6.58199 kcal/mol@LB@Unfolding Energy - sRNA 0.5567 kcal/mol@LB@@LB@Position - mRNA 105 -- 118@LB@Position - sRNA 71 -- 84@LB@Position Seed - mRNA 112 -- 118@LB@Position Seed - sRNA 71 -- 77@LB@ |
| 73 |
0.0135 |
0.5385 |
b3362 |
yhfG |
-12.23 |
0.043008 |
184 -- 212 |
50 -- 86 |
putative antitoxin for Fic |
|
_____________183___________________________________213\n_____________|_____________________________________|\n5'-GAU...GACAC_____G_GA___A__________A___GA________ACCGA...CUU-3'\n______________GUUCA_G__GGC_________UC_AGU__AGAAACUC\n______________|||||_|__|||_________||_|||__||||||||\n______________CAAGU_C__CCG_________AG_UCA__UCUUUGAG\n3'-CGC...GUUUU_____G_AA___AAAUCAAUA__C___AC________AGCUU...AAG-5'\n_____________|_____________________________________|\n_____________87____________________________________49\n |
206 -- 212 |
50 -- 56 |
-25.6976 kcal/mol |
9.05881 kcal/mol |
4.40785 kcal/mol |
183 213@LB@ | |@LB@5'-GAU...GACAC G GA A A GA ACCGA...CUU-3'@LB@ GUUCA G GGC UC AGU AGAAACUC@LB@ ||||| | ||| || ||| ||||||||@LB@ CAAGU C CCG AG UCA UCUUUGAG@LB@3'-CGC...GUUUU G AA AAAUCAAUA C AC AGCUU...AAG-5'@LB@ | |@LB@ 87 49@LB@@LB@@LB@Energy -12.23 kcal/mol@LB@Hybridization Energy -25.6976 kcal/mol@LB@Unfolding Energy - mRNA 9.05881 kcal/mol@LB@Unfolding Energy - sRNA 4.40785 kcal/mol@LB@@LB@Position - mRNA 184 -- 212@LB@Position - sRNA 50 -- 86@LB@Position Seed - mRNA 206 -- 212@LB@Position Seed - sRNA 50 -- 56@LB@ |
| 125 |
0.02168 |
0.5385 |
b3380 |
yhfW |
-9.99 |
0.106098 |
159 -- 190 |
48 -- 81 |
phosphopentomutase-related metalloenzyme superfamily protein |
|
_____________158_________________________________191\n_____________|___________________________________|\n5'-CUC...GAAAU___C___C________GAC___CUU__________UGGGG...GUG-3'\n______________CGU_GGU____GUUAU___AGU___GGAAACUCUC\n______________|||_||:____|||||___|||___:|||||||||\n______________GCA_CCG____CAAUA___UCA___UCUUUGAGAG\n3'-CGC...CAAGU___A___AAAU_____AGC___AC___________CUUUG...AAG-5'\n_____________|___________________________________|\n_____________82__________________________________47\n |
184 -- 190 |
48 -- 54 |
-22.1995 kcal/mol |
7.79728 kcal/mol |
4.41067 kcal/mol |
158 191@LB@ | |@LB@5'-CUC...GAAAU C C GAC CUU UGGGG...GUG-3'@LB@ CGU GGU GUUAU AGU GGAAACUCUC@LB@ ||| ||: ||||| ||| :|||||||||@LB@ GCA CCG CAAUA UCA UCUUUGAGAG@LB@3'-CGC...CAAGU A AAAU AGC AC CUUUG...AAG-5'@LB@ | |@LB@ 82 47@LB@@LB@@LB@Energy -9.99 kcal/mol@LB@Hybridization Energy -22.1995 kcal/mol@LB@Unfolding Energy - mRNA 7.79728 kcal/mol@LB@Unfolding Energy - sRNA 4.41067 kcal/mol@LB@@LB@Position - mRNA 159 -- 190@LB@Position - sRNA 48 -- 81@LB@Position Seed - mRNA 184 -- 190@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 102 |
0.01732 |
0.5385 |
b3442 |
yhhZ |
-11.63 |
0.054951 |
288 -- 294 |
75 -- 81 |
putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity |
|
_____________287_____295\n_____________|_______|\n5'-AUU...GUAAU_______AGAGCG-3'\n______________CGUUGGC\n______________|||||||\n______________GCAACCG\n3'-CGC...CAAGU_______AAAUC...AAG-5'\n_____________|_______|\n_____________82______74\n |
288 -- 294 |
75 -- 81 |
-12.2648 kcal/mol |
0.311297 kcal/mol |
0.324493 kcal/mol |
287 295@LB@ | |@LB@5'-AUU...GUAAU AGAGCG-3'@LB@ CGUUGGC@LB@ |||||||@LB@ GCAACCG@LB@3'-CGC...CAAGU AAAUC...AAG-5'@LB@ | |@LB@ 82 74@LB@@LB@@LB@Energy -11.63 kcal/mol@LB@Hybridization Energy -12.2648 kcal/mol@LB@Unfolding Energy - mRNA 0.311297 kcal/mol@LB@Unfolding Energy - sRNA 0.324493 kcal/mol@LB@@LB@Position - mRNA 288 -- 294@LB@Position - sRNA 75 -- 81@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 166 |
0.02918 |
0.5559 |
b3518 |
yhjA |
-9.21 |
0.144312 |
113 -- 127 |
71 -- 85 |
putative cytochrome C peroxidase |
|
_____________112_____________128\n_____________|_______________|\n5'-CCG...UGUUU______A________UCUCG...GCA-3'\n______________UUUAUG_UGGCUUUG\n______________||:|:|_|||||||:\n______________AAGUGC_ACCGAAAU\n3'-CGC...UUUUC______A________CAAUA...AAG-5'\n_____________|_______________|\n_____________86______________70\n |
121 -- 127 |
71 -- 77 |
-14.7899 kcal/mol |
5.0213 kcal/mol |
0.560731 kcal/mol |
112 128@LB@ | |@LB@5'-CCG...UGUUU A UCUCG...GCA-3'@LB@ UUUAUG UGGCUUUG@LB@ ||:|:| |||||||:@LB@ AAGUGC ACCGAAAU@LB@3'-CGC...UUUUC A CAAUA...AAG-5'@LB@ | |@LB@ 86 70@LB@@LB@@LB@Energy -9.21 kcal/mol@LB@Hybridization Energy -14.7899 kcal/mol@LB@Unfolding Energy - mRNA 5.0213 kcal/mol@LB@Unfolding Energy - sRNA 0.560731 kcal/mol@LB@@LB@Position - mRNA 113 -- 127@LB@Position - sRNA 71 -- 85@LB@Position Seed - mRNA 121 -- 127@LB@Position Seed - sRNA 71 -- 77@LB@ |
| 82 |
0.01477 |
0.5385 |
b3527 |
yhjJ |
-9.01 |
0.155560 |
190 -- 221 |
62 -- 91 |
putative periplasmic M16 family chaperone |
|
_____________189_______________________________222\n_____________|_________________________________|\n5'-CUC...UUGAU___________AUGCAG___ACAAAA_______CUUUU...GGC-3'\n______________CAGGGGUUCAC______GGC_______AUUCGA\n______________||:::||||||______|||_______||||||\n______________GUUUUCAAGUG______CCG_______UAAGCU\n3'-CGC...UAGGC___________CAA______AAAUCAA______CAACU...AAG-5'\n_____________|_________________________________|\n_____________92________________________________61\n |
194 -- 200 |
81 -- 87 |
-19.9715 kcal/mol |
6.94165 kcal/mol |
4.01597 kcal/mol |
189 222@LB@ | |@LB@5'-CUC...UUGAU AUGCAG ACAAAA CUUUU...GGC-3'@LB@ CAGGGGUUCAC GGC AUUCGA@LB@ ||:::|||||| ||| ||||||@LB@ GUUUUCAAGUG CCG UAAGCU@LB@3'-CGC...UAGGC CAA AAAUCAA CAACU...AAG-5'@LB@ | |@LB@ 92 61@LB@@LB@@LB@Energy -9.01 kcal/mol@LB@Hybridization Energy -19.9715 kcal/mol@LB@Unfolding Energy - mRNA 6.94165 kcal/mol@LB@Unfolding Energy - sRNA 4.01597 kcal/mol@LB@@LB@Position - mRNA 190 -- 221@LB@Position - sRNA 62 -- 91@LB@Position Seed - mRNA 194 -- 200@LB@Position Seed - sRNA 81 -- 87@LB@ |
| 119 |
0.02023 |
0.5385 |
b3579 |
yiaO |
-11.14 |
0.066893 |
104 -- 124 |
64 -- 84 |
2 3-diketo-L-gulonate-binding periplasmic protein |
|
_____________103_____________________125\n_____________|_______________________|\n5'-ACU...UUCCC______CC_______________AUUAU...AAA-3'\n______________UUACGU__UGGUUUUA__UAUUC\n______________|:||||__|||:||||__|||||\n______________AGUGCA__ACCGAAAU__AUAAG\n3'-CGC...UUUCA________________CA_____CUCAA...AAG-5'\n_____________|_______________________|\n_____________85______________________63\n |
113 -- 119 |
71 -- 77 |
-15.3214 kcal/mol |
3.60448 kcal/mol |
0.573392 kcal/mol |
103 125@LB@ | |@LB@5'-ACU...UUCCC CC AUUAU...AAA-3'@LB@ UUACGU UGGUUUUA UAUUC@LB@ |:|||| |||:|||| |||||@LB@ AGUGCA ACCGAAAU AUAAG@LB@3'-CGC...UUUCA CA CUCAA...AAG-5'@LB@ | |@LB@ 85 63@LB@@LB@@LB@Energy -11.14 kcal/mol@LB@Hybridization Energy -15.3214 kcal/mol@LB@Unfolding Energy - mRNA 3.60448 kcal/mol@LB@Unfolding Energy - sRNA 0.573392 kcal/mol@LB@@LB@Position - mRNA 104 -- 124@LB@Position - sRNA 64 -- 84@LB@Position Seed - mRNA 113 -- 119@LB@Position Seed - sRNA 71 -- 77@LB@ |
| 77 |
0.01396 |
0.5385 |
b3644 |
yicC |
-11.79 |
0.051421 |
238 -- 254 |
15 -- 31 |
UPF0701 family protein |
|
_____________237_______________255\n_____________|_________________|\n5'-UCU...UGAAA________GAAU_____AGCGC...AAA-3'\n______________UCAAGGGU____GGGGG\n______________||||||||____:|:||\n______________AGUUCCCA____UCUCC\n3'-CGC...ACUGA________AUUU_____ACGGC...AAG-5'\n_____________|_________________|\n_____________32________________14\n |
239 -- 245 |
24 -- 30 |
-20.4957 kcal/mol |
5.4171 kcal/mol |
3.28624 kcal/mol |
237 255@LB@ | |@LB@5'-UCU...UGAAA GAAU AGCGC...AAA-3'@LB@ UCAAGGGU GGGGG@LB@ |||||||| :|:||@LB@ AGUUCCCA UCUCC@LB@3'-CGC...ACUGA AUUU ACGGC...AAG-5'@LB@ | |@LB@ 32 14@LB@@LB@@LB@Energy -11.79 kcal/mol@LB@Hybridization Energy -20.4957 kcal/mol@LB@Unfolding Energy - mRNA 5.4171 kcal/mol@LB@Unfolding Energy - sRNA 3.28624 kcal/mol@LB@@LB@Position - mRNA 238 -- 254@LB@Position - sRNA 15 -- 31@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 24 -- 30@LB@ |
| 13 |
0.002299 |
0.5385 |
b3663 |
yicN |
-11.49 |
0.058154 |
241 -- 256 |
60 -- 78 |
DUF1198 family protein |
|
_____________240_________________257\n_____________|___________________|\n5'-CUU...GUUUG___________________GCUGA...AUC-3'\n______________UGGU__UGGUU_UUCGGGU\n______________|||:__|:|||_||||:||\n______________ACCG__AUCAA_AAGCUCA\n3'-CGC...GUGCA____AA_____U_______ACUCU...AAG-5'\n_____________|___________________|\n_____________79__________________59\n |
250 -- 256 |
60 -- 66 |
-15.2298 kcal/mol |
2.94333 kcal/mol |
0.797083 kcal/mol |
240 257@LB@ | |@LB@5'-CUU...GUUUG GCUGA...AUC-3'@LB@ UGGU UGGUU UUCGGGU@LB@ |||: |:||| ||||:||@LB@ ACCG AUCAA AAGCUCA@LB@3'-CGC...GUGCA AA U ACUCU...AAG-5'@LB@ | |@LB@ 79 59@LB@@LB@@LB@Energy -11.49 kcal/mol@LB@Hybridization Energy -15.2298 kcal/mol@LB@Unfolding Energy - mRNA 2.94333 kcal/mol@LB@Unfolding Energy - sRNA 0.797083 kcal/mol@LB@@LB@Position - mRNA 241 -- 256@LB@Position - sRNA 60 -- 78@LB@Position Seed - mRNA 250 -- 256@LB@Position Seed - sRNA 60 -- 66@LB@ |
