| 6 |
0.001395 |
0.4469 |
lmo2078 |
N/A |
-19.77 |
0.011149 |
188 -- 240 |
154 -- 207 |
|
|
_____________187___________________________________________________________________241\n_____________|_____________________________________________________________________|\n5'-GAU...UUUAU_____C______U__________U____UA____________AAUG____A_G________________UUCGA...AGG-3'\n______________UUUGG_GCGUCU_UGU_____GG_AUGA__UGUAGA___GAA____AUGG_C_GGUGAGGU_AAUGGAA\n______________||:||_|||:||_||:_____||_||||__::||||___|||____|:||_|_::||||:|_||||:||\n______________AAGCC_CGCGGA_ACG_____CC_UACU__GUAUCU___CUU____UGCC_G_UUACUCUA_UUACUUU\n3'-GUU...AGUAC____________U___UAUUG__C____CC______GUA___GAUG______G________C_______UGUUU...GGA-5'\n_____________|_____________________________________________________________________|\n_____________208___________________________________________________________________153\n |
200 -- 206 |
158 -- 164 |
-46.039 kcal/mol |
12.924 kcal/mol |
22.2029 kcal/mol |
187 241@LB@ | |@LB@5'-GAU...UUUAU C U U UA AAUG A G UUCGA...AGG-3'@LB@ UUUGG GCGUCU UGU GG AUGA UGUAGA GAA AUGG C GGUGAGGU AAUGGAA@LB@ ||:|| |||:|| ||: || |||| ::|||| ||| |:|| | ::||||:| ||||:||@LB@ AAGCC CGCGGA ACG CC UACU GUAUCU CUU UGCC G UUACUCUA UUACUUU@LB@3'-GUU...AGUAC U UAUUG C CC GUA GAUG G C UGUUU...GGA-5'@LB@ | |@LB@ 208 153@LB@@LB@@LB@Energy -19.77 kcal/mol@LB@Hybridization Energy -46.039 kcal/mol@LB@Unfolding Energy - mRNA 12.924 kcal/mol@LB@Unfolding Energy - sRNA 22.2029 kcal/mol@LB@@LB@Position - mRNA 188 -- 240@LB@Position - sRNA 154 -- 207@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 158 -- 164@LB@ |
| 165 |
0.04532 |
0.7392 |
lmo2091 |
argH |
-16.36 |
0.054421 |
189 -- 262 |
141 -- 199 |
argininosuccinate lyase |
|
_____________188_________________263\n_____________|___________________|\n5'-UCA...GGUCA_______G__GAG______AAAUC...AAG-3'\n______________UGCCAUU_UA___GGAAGA\n______________|||||||_||___||||||\n______________ACGGUAA_AU___CCUUCU\n3'-GUU...GAUCA_______G__AA_______ACCUA...GGA-5'\n_____________|___________________|\n_____________200_________________140\n |
20 -- 26 |
110 -- 116 |
-20.7676 kcal/mol |
3.64063 kcal/mol |
5.20705 kcal/mol |
188 263@LB@ | |@LB@5'-UCA...GGUCA G GAG AAAUC...AAG-3'@LB@ UGCCAUU UA GGAAGA@LB@ ||||||| || ||||||@LB@ ACGGUAA AU CCUUCU@LB@3'-GUU...GAUCA G AA ACCUA...GGA-5'@LB@ | |@LB@ 200 140@LB@@LB@@LB@Energy -16.36 kcal/mol@LB@Hybridization Energy -20.7676 kcal/mol@LB@Unfolding Energy - mRNA 3.64063 kcal/mol@LB@Unfolding Energy - sRNA 5.20705 kcal/mol@LB@@LB@Position - mRNA 189 -- 262@LB@Position - sRNA 141 -- 199@LB@Position Seed - mRNA 20 -- 26@LB@Position Seed - sRNA 110 -- 116@LB@ |
| 127 |
0.03392 |
0.6968 |
lmo2096 |
N/A |
-16.75 |
0.045974 |
122 -- 137 |
183 -- 198 |
PTS galacticol transporter subunit IIC |
|
_____________121___________________138\n_____________|_____________________|\n5'-UAG...UUUCU____A__C_____________GAAGA...UGA-3'\n______________UAAC_GG_AUG_GGCAUGGAC\n______________||||_||_|||_|||||:|||\n______________AUUG_CC_UAC_CCGUAUCUG\n3'-GUU...UACGU____C______U_________UACUU...GGA-5'\n_____________|_____________________|\n_____________199___________________182\n |
129 -- 135 |
191 -- 197 |
-23.3255 kcal/mol |
4.68556 kcal/mol |
9.82628 kcal/mol |
121 138@LB@ | |@LB@5'-UAG...UUUCU A C GAAGA...UGA-3'@LB@ UAAC GG AUG GGCAUGGAC@LB@ |||| || ||| |||||:|||@LB@ AUUG CC UAC CCGUAUCUG@LB@3'-GUU...UACGU C U UACUU...GGA-5'@LB@ | |@LB@ 199 182@LB@@LB@@LB@Energy -16.75 kcal/mol@LB@Hybridization Energy -23.3255 kcal/mol@LB@Unfolding Energy - mRNA 4.68556 kcal/mol@LB@Unfolding Energy - sRNA 9.82628 kcal/mol@LB@@LB@Position - mRNA 122 -- 137@LB@Position - sRNA 183 -- 198@LB@Position Seed - mRNA 129 -- 135@LB@Position Seed - sRNA 191 -- 197@LB@ |
| 10 |
0.002311 |
0.4469 |
lmo2106 |
N/A |
-20.89 |
0.006356 |
172 -- 222 |
159 -- 207 |
|
|
_____________171__________________________________________________223\n_____________|____________________________________________________|\n5'-AGU...UAAUA_______AC__CAA______G_____AAA____U__UUAA_______G____UUAUA...AUG-3'\n______________AAUGGGA__AG___CAUAGA_GUGAA____AUG_CU____AGAUGAA_UGGA\n______________||:||||__||___||||||_:||||____|:|_|:____|||||||_||:|\n______________UUGCCCU__UC___GUAUCU_UACUU____UGC_GG____UCUACUU_ACUU\n3'-GUU...ACGUA_______AC__C________G_____GAUG___C__UUAC____________UUGUU...GGA-5'\n_____________|____________________________________________________|\n_____________208__________________________________________________158\n |
211 -- 217 |
163 -- 169 |
-34.9864 kcal/mol |
6.68059 kcal/mol |
18.5724 kcal/mol |
171 223@LB@ | |@LB@5'-AGU...UAAUA AC CAA G AAA U UUAA G UUAUA...AUG-3'@LB@ AAUGGGA AG CAUAGA GUGAA AUG CU AGAUGAA UGGA@LB@ ||:|||| || |||||| :|||| |:| |: ||||||| ||:|@LB@ UUGCCCU UC GUAUCU UACUU UGC GG UCUACUU ACUU@LB@3'-GUU...ACGUA AC C G GAUG C UUAC UUGUU...GGA-5'@LB@ | |@LB@ 208 158@LB@@LB@@LB@Energy -20.89 kcal/mol@LB@Hybridization Energy -34.9864 kcal/mol@LB@Unfolding Energy - mRNA 6.68059 kcal/mol@LB@Unfolding Energy - sRNA 18.5724 kcal/mol@LB@@LB@Position - mRNA 172 -- 222@LB@Position - sRNA 159 -- 207@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 163 -- 169@LB@ |
| 184 |
0.05355 |
0.7607 |
lmo2119 |
N/A |
-15.99 |
0.064071 |
3 -- 81 |
95 -- 171 |
|
|
_____________2_________________________82\n_____________|_________________________|\n_________5'-CU______U______GU__________AUUAC...CCA-3'\n______________UGGGAU_AGUGAA__GACAGAUAGU\n______________||:|||_|:||||__:|||:|||:|\n______________ACUCUA_UUACUU__UUGUUUAUUA\n3'-GUU...CGGUU______C__________________CUAAA...GGA-5'\n_____________|_________________________|\n_____________172_______________________94\n |
18 -- 24 |
152 -- 158 |
-18.6088 kcal/mol |
3.83703 kcal/mol |
5.55637 kcal/mol |
2 82@LB@ | |@LB@ 5'-CU U GU AUUAC...CCA-3'@LB@ UGGGAU AGUGAA GACAGAUAGU@LB@ ||:||| |:|||| :|||:|||:|@LB@ ACUCUA UUACUU UUGUUUAUUA@LB@3'-GUU...CGGUU C CUAAA...GGA-5'@LB@ | |@LB@ 172 94@LB@@LB@@LB@Energy -15.99 kcal/mol@LB@Hybridization Energy -18.6088 kcal/mol@LB@Unfolding Energy - mRNA 3.83703 kcal/mol@LB@Unfolding Energy - sRNA 5.55637 kcal/mol@LB@@LB@Position - mRNA 3 -- 81@LB@Position - sRNA 95 -- 171@LB@Position Seed - mRNA 18 -- 24@LB@Position Seed - sRNA 152 -- 158@LB@ |
| 98 |
0.02549 |
0.6733 |
lmo2155 |
N/A |
-16.07 |
0.061955 |
240 -- 298 |
157 -- 207 |
ribonucleotide-diphosphate reductase subunit alpha |
|
_____________239________299\n_____________|__________|\n5'-UAU...UAAAA__________AACAG...AAA-3'\n______________GACGGGG_GA\n______________:|||||:_||\n______________UUGCCCU_CU\n3'-GUU...ACGUA_______A__CCGUA...GGA-5'\n_____________|__________|\n_____________208________156\n |
240 -- 246 |
201 -- 207 |
-11.5149 kcal/mol |
1.00175 kcal/mol |
0.374399 kcal/mol |
239 299@LB@ | |@LB@5'-UAU...UAAAA AACAG...AAA-3'@LB@ GACGGGG GA@LB@ :|||||: ||@LB@ UUGCCCU CU@LB@3'-GUU...ACGUA A CCGUA...GGA-5'@LB@ | |@LB@ 208 156@LB@@LB@@LB@Energy -16.07 kcal/mol@LB@Hybridization Energy -11.5149 kcal/mol@LB@Unfolding Energy - mRNA 1.00175 kcal/mol@LB@Unfolding Energy - sRNA 0.374399 kcal/mol@LB@@LB@Position - mRNA 240 -- 298@LB@Position - sRNA 157 -- 207@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 201 -- 207@LB@ |
| 114 |
0.02972 |
0.6968 |
lmo2166 |
N/A |
-15.48 |
0.079589 |
75 -- 119 |
153 -- 198 |
lmo2166 |
|
_____________74_________________________________________________120\n_____________|__________________________________________________|\n5'-GGA...UAUUC___U_____UG___U______CAU________________AA________ACCCA...AAA-3'\n______________AGG_CAUGG__AUG_AACUAC___CGGUCA______UGAA__GAAGACAA\n______________|||_|||:|__|||_||||||___|||:||______||||__|||:||||\n______________UCC_GUAUC__UAC_UUGAUG___GCCGGU______ACUU__CUUUUGUU\n3'-GUU...CCUAC_________UG__________U________UACUCU____A_________UAUUA...GGA-5'\n_____________|__________________________________________________|\n_____________199________________________________________________152\n |
112 -- 118 |
154 -- 160 |
-33.2648 kcal/mol |
10.6544 kcal/mol |
13.9801 kcal/mol |
74 120@LB@ | |@LB@5'-GGA...UAUUC U UG U CAU AA ACCCA...AAA-3'@LB@ AGG CAUGG AUG AACUAC CGGUCA UGAA GAAGACAA@LB@ ||| |||:| ||| |||||| |||:|| |||| |||:||||@LB@ UCC GUAUC UAC UUGAUG GCCGGU ACUU CUUUUGUU@LB@3'-GUU...CCUAC UG U UACUCU A UAUUA...GGA-5'@LB@ | |@LB@ 199 152@LB@@LB@@LB@Energy -15.48 kcal/mol@LB@Hybridization Energy -33.2648 kcal/mol@LB@Unfolding Energy - mRNA 10.6544 kcal/mol@LB@Unfolding Energy - sRNA 13.9801 kcal/mol@LB@@LB@Position - mRNA 75 -- 119@LB@Position - sRNA 153 -- 198@LB@Position Seed - mRNA 112 -- 118@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 103 |
0.02634 |
0.6733 |
lmo2183 |
N/A |
-17.72 |
0.029644 |
120 -- 189 |
95 -- 172 |
ferrichrome ABC transporter permease |
|
_____________119_______________190\n_____________|_________________|\n5'-AGA...UGUGU____UU___________UUAUU...UCC-3'\n______________AUGA__UGGAUGAAAAU\n______________||||__||:|||||||:\n______________UACU__ACUUACUUUUG\n3'-GUU...CCGGU____CU___________UUUAU...GGA-5'\n_____________|_________________|\n_____________173_______________94\n |
130 -- 136 |
156 -- 162 |
-14.4355 kcal/mol |
3.54286 kcal/mol |
0.922045 kcal/mol |
119 190@LB@ | |@LB@5'-AGA...UGUGU UU UUAUU...UCC-3'@LB@ AUGA UGGAUGAAAAU@LB@ |||| ||:|||||||:@LB@ UACU ACUUACUUUUG@LB@3'-GUU...CCGGU CU UUUAU...GGA-5'@LB@ | |@LB@ 173 94@LB@@LB@@LB@Energy -17.72 kcal/mol@LB@Hybridization Energy -14.4355 kcal/mol@LB@Unfolding Energy - mRNA 3.54286 kcal/mol@LB@Unfolding Energy - sRNA 0.922045 kcal/mol@LB@@LB@Position - mRNA 120 -- 189@LB@Position - sRNA 95 -- 172@LB@Position Seed - mRNA 130 -- 136@LB@Position Seed - sRNA 156 -- 162@LB@ |
| 99 |
0.02562 |
0.6733 |
lmo2201 |
N/A |
-18.35 |
0.022079 |
190 -- 255 |
101 -- 170 |
3-oxoacyl-ACP synthase |
|
_____________189_____________________________________________________________________256\n_____________|_______________________________________________________________________|\n5'-AAC...AUAAG________________________GAAGA__A___GUU__U______G__GCU___A___C__________ACGAU...AUG-3'\n______________GAGAUGAGU__AAAUGGAUAA_GA_____GU_GUU___AC_GGUGUU_GA___GUU__CA__CUAUUGGAA\n______________|||||||:|__|||:::||||_||_____||_||:___||_|:|||:_||___|||__||__|||||||||\n______________CUCUACUUA__UUUGUUUAUU_CU_____CA_CAG___UG_CUACAG_CU___CAA__GU__GAUAACCUU\n3'-GUU...GGUUA_________CU__________A__AAAAC______AUU__U______A__GAU___CG__AA_________CUACC...GGA-5'\n_____________|_______________________________________________________________________|\n_____________171_____________________________________________________________________100\n |
249 -- 255 |
101 -- 107 |
-41.8612 kcal/mol |
11.5076 kcal/mol |
19.339 kcal/mol |
189 256@LB@ | |@LB@5'-AAC...AUAAG GAAGA A GUU U G GCU A C ACGAU...AUG-3'@LB@ GAGAUGAGU AAAUGGAUAA GA GU GUU AC GGUGUU GA GUU CA CUAUUGGAA@LB@ |||||||:| |||:::|||| || || ||: || |:|||: || ||| || |||||||||@LB@ CUCUACUUA UUUGUUUAUU CU CA CAG UG CUACAG CU CAA GU GAUAACCUU@LB@3'-GUU...GGUUA CU A AAAAC AUU U A GAU CG AA CUACC...GGA-5'@LB@ | |@LB@ 171 100@LB@@LB@@LB@Energy -18.35 kcal/mol@LB@Hybridization Energy -41.8612 kcal/mol@LB@Unfolding Energy - mRNA 11.5076 kcal/mol@LB@Unfolding Energy - sRNA 19.339 kcal/mol@LB@@LB@Position - mRNA 190 -- 255@LB@Position - sRNA 101 -- 170@LB@Position Seed - mRNA 249 -- 255@LB@Position Seed - sRNA 101 -- 107@LB@ |
| 170 |
0.04745 |
0.7511 |
lmo2203 |
N/A |
-15.31 |
0.085499 |
133 -- 190 |
99 -- 165 |
N-acetylmuramoyl-L-alanine amidase |
|
_____________132___________________________________191\n_____________|_____________________________________|\n5'-AUA...AGGUU_________________A________AA_________ACUAA...CAG-3'\n______________AACAGA_____GAC_AG__GCCAUUU__AUUGGGGGA\n______________||||||_____|||_||__||||||:__|||||::||\n______________UUGUCU_____CUG_UC__CGGUAAG__UAACCUUCU\n3'-GUU...CAGAU______ACAGA___A__AA_______A__________ACCUA...GGA-5'\n_____________|_____________________________________|\n_____________166___________________________________98\n |
184 -- 190 |
99 -- 105 |
-25.8209 kcal/mol |
4.57897 kcal/mol |
9.42764 kcal/mol |
132 191@LB@ | |@LB@5'-AUA...AGGUU A AA ACUAA...CAG-3'@LB@ AACAGA GAC AG GCCAUUU AUUGGGGGA@LB@ |||||| ||| || ||||||: |||||::||@LB@ UUGUCU CUG UC CGGUAAG UAACCUUCU@LB@3'-GUU...CAGAU ACAGA A AA A ACCUA...GGA-5'@LB@ | |@LB@ 166 98@LB@@LB@@LB@Energy -15.31 kcal/mol@LB@Hybridization Energy -25.8209 kcal/mol@LB@Unfolding Energy - mRNA 4.57897 kcal/mol@LB@Unfolding Energy - sRNA 9.42764 kcal/mol@LB@@LB@Position - mRNA 133 -- 190@LB@Position - sRNA 99 -- 165@LB@Position Seed - mRNA 184 -- 190@LB@Position Seed - sRNA 99 -- 105@LB@ |
