180 |
0.05132 |
0.7607 |
lmo1643 |
N/A |
-15.34 |
0.084306 |
231 -- 286 |
157 -- 207 |
lmo1643 |
|
_____________230_______________287\n_____________|_________________|\n5'-CGA...UAGUA_______GAU_______AGAAG...CUG-3'\n______________AGUGAGG___AUGAAAA\n______________|:||||:___|||||||\n______________UUACUCU___UACUUUU\n3'-GUU...GCCGG_______ACU_______GUUUA...GGA-5'\n_____________|_________________|\n_____________208_______________156\n |
280 -- 286 |
157 -- 163 |
-13.3165 kcal/mol |
1.24234 kcal/mol |
0.930085 kcal/mol |
230 287@LB@ | |@LB@5'-CGA...UAGUA GAU AGAAG...CUG-3'@LB@ AGUGAGG AUGAAAA@LB@ |:||||: |||||||@LB@ UUACUCU UACUUUU@LB@3'-GUU...GCCGG ACU GUUUA...GGA-5'@LB@ | |@LB@ 208 156@LB@@LB@@LB@Energy -15.34 kcal/mol@LB@Hybridization Energy -13.3165 kcal/mol@LB@Unfolding Energy - mRNA 1.24234 kcal/mol@LB@Unfolding Energy - sRNA 0.930085 kcal/mol@LB@@LB@Position - mRNA 231 -- 286@LB@Position - sRNA 157 -- 207@LB@Position Seed - mRNA 280 -- 286@LB@Position Seed - sRNA 157 -- 163@LB@ |
32 |
0.006611 |
0.5515 |
lmo1649 |
N/A |
-18.63 |
0.019340 |
118 -- 153 |
171 -- 207 |
lmo1649 |
|
_____________117_____________________________________________________________154\n_____________|_______________________________________________________________|\n5'-GUA...UGUUA_______AGUAAU__UA______CG__________A_____UC__A_____G___________UACAA...AAA-3'\n______________CAUCGUG______GU__CU_UGC__GAUGGG_UGA_GCAUA__CG_G_ACU_ACGCGGCCAGU\n______________||||:||______|:__||_|||__:|:|||_|||_|||||__|:_|_|||_||:||||||:|\n______________GUAGUAC______CG__GA_ACG__UUGCCC_ACU_CGUAU__GU_C_UGA_UGUGCCGGUUA\n3'-GUU...CAACG_______AAGCC___CG__U___UA______U___C_____CU__A_U_______________CUCUA...GGA-5'\n_____________|_______________________________________________________________|\n_____________208_____________________________________________________________170\n |
147 -- 153 |
171 -- 177 |
-50.2657 kcal/mol |
18.2787 kcal/mol |
22.0434 kcal/mol |
117 154@LB@ | |@LB@5'-GUA...UGUUA AGUAAU UA CG A UC A G UACAA...AAA-3'@LB@ CAUCGUG GU CU UGC GAUGGG UGA GCAUA CG G ACU ACGCGGCCAGU@LB@ ||||:|| |: || ||| :|:||| ||| ||||| |: | ||| ||:||||||:|@LB@ GUAGUAC CG GA ACG UUGCCC ACU CGUAU GU C UGA UGUGCCGGUUA@LB@3'-GUU...CAACG AAGCC CG U UA U C CU A U CUCUA...GGA-5'@LB@ | |@LB@ 208 170@LB@@LB@@LB@Energy -18.63 kcal/mol@LB@Hybridization Energy -50.2657 kcal/mol@LB@Unfolding Energy - mRNA 18.2787 kcal/mol@LB@Unfolding Energy - sRNA 22.0434 kcal/mol@LB@@LB@Position - mRNA 118 -- 153@LB@Position - sRNA 171 -- 207@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 171 -- 177@LB@ |
89 |
0.02343 |
0.6733 |
lmo1651 |
N/A |
-15.38 |
0.082912 |
189 -- 217 |
147 -- 170 |
ABC transporter ATP-binding protein |
|
_____________188___________________________218\n_____________|_____________________________|\n5'-GAA...AGAAG______UAGCA___________UG_____ACAAG...UUC-3'\n______________GGGGUG_____GAUGGAAGCGA__AAUGA\n______________|:|:||_____:|||:||:|:|__|||||\n______________CUCUAC_____UUACUUUUGUU__UUACU\n3'-GUU...GGUUA______________________UA_____AAAAC...GGA-5'\n_____________|_____________________________|\n_____________171___________________________146\n |
204 -- 210 |
154 -- 160 |
-21.1438 kcal/mol |
4.28476 kcal/mol |
5.93585 kcal/mol |
188 218@LB@ | |@LB@5'-GAA...AGAAG UAGCA UG ACAAG...UUC-3'@LB@ GGGGUG GAUGGAAGCGA AAUGA@LB@ |:|:|| :|||:||:|:| |||||@LB@ CUCUAC UUACUUUUGUU UUACU@LB@3'-GUU...GGUUA UA AAAAC...GGA-5'@LB@ | |@LB@ 171 146@LB@@LB@@LB@Energy -15.38 kcal/mol@LB@Hybridization Energy -21.1438 kcal/mol@LB@Unfolding Energy - mRNA 4.28476 kcal/mol@LB@Unfolding Energy - sRNA 5.93585 kcal/mol@LB@@LB@Position - mRNA 189 -- 217@LB@Position - sRNA 147 -- 170@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 154 -- 160@LB@ |
2 |
0.0002774 |
0.3688 |
lmo1666 |
N/A |
-21.94 |
0.003684 |
151 -- 207 |
157 -- 207 |
peptidoglycan-linked protein |
lmo0333 |
_____________150____________208\n_____________|______________|\n5'-GUG...AGAUG______________GUAAA...CUC-3'\n______________GGGAUGAAUGAAAA\n______________|:||||||||||||\n______________CUCUACUUACUUUU\n3'-GUU...GGUUA______________GUUUA...GGA-5'\n_____________|______________|\n_____________208____________156\n |
201 -- 207 |
157 -- 163 |
-18.267 kcal/mol |
1.529 kcal/mol |
0.904482 kcal/mol |
150 208@LB@ | |@LB@5'-GUG...AGAUG GUAAA...CUC-3'@LB@ GGGAUGAAUGAAAA@LB@ |:||||||||||||@LB@ CUCUACUUACUUUU@LB@3'-GUU...GGUUA GUUUA...GGA-5'@LB@ | |@LB@ 208 156@LB@@LB@@LB@Energy -21.94 kcal/mol@LB@Hybridization Energy -18.267 kcal/mol@LB@Unfolding Energy - mRNA 1.529 kcal/mol@LB@Unfolding Energy - sRNA 0.904482 kcal/mol@LB@@LB@Position - mRNA 151 -- 207@LB@Position - sRNA 157 -- 207@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |
7 |
0.001816 |
0.4469 |
lmo1666 |
N/A |
-21.94 |
0.003684 |
151 -- 207 |
157 -- 207 |
peptidoglycan-linked protein |
lmo0333 |
_____________150____________208\n_____________|______________|\n5'-GUG...AGAUG______________GUAAA...CUC-3'\n______________GGGAUGAAUGAAAA\n______________|:||||||||||||\n______________CUCUACUUACUUUU\n3'-GUU...GGUUA______________GUUUA...GGA-5'\n_____________|______________|\n_____________208____________156\n |
201 -- 207 |
157 -- 163 |
-18.267 kcal/mol |
1.529 kcal/mol |
0.904482 kcal/mol |
150 208@LB@ | |@LB@5'-GUG...AGAUG GUAAA...CUC-3'@LB@ GGGAUGAAUGAAAA@LB@ |:||||||||||||@LB@ CUCUACUUACUUUU@LB@3'-GUU...GGUUA GUUUA...GGA-5'@LB@ | |@LB@ 208 156@LB@@LB@@LB@Energy -21.94 kcal/mol@LB@Hybridization Energy -18.267 kcal/mol@LB@Unfolding Energy - mRNA 1.529 kcal/mol@LB@Unfolding Energy - sRNA 0.904482 kcal/mol@LB@@LB@Position - mRNA 151 -- 207@LB@Position - sRNA 157 -- 207@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |
8 |
0.001816 |
0.4469 |
lmo1666 |
N/A |
-21.94 |
0.003684 |
151 -- 207 |
157 -- 207 |
peptidoglycan-linked protein |
lmo0333 |
_____________150____________208\n_____________|______________|\n5'-GUG...AGAUG______________GUAAA...CUC-3'\n______________GGGAUGAAUGAAAA\n______________|:||||||||||||\n______________CUCUACUUACUUUU\n3'-GUU...GGUUA______________GUUUA...GGA-5'\n_____________|______________|\n_____________208____________156\n |
201 -- 207 |
157 -- 163 |
-18.267 kcal/mol |
1.529 kcal/mol |
0.904482 kcal/mol |
150 208@LB@ | |@LB@5'-GUG...AGAUG GUAAA...CUC-3'@LB@ GGGAUGAAUGAAAA@LB@ |:||||||||||||@LB@ CUCUACUUACUUUU@LB@3'-GUU...GGUUA GUUUA...GGA-5'@LB@ | |@LB@ 208 156@LB@@LB@@LB@Energy -21.94 kcal/mol@LB@Hybridization Energy -18.267 kcal/mol@LB@Unfolding Energy - mRNA 1.529 kcal/mol@LB@Unfolding Energy - sRNA 0.904482 kcal/mol@LB@@LB@Position - mRNA 151 -- 207@LB@Position - sRNA 157 -- 207@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |
22 |
0.003708 |
0.4469 |
lmo1689 |
N/A |
-20.94 |
0.006216 |
185 -- 218 |
155 -- 186 |
A/G-specific adenine glycosylase |
|
_____________184________________________________219\n_____________|__________________________________|\n5'-UGA...UAUUA________A__GGAA_______AA________G_CUAAC...CGU-3'\n______________GAAUUACG_GG____AAUGAGA__AAUGAAGA_A\n______________|||:|||:_||____|||||||__||||||:|_|\n______________CUUGAUGU_CC____UUACUCU__UUACUUUU_U\n3'-GUU...CUGUA________G__GG_________AC________G_UUAUU...GGA-5'\n_____________|__________________________________|\n_____________187________________________________154\n |
210 -- 216 |
157 -- 163 |
-27.9128 kcal/mol |
3.65812 kcal/mol |
9.66922 kcal/mol |
184 219@LB@ | |@LB@5'-UGA...UAUUA A GGAA AA G CUAAC...CGU-3'@LB@ GAAUUACG GG AAUGAGA AAUGAAGA A@LB@ |||:|||: || ||||||| ||||||:| |@LB@ CUUGAUGU CC UUACUCU UUACUUUU U@LB@3'-GUU...CUGUA G GG AC G UUAUU...GGA-5'@LB@ | |@LB@ 187 154@LB@@LB@@LB@Energy -20.94 kcal/mol@LB@Hybridization Energy -27.9128 kcal/mol@LB@Unfolding Energy - mRNA 3.65812 kcal/mol@LB@Unfolding Energy - sRNA 9.66922 kcal/mol@LB@@LB@Position - mRNA 185 -- 218@LB@Position - sRNA 155 -- 186@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 157 -- 163@LB@ |
150 |
0.03884 |
0.6968 |
lmo1709 |
N/A |
-16.64 |
0.048121 |
221 -- 241 |
163 -- 181 |
methionine aminopeptidase |
|
_____________220__________242\n_____________|____________|\n5'-UCA...GAAAU____________AGCAG...CUG-3'\n______________CGAUGAGAUGAA\n______________|:||||||||||\n______________GUUACUCUACUU\n3'-GUU...UGCCG____________ACUUU...GGA-5'\n_____________|____________|\n_____________182__________162\n |
235 -- 241 |
163 -- 169 |
-15.3561 kcal/mol |
3.44721 kcal/mol |
0.694462 kcal/mol |
220 242@LB@ | |@LB@5'-UCA...GAAAU AGCAG...CUG-3'@LB@ CGAUGAGAUGAA@LB@ |:||||||||||@LB@ GUUACUCUACUU@LB@3'-GUU...UGCCG ACUUU...GGA-5'@LB@ | |@LB@ 182 162@LB@@LB@@LB@Energy -16.64 kcal/mol@LB@Hybridization Energy -15.3561 kcal/mol@LB@Unfolding Energy - mRNA 3.44721 kcal/mol@LB@Unfolding Energy - sRNA 0.694462 kcal/mol@LB@@LB@Position - mRNA 221 -- 241@LB@Position - sRNA 163 -- 181@LB@Position Seed - mRNA 235 -- 241@LB@Position Seed - sRNA 163 -- 169@LB@ |
140 |
0.0365 |
0.6968 |
lmo1717 |
N/A |
-17.46 |
0.033387 |
195 -- 217 |
147 -- 170 |
|
|
_____________194______________________218\n_____________|________________________|\n5'-UAG...AGUAG____C___________________AACAC...AAA-3'\n______________GAGA__GAUGAAAAUGGAUAGUGA\n______________||||__:|||||||:::|||:|||\n______________CUCU__UUACUUUUGUUUAUUACU\n3'-GUU...GGUUA____AC__________________AAAAC...GGA-5'\n_____________|________________________|\n_____________171______________________146\n |
203 -- 209 |
155 -- 161 |
-21.6361 kcal/mol |
2.67158 kcal/mol |
5.93585 kcal/mol |
194 218@LB@ | |@LB@5'-UAG...AGUAG C AACAC...AAA-3'@LB@ GAGA GAUGAAAAUGGAUAGUGA@LB@ |||| :|||||||:::|||:|||@LB@ CUCU UUACUUUUGUUUAUUACU@LB@3'-GUU...GGUUA AC AAAAC...GGA-5'@LB@ | |@LB@ 171 146@LB@@LB@@LB@Energy -17.46 kcal/mol@LB@Hybridization Energy -21.6361 kcal/mol@LB@Unfolding Energy - mRNA 2.67158 kcal/mol@LB@Unfolding Energy - sRNA 5.93585 kcal/mol@LB@@LB@Position - mRNA 195 -- 217@LB@Position - sRNA 147 -- 170@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 155 -- 161@LB@ |
58 |
0.0137 |
0.6248 |
lmo1724 |
N/A |
-17.96 |
0.026530 |
144 -- 212 |
156 -- 211 |
ABC transporter ATP-binding protein |
|
_____________143__________213\n_____________|____________|\n5'-UUA...CAACC____________CUGAU...UCA-3'\n______________AUGAAUGAAAAC\n______________||||||||||||\n______________UACUUACUUUUG\n3'-GUU...UACUC____________UUUAU...GGA-5'\n_____________|____________|\n_____________212__________155\n |
206 -- 212 |
156 -- 162 |
-13.4321 kcal/mol |
1.37849 kcal/mol |
0.849227 kcal/mol |
143 213@LB@ | |@LB@5'-UUA...CAACC CUGAU...UCA-3'@LB@ AUGAAUGAAAAC@LB@ ||||||||||||@LB@ UACUUACUUUUG@LB@3'-GUU...UACUC UUUAU...GGA-5'@LB@ | |@LB@ 212 155@LB@@LB@@LB@Energy -17.96 kcal/mol@LB@Hybridization Energy -13.4321 kcal/mol@LB@Unfolding Energy - mRNA 1.37849 kcal/mol@LB@Unfolding Energy - sRNA 0.849227 kcal/mol@LB@@LB@Position - mRNA 144 -- 212@LB@Position - sRNA 156 -- 211@LB@Position Seed - mRNA 206 -- 212@LB@Position Seed - sRNA 156 -- 162@LB@ |