| 114 |
0.007692 |
0.2368 |
b0584 |
fepA |
-13.71 |
0.055244 |
241 -- 265 |
1 -- 26 |
ferrienterobactin outer membrane transporter |
|
_____________240________________________266\n_____________|__________________________|\n5'-GAA...CAAUC___________U____U____CA___ACAAG...ACG-3'\n______________UGGGGAU_UUA_GGGG_AGCG__GGC\n______________||||||:_|:|_:|::_|||:__|||\n______________ACCCCUG_AGU_UCUU_UCGU__CCG\n3'-UUU...GUUUU_______U___U____U____CA___-5'\n_____________|_________________________|\n_____________27________________________1\n |
241 -- 247 |
20 -- 26 |
-24.8633 kcal/mol |
8.63835 kcal/mol |
2.51842 kcal/mol |
240 266@LB@ | |@LB@5'-GAA...CAAUC U U CA ACAAG...ACG-3'@LB@ UGGGGAU UUA GGGG AGCG GGC@LB@ ||||||: |:| :|:: |||: |||@LB@ ACCCCUG AGU UCUU UCGU CCG@LB@3'-UUU...GUUUU U U U CA -5'@LB@ | |@LB@ 27 1@LB@@LB@@LB@Energy -13.71 kcal/mol@LB@Hybridization Energy -24.8633 kcal/mol@LB@Unfolding Energy - mRNA 8.63835 kcal/mol@LB@Unfolding Energy - sRNA 2.51842 kcal/mol@LB@@LB@Position - mRNA 241 -- 265@LB@Position - sRNA 1 -- 26@LB@Position Seed - mRNA 241 -- 247@LB@Position Seed - sRNA 20 -- 26@LB@ |
| 116 |
0.007938 |
0.2401 |
b0008 |
talB |
-12.38 |
0.104625 |
254 -- 276 |
7 -- 26 |
transaldolase B |
|
_____________253_____________________277\n_____________|_______________________|\n5'-AGG...GACAC___________C__CAAU_____UGUAU...CAA-3'\n______________UGGGGACAUCG_GG____GAAGC\n______________||||||||||:_:|____:||||\n______________ACCCCUGUAGU_UC____UUUCG\n3'-UUU...GUUUU___________U__U________UCACCG-5'\n_____________|_______________________|\n_____________27______________________6\n |
258 -- 264 |
16 -- 22 |
-23.5048 kcal/mol |
10.4229 kcal/mol |
0.706388 kcal/mol |
253 277@LB@ | |@LB@5'-AGG...GACAC C CAAU UGUAU...CAA-3'@LB@ UGGGGACAUCG GG GAAGC@LB@ ||||||||||: :| :||||@LB@ ACCCCUGUAGU UC UUUCG@LB@3'-UUU...GUUUU U U UCACCG-5'@LB@ | |@LB@ 27 6@LB@@LB@@LB@Energy -12.38 kcal/mol@LB@Hybridization Energy -23.5048 kcal/mol@LB@Unfolding Energy - mRNA 10.4229 kcal/mol@LB@Unfolding Energy - sRNA 0.706388 kcal/mol@LB@@LB@Position - mRNA 254 -- 276@LB@Position - sRNA 7 -- 26@LB@Position Seed - mRNA 258 -- 264@LB@Position Seed - sRNA 16 -- 22@LB@ |
| 117 |
0.008014 |
0.2404 |
b3052 |
hldE |
-12.77 |
0.087254 |
132 -- 161 |
1 -- 30 |
heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase |
|
_____________131______________________________162\n_____________|________________________________|\n5'-GCG...UGGCA_______CUG___G_____AU___________AUUAU...CGC-3'\n______________GAAGUGG____GU_GAAGA__GAAGUA_UGGU\n______________:||:|||____:|_:||||__:|||:|_|||:\n______________UUUUACC____UA_UUUCU__UUUCGU_ACCG\n3'-UUU...AGGUG_______CCUG__G_____________C____-5'\n_____________|_______________________________|\n_____________31______________________________1\n |
132 -- 138 |
24 -- 30 |
-21.0542 kcal/mol |
5.76621 kcal/mol |
2.51911 kcal/mol |
131 162@LB@ | |@LB@5'-GCG...UGGCA CUG G AU AUUAU...CGC-3'@LB@ GAAGUGG GU GAAGA GAAGUA UGGU@LB@ :||:||| :| :|||| :|||:| |||:@LB@ UUUUACC UA UUUCU UUUCGU ACCG@LB@3'-UUU...AGGUG CCUG G C -5'@LB@ | |@LB@ 31 1@LB@@LB@@LB@Energy -12.77 kcal/mol@LB@Hybridization Energy -21.0542 kcal/mol@LB@Unfolding Energy - mRNA 5.76621 kcal/mol@LB@Unfolding Energy - sRNA 2.51911 kcal/mol@LB@@LB@Position - mRNA 132 -- 161@LB@Position - sRNA 1 -- 30@LB@Position Seed - mRNA 132 -- 138@LB@Position Seed - sRNA 24 -- 30@LB@ |
| 118 |
0.008241 |
0.2451 |
b3394 |
hofN |
-17.25 |
0.007000 |
1 -- 22 |
2 -- 26 |
DNA catabolic putative fimbrial assembly protein |
|
______________1________________________23\n______________|________________________|\n___________5'-_____________CU__________GGAUG...CCG-3'\n______________UGGGGGCG_CAAA____GGCGGUGG\n______________|||||:|:_||||____:||:||||\n______________ACCCCUGU_GUUU____UCGUCACC\n3'-UUU...GUUUU________A____CUUU________G-5'\n_____________|_________________________|\n_____________27________________________1\n |
16 -- 22 |
2 -- 8 |
-29.7277 kcal/mol |
9.95926 kcal/mol |
2.5184 kcal/mol |
1 23@LB@ | |@LB@ 5'- CU GGAUG...CCG-3'@LB@ UGGGGGCG CAAA GGCGGUGG@LB@ |||||:|: |||| :||:||||@LB@ ACCCCUGU GUUU UCGUCACC@LB@3'-UUU...GUUUU A CUUU G-5'@LB@ | |@LB@ 27 1@LB@@LB@@LB@Energy -17.25 kcal/mol@LB@Hybridization Energy -29.7277 kcal/mol@LB@Unfolding Energy - mRNA 9.95926 kcal/mol@LB@Unfolding Energy - sRNA 2.5184 kcal/mol@LB@@LB@Position - mRNA 1 -- 22@LB@Position - sRNA 2 -- 26@LB@Position Seed - mRNA 16 -- 22@LB@Position Seed - sRNA 2 -- 8@LB@ |
| 119 |
0.008338 |
0.2459 |
b0123 |
cueO |
-14.31 |
0.040489 |
47 -- 61 |
9 -- 24 |
multicopper oxidase (laccase) |
|
_____________46_______________62\n_____________|________________|\n5'-CUG...UACCA________________UAAAC...CGU-3'\n______________GGGGC_UUAAAGAAGA\n______________|||:|_|:||||||:|\n______________CCCUG_AGUUUCUUUU\n3'-UUU...UUUAC_____U__________CGUCACCG-5'\n_____________|________________|\n_____________25_______________8\n |
55 -- 61 |
9 -- 15 |
-17.0719 kcal/mol |
2.10565 kcal/mol |
0.659805 kcal/mol |
46 62@LB@ | |@LB@5'-CUG...UACCA UAAAC...CGU-3'@LB@ GGGGC UUAAAGAAGA@LB@ |||:| |:||||||:|@LB@ CCCUG AGUUUCUUUU@LB@3'-UUU...UUUAC U CGUCACCG-5'@LB@ | |@LB@ 25 8@LB@@LB@@LB@Energy -14.31 kcal/mol@LB@Hybridization Energy -17.0719 kcal/mol@LB@Unfolding Energy - mRNA 2.10565 kcal/mol@LB@Unfolding Energy - sRNA 0.659805 kcal/mol@LB@@LB@Position - mRNA 47 -- 61@LB@Position - sRNA 9 -- 24@LB@Position Seed - mRNA 55 -- 61@LB@Position Seed - sRNA 9 -- 15@LB@ |
| 120 |
0.00842 |
0.2462 |
b1068 |
yceM |
-12.88 |
0.082928 |
190 -- 205 |
9 -- 24 |
putative oxidoreductase |
|
_____________189______________206\n_____________|________________|\n5'-GCG...CAUCU____G_______U___AAAAU...GAG-3'\n______________GGGA_AUUAAAG_GAA\n______________||||_||:||||_:||\n______________CCCU_UAGUUUC_UUU\n3'-UUU...UUUAC____G_______U___CGUCACCG-5'\n_____________|________________|\n_____________25_______________8\n |
195 -- 201 |
13 -- 19 |
-15.5519 kcal/mol |
2.0153 kcal/mol |
0.659805 kcal/mol |
189 206@LB@ | |@LB@5'-GCG...CAUCU G U AAAAU...GAG-3'@LB@ GGGA AUUAAAG GAA@LB@ |||| ||:|||| :||@LB@ CCCU UAGUUUC UUU@LB@3'-UUU...UUUAC G U CGUCACCG-5'@LB@ | |@LB@ 25 8@LB@@LB@@LB@Energy -12.88 kcal/mol@LB@Hybridization Energy -15.5519 kcal/mol@LB@Unfolding Energy - mRNA 2.0153 kcal/mol@LB@Unfolding Energy - sRNA 0.659805 kcal/mol@LB@@LB@Position - mRNA 190 -- 205@LB@Position - sRNA 9 -- 24@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 121 |
0.008566 |
0.2484 |
b3466 |
yhhL |
-13.33 |
0.066537 |
119 -- 150 |
1 -- 32 |
DUF1145 family protein |
|
_____________118_________________________________151\n_____________|___________________________________|\n5'-GUU...UUCCA_____C___UCAUU_____________________GGGUC...UUA-3'\n______________GCAAA_UGG_____ACAUC_GGGAAAA__AGUGGC\n______________:||||_|||_____|||||_::|||||__||||||\n______________UGUUU_ACC_____UGUAG_UUCUUUU__UCACCG\n3'-UUU...CGAGG_____U___CC________U_______CG______-5'\n_____________|__________________________________|\n_____________33_________________________________1\n |
138 -- 144 |
9 -- 15 |
-23.4834 kcal/mol |
7.61069 kcal/mol |
2.53929 kcal/mol |
118 151@LB@ | |@LB@5'-GUU...UUCCA C UCAUU GGGUC...UUA-3'@LB@ GCAAA UGG ACAUC GGGAAAA AGUGGC@LB@ :|||| ||| ||||| ::||||| ||||||@LB@ UGUUU ACC UGUAG UUCUUUU UCACCG@LB@3'-UUU...CGAGG U CC U CG -5'@LB@ | |@LB@ 33 1@LB@@LB@@LB@Energy -13.33 kcal/mol@LB@Hybridization Energy -23.4834 kcal/mol@LB@Unfolding Energy - mRNA 7.61069 kcal/mol@LB@Unfolding Energy - sRNA 2.53929 kcal/mol@LB@@LB@Position - mRNA 119 -- 150@LB@Position - sRNA 1 -- 32@LB@Position Seed - mRNA 138 -- 144@LB@Position Seed - sRNA 9 -- 15@LB@ |
| 122 |
0.008886 |
0.2491 |
b4366 |
bglJ |
-14.76 |
0.031763 |
19 -- 32 |
15 -- 29 |
bgl operon transcriptional activator |
|
_____________18______________33\n_____________|_______________|\n5'-CUG...GUAAA_______________CCAGA...GUA-3'\n______________GGAUGGGG_CAUCAA\n______________::||||||_||||||\n______________UUUACCCC_GUAGUU\n3'-UUU...GGUGU________U______UCUUU...CCG-5'\n_____________|_______________|\n_____________30______________14\n |
20 -- 26 |
22 -- 28 |
-19.2746 kcal/mol |
3.84044 kcal/mol |
0.677927 kcal/mol |
18 33@LB@ | |@LB@5'-CUG...GUAAA CCAGA...GUA-3'@LB@ GGAUGGGG CAUCAA@LB@ ::|||||| ||||||@LB@ UUUACCCC GUAGUU@LB@3'-UUU...GGUGU U UCUUU...CCG-5'@LB@ | |@LB@ 30 14@LB@@LB@@LB@Energy -14.76 kcal/mol@LB@Hybridization Energy -19.2746 kcal/mol@LB@Unfolding Energy - mRNA 3.84044 kcal/mol@LB@Unfolding Energy - sRNA 0.677927 kcal/mol@LB@@LB@Position - mRNA 19 -- 32@LB@Position - sRNA 15 -- 29@LB@Position Seed - mRNA 20 -- 26@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 123 |
0.008923 |
0.2491 |
b3243 |
aaeR |
-15.21 |
0.024673 |
72 -- 99 |
1 -- 34 |
transcriptional regulator for aaeXAB operon |
|
_____________71_________________________________100\n_____________|__________________________________|\n5'-AAC...UGUCG________AA__________________C_____GAGAG...UCA-3'\n______________CCGCAGAG___GGGCAU____GGAAAGC_G_GGC\n______________||:||:|:___||:|||____|:|||||_|_|||\n______________GGUGUUUU___CCUGUA____CUUUUCG_C_CCG\n3'-UUU...CCCGA________ACC______GUUU_______U_A___-5'\n_____________|_________________________________|\n_____________35________________________________1\n |
88 -- 94 |
7 -- 13 |
-28.4227 kcal/mol |
8.94529 kcal/mol |
4.26884 kcal/mol |
71 100@LB@ | |@LB@5'-AAC...UGUCG AA C GAGAG...UCA-3'@LB@ CCGCAGAG GGGCAU GGAAAGC G GGC@LB@ ||:||:|: ||:||| |:||||| | |||@LB@ GGUGUUUU CCUGUA CUUUUCG C CCG@LB@3'-UUU...CCCGA ACC GUUU U A -5'@LB@ | |@LB@ 35 1@LB@@LB@@LB@Energy -15.21 kcal/mol@LB@Hybridization Energy -28.4227 kcal/mol@LB@Unfolding Energy - mRNA 8.94529 kcal/mol@LB@Unfolding Energy - sRNA 4.26884 kcal/mol@LB@@LB@Position - mRNA 72 -- 99@LB@Position - sRNA 1 -- 34@LB@Position Seed - mRNA 88 -- 94@LB@Position Seed - sRNA 7 -- 13@LB@ |
| 124 |
0.008958 |
0.2491 |
b0124 |
gcd |
-13.85 |
0.051383 |
179 -- 193 |
48 -- 62 |
glucose dehydrogenase |
|
_____________178_____________194\n_____________|_______________|\n5'-UAA...AUUAA_______________UCUCU...GGC-3'\n______________UGAAUUGAAAUGGUG\n______________||||::|||||||:|\n______________ACUUGGCUUUACCGC\n3'-UUU...UUGGA_______________CCCAA...CCG-5'\n_____________|_______________|\n_____________63______________47\n |
187 -- 193 |
48 -- 54 |
-20.4838 kcal/mol |
2.67361 kcal/mol |
3.96136 kcal/mol |
178 194@LB@ | |@LB@5'-UAA...AUUAA UCUCU...GGC-3'@LB@ UGAAUUGAAAUGGUG@LB@ ||||::|||||||:|@LB@ ACUUGGCUUUACCGC@LB@3'-UUU...UUGGA CCCAA...CCG-5'@LB@ | |@LB@ 63 47@LB@@LB@@LB@Energy -13.85 kcal/mol@LB@Hybridization Energy -20.4838 kcal/mol@LB@Unfolding Energy - mRNA 2.67361 kcal/mol@LB@Unfolding Energy - sRNA 3.96136 kcal/mol@LB@@LB@Position - mRNA 179 -- 193@LB@Position - sRNA 48 -- 62@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 48 -- 54@LB@ |
