43 |
0.0004631 |
0.03766 |
b4346 |
mcrB |
-12.47 |
0.007188 |
270 -- 300 |
1 -- 31 |
5-methylcytosine-specific restriction enzyme McrBC subunit McrB |
|
_____________269_______________________________300\n_____________|_________________________________|\n5'-UUU...CCACU______UAUCC_________________A_____-3'\n______________AAAGAU_____AACGUCUUACC___GUA_CCUGC\n______________||||||_____|||:|||||||___|||_|||:|\n______________UUUCUA_____UUGUAGAAUGG___CAU_GGAUG\n3'-AUU...CAGAC______UC______________AGA___G_____-5'\n_____________|_________________________________|\n_____________32________________________________1\n |
285 -- 291 |
13 -- 19 |
-24.3421 kcal/mol |
3.83264 kcal/mol |
8.05889 kcal/mol |
269 300@LB@ | |@LB@5'-UUU...CCACU UAUCC A -3'@LB@ AAAGAU AACGUCUUACC GUA CCUGC@LB@ |||||| |||:||||||| ||| |||:|@LB@ UUUCUA UUGUAGAAUGG CAU GGAUG@LB@3'-AUU...CAGAC UC AGA G -5'@LB@ | |@LB@ 32 1@LB@@LB@@LB@Energy -12.47 kcal/mol@LB@Hybridization Energy -24.3421 kcal/mol@LB@Unfolding Energy - mRNA 3.83264 kcal/mol@LB@Unfolding Energy - sRNA 8.05889 kcal/mol@LB@@LB@Position - mRNA 270 -- 300@LB@Position - sRNA 1 -- 31@LB@Position Seed - mRNA 285 -- 291@LB@Position Seed - sRNA 13 -- 19@LB@ |
63 |
0.001074 |
0.05856 |
b0448 |
mdlA |
-11.87 |
0.011698 |
129 -- 162 |
4 -- 28 |
putative multidrug ABC transporter ATPase |
|
_____________128________________________________163\n_____________|__________________________________|\n5'-UGG...UUCGC_________GA__AAAUACACC______U_____AUCGA...UGG-3'\n______________GAUGGAACA__UU_________ACUUCU_UACCC\n______________|||:|||||__||_________||:|||_|||||\n______________CUAUCUUGU__AA_________UGGAGA_AUGGG\n3'-AUU...ACUUU_________AG_________________C_____AUG-5'\n_____________|__________________________________|\n_____________29_________________________________3\n |
131 -- 137 |
20 -- 26 |
-24.4185 kcal/mol |
4.52675 kcal/mol |
8.04825 kcal/mol |
128 163@LB@ | |@LB@5'-UGG...UUCGC GA AAAUACACC U AUCGA...UGG-3'@LB@ GAUGGAACA UU ACUUCU UACCC@LB@ |||:||||| || ||:||| |||||@LB@ CUAUCUUGU AA UGGAGA AUGGG@LB@3'-AUU...ACUUU AG C AUG-5'@LB@ | |@LB@ 29 3@LB@@LB@@LB@Energy -11.87 kcal/mol@LB@Hybridization Energy -24.4185 kcal/mol@LB@Unfolding Energy - mRNA 4.52675 kcal/mol@LB@Unfolding Energy - sRNA 8.04825 kcal/mol@LB@@LB@Position - mRNA 129 -- 162@LB@Position - sRNA 4 -- 28@LB@Position Seed - mRNA 131 -- 137@LB@Position Seed - sRNA 20 -- 26@LB@ |
92 |
0.002567 |
0.09816 |
b4120 |
melB |
-8.04 |
0.151444 |
195 -- 202 |
1 -- 8 |
melibiose:sodium symporter |
|
_____________194______203\n_____________|________|\n5'-AUA...CCCGA________GAGCA...ACA-3'\n______________UACCCUAU\n______________|||||||:\n______________AUGGGAUG\n3'-AUU...GAGAC________-5'\n_____________|_______|\n_____________9_______1\n |
196 -- 202 |
1 -- 7 |
-10.9179 kcal/mol |
0.779946 kcal/mol |
2.11603 kcal/mol |
194 203@LB@ | |@LB@5'-AUA...CCCGA GAGCA...ACA-3'@LB@ UACCCUAU@LB@ |||||||:@LB@ AUGGGAUG@LB@3'-AUU...GAGAC -5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -8.04 kcal/mol@LB@Hybridization Energy -10.9179 kcal/mol@LB@Unfolding Energy - mRNA 0.779946 kcal/mol@LB@Unfolding Energy - sRNA 2.11603 kcal/mol@LB@@LB@Position - mRNA 195 -- 202@LB@Position - sRNA 1 -- 8@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 1 -- 7@LB@ |
134 |
0.004727 |
0.1241 |
b1655 |
mepH |
-9.70 |
0.055155 |
231 -- 243 |
1 -- 13 |
murein DD-endopeptidase space-maker hydrolase |
|
_____________230___________244\n_____________|_____________|\n5'-CGU...UCACG_____________UUUUU...AGA-3'\n______________CUCUGUGCUUUAC\n______________||||||:|::|||\n______________GAGACAUGGGAUG\n3'-AUU...GAAUG_____________-5'\n_____________|____________|\n_____________14___________1\n |
237 -- 243 |
1 -- 7 |
-18.9465 kcal/mol |
4.13106 kcal/mol |
5.13393 kcal/mol |
230 244@LB@ | |@LB@5'-CGU...UCACG UUUUU...AGA-3'@LB@ CUCUGUGCUUUAC@LB@ ||||||:|::|||@LB@ GAGACAUGGGAUG@LB@3'-AUU...GAAUG -5'@LB@ | |@LB@ 14 1@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -18.9465 kcal/mol@LB@Unfolding Energy - mRNA 4.13106 kcal/mol@LB@Unfolding Energy - sRNA 5.13393 kcal/mol@LB@@LB@Position - mRNA 231 -- 243@LB@Position - sRNA 1 -- 13@LB@Position Seed - mRNA 237 -- 243@LB@Position Seed - sRNA 1 -- 7@LB@ |
122 |
0.004081 |
0.1177 |
b3940 |
metL |
-10.48 |
0.032541 |
261 -- 280 |
41 -- 59 |
Bifunctional aspartokinase/homoserine dehydrogenase 2 |
|
_____________260__________________281\n_____________|____________________|\n5'-ACG...GCAGU_______CUG__________UUAUU...GCA-3'\n______________AGUCUGG___AUGUGAAGUG\n______________|:||:|:___|:|||||||:\n______________UUAGGCU___UGCACUUCAU\n3'-AUU...UCGGU_______AA___________UUUCC...AUG-5'\n_____________|____________________|\n_____________60___________________40\n |
274 -- 280 |
41 -- 47 |
-17.3741 kcal/mol |
3.59224 kcal/mol |
3.31634 kcal/mol |
260 281@LB@ | |@LB@5'-ACG...GCAGU CUG UUAUU...GCA-3'@LB@ AGUCUGG AUGUGAAGUG@LB@ |:||:|: |:|||||||:@LB@ UUAGGCU UGCACUUCAU@LB@3'-AUU...UCGGU AA UUUCC...AUG-5'@LB@ | |@LB@ 60 40@LB@@LB@@LB@Energy -10.48 kcal/mol@LB@Hybridization Energy -17.3741 kcal/mol@LB@Unfolding Energy - mRNA 3.59224 kcal/mol@LB@Unfolding Energy - sRNA 3.31634 kcal/mol@LB@@LB@Position - mRNA 261 -- 280@LB@Position - sRNA 41 -- 59@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 41 -- 47@LB@ |
58 |
0.000878 |
0.0531 |
b2150 |
mglB |
-10.24 |
0.038484 |
153 -- 179 |
1 -- 24 |
methyl-galactoside transporter subunit |
|
_____________152__________________________180\n_____________|____________________________|\n5'-GUA...CCGCC______________AAGCAC________AUAAG...AUA-3'\n______________GAGCAUU_UAUCUC______UACCCUGC\n______________||:|||:_||:|||______||||||:|\n______________CUUGUAG_AUGGAG______AUGGGAUG\n3'-AUU...UCUAU_______A______AC____________-5'\n_____________|___________________________|\n_____________25__________________________1\n |
173 -- 179 |
1 -- 7 |
-24.5136 kcal/mol |
6.27388 kcal/mol |
8.02158 kcal/mol |
152 180@LB@ | |@LB@5'-GUA...CCGCC AAGCAC AUAAG...AUA-3'@LB@ GAGCAUU UAUCUC UACCCUGC@LB@ ||:|||: ||:||| ||||||:|@LB@ CUUGUAG AUGGAG AUGGGAUG@LB@3'-AUU...UCUAU A AC -5'@LB@ | |@LB@ 25 1@LB@@LB@@LB@Energy -10.24 kcal/mol@LB@Hybridization Energy -24.5136 kcal/mol@LB@Unfolding Energy - mRNA 6.27388 kcal/mol@LB@Unfolding Energy - sRNA 8.02158 kcal/mol@LB@@LB@Position - mRNA 153 -- 179@LB@Position - sRNA 1 -- 24@LB@Position Seed - mRNA 173 -- 179@LB@Position Seed - sRNA 1 -- 7@LB@ |
159 |
0.006413 |
0.1413 |
b4242 |
mgtA |
-7.15 |
0.243258 |
247 -- 262 |
45 -- 58 |
magnesium transporter |
|
_____________246______________263\n_____________|________________|\n5'-GGU...UUCCC________CAU_____UCCAU...UGG-3'\n______________GUCUGGUU___CGUGA\n______________:||:|:||___|||||\n______________UAGGCUAA___GCACU\n3'-AUU...CGGUU________U_______UCAUU...AUG-5'\n_____________|________________|\n_____________59_______________44\n |
248 -- 254 |
51 -- 57 |
-12.639 kcal/mol |
3.2244 kcal/mol |
2.28003 kcal/mol |
246 263@LB@ | |@LB@5'-GGU...UUCCC CAU UCCAU...UGG-3'@LB@ GUCUGGUU CGUGA@LB@ :||:|:|| |||||@LB@ UAGGCUAA GCACU@LB@3'-AUU...CGGUU U UCAUU...AUG-5'@LB@ | |@LB@ 59 44@LB@@LB@@LB@Energy -7.15 kcal/mol@LB@Hybridization Energy -12.639 kcal/mol@LB@Unfolding Energy - mRNA 3.2244 kcal/mol@LB@Unfolding Energy - sRNA 2.28003 kcal/mol@LB@@LB@Position - mRNA 247 -- 262@LB@Position - sRNA 45 -- 58@LB@Position Seed - mRNA 248 -- 254@LB@Position Seed - sRNA 51 -- 57@LB@ |
100 |
0.003115 |
0.1096 |
b0353 |
mhpT |
-8.28 |
0.132596 |
137 -- 146 |
48 -- 57 |
3-hydroxyphenylpropionic transporter |
|
_____________136________147\n_____________|__________|\n5'-CGG...AUAGU__________CGGCU...CGG-3'\n______________UCUGAUUACG\n______________||:|||||||\n______________AGGCUAAUGC\n3'-AUU...GGUUU__________ACUUC...AUG-5'\n_____________|__________|\n_____________58_________47\n |
140 -- 146 |
48 -- 54 |
-13.4725 kcal/mol |
3.61374 kcal/mol |
1.55976 kcal/mol |
136 147@LB@ | |@LB@5'-CGG...AUAGU CGGCU...CGG-3'@LB@ UCUGAUUACG@LB@ ||:|||||||@LB@ AGGCUAAUGC@LB@3'-AUU...GGUUU ACUUC...AUG-5'@LB@ | |@LB@ 58 47@LB@@LB@@LB@Energy -8.28 kcal/mol@LB@Hybridization Energy -13.4725 kcal/mol@LB@Unfolding Energy - mRNA 3.61374 kcal/mol@LB@Unfolding Energy - sRNA 1.55976 kcal/mol@LB@@LB@Position - mRNA 137 -- 146@LB@Position - sRNA 48 -- 57@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 48 -- 54@LB@ |
197 |
0.00873 |
0.1558 |
b2324 |
mnmC |
-9.11 |
0.080832 |
111 -- 120 |
52 -- 61 |
fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme |
|
_____________110________121\n_____________|__________|\n5'-GCU...CCGAA__________CAGCC...ACG-3'\n______________CAAGUCCGAU\n______________|||:||||||\n______________GUUUAGGCUA\n3'-AUU...AGUCG__________AUGCA...AUG-5'\n_____________|__________|\n_____________62_________51\n |
114 -- 120 |
52 -- 58 |
-12.6788 kcal/mol |
1.38997 kcal/mol |
2.20422 kcal/mol |
110 121@LB@ | |@LB@5'-GCU...CCGAA CAGCC...ACG-3'@LB@ CAAGUCCGAU@LB@ |||:||||||@LB@ GUUUAGGCUA@LB@3'-AUU...AGUCG AUGCA...AUG-5'@LB@ | |@LB@ 62 51@LB@@LB@@LB@Energy -9.11 kcal/mol@LB@Hybridization Energy -12.6788 kcal/mol@LB@Unfolding Energy - mRNA 1.38997 kcal/mol@LB@Unfolding Energy - sRNA 2.20422 kcal/mol@LB@@LB@Position - mRNA 111 -- 120@LB@Position - sRNA 52 -- 61@LB@Position Seed - mRNA 114 -- 120@LB@Position Seed - sRNA 52 -- 58@LB@ |
125 |
0.004186 |
0.1178 |
b0781 |
moaA |
-8.90 |
0.091954 |
79 -- 99 |
4 -- 23 |
molybdopterin biosynthesis protein A |
|
_____________78____________________100\n_____________|_____________________|\n5'-ACG...CACUA____C___A_______C____GGGUC...CGG-3'\n______________AACA_UCU_GCCUCUG_ACCU\n______________||||_|||_:||||||_|||:\n______________UUGU_AGA_UGGAGAC_UGGG\n3'-AUU...CUAUC________A_______A____AUG-5'\n_____________|_____________________|\n_____________24____________________3\n |
88 -- 94 |
9 -- 15 |
-21.7522 kcal/mol |
4.86496 kcal/mol |
8.01134 kcal/mol |
78 100@LB@ | |@LB@5'-ACG...CACUA C A C GGGUC...CGG-3'@LB@ AACA UCU GCCUCUG ACCU@LB@ |||| ||| :|||||| |||:@LB@ UUGU AGA UGGAGAC UGGG@LB@3'-AUU...CUAUC A A AUG-5'@LB@ | |@LB@ 24 3@LB@@LB@@LB@Energy -8.90 kcal/mol@LB@Hybridization Energy -21.7522 kcal/mol@LB@Unfolding Energy - mRNA 4.86496 kcal/mol@LB@Unfolding Energy - sRNA 8.01134 kcal/mol@LB@@LB@Position - mRNA 79 -- 99@LB@Position - sRNA 4 -- 23@LB@Position Seed - mRNA 88 -- 94@LB@Position Seed - sRNA 9 -- 15@LB@ |