| 14 |
0.002739 |
0.5385 |
b0903 |
pflB |
-11.82 |
0.050867 |
80 -- 105 |
57 -- 81 |
formate C-acetyltransferase 1 anaerobic; pyruvate formate-lyase 1 |
|
_____________79_________________________106\n_____________|__________________________|\n5'-CAC...AUUAU__G____GGUUU____G_________CAUAC...ACU-3'\n______________CG_UGGU_____GUUG_UUGGGUUGA\n______________||_|||:_____|||:_|:|:|||||\n______________GC_ACCG_____CAAU_AGCUCAACU\n3'-CGC...CAAGU__A____AAAU_____A_________CUUUG...AAG-5'\n_____________|__________________________|\n_____________82_________________________56\n |
99 -- 105 |
57 -- 63 |
-19.5015 kcal/mol |
6.38537 kcal/mol |
1.29708 kcal/mol |
79 106@LB@ | |@LB@5'-CAC...AUUAU G GGUUU G CAUAC...ACU-3'@LB@ CG UGGU GUUG UUGGGUUGA@LB@ || |||: |||: |:|:|||||@LB@ GC ACCG CAAU AGCUCAACU@LB@3'-CGC...CAAGU A AAAU A CUUUG...AAG-5'@LB@ | |@LB@ 82 56@LB@@LB@@LB@Energy -11.82 kcal/mol@LB@Hybridization Energy -19.5015 kcal/mol@LB@Unfolding Energy - mRNA 6.38537 kcal/mol@LB@Unfolding Energy - sRNA 1.29708 kcal/mol@LB@@LB@Position - mRNA 80 -- 105@LB@Position - sRNA 57 -- 81@LB@Position Seed - mRNA 99 -- 105@LB@Position Seed - sRNA 57 -- 63@LB@ |
| 77 |
0.01396 |
0.5385 |
b3644 |
yicC |
-11.79 |
0.051421 |
238 -- 254 |
15 -- 31 |
UPF0701 family protein |
|
_____________237_______________255\n_____________|_________________|\n5'-UCU...UGAAA________GAAU_____AGCGC...AAA-3'\n______________UCAAGGGU____GGGGG\n______________||||||||____:|:||\n______________AGUUCCCA____UCUCC\n3'-CGC...ACUGA________AUUU_____ACGGC...AAG-5'\n_____________|_________________|\n_____________32________________14\n |
239 -- 245 |
24 -- 30 |
-20.4957 kcal/mol |
5.4171 kcal/mol |
3.28624 kcal/mol |
237 255@LB@ | |@LB@5'-UCU...UGAAA GAAU AGCGC...AAA-3'@LB@ UCAAGGGU GGGGG@LB@ |||||||| :|:||@LB@ AGUUCCCA UCUCC@LB@3'-CGC...ACUGA AUUU ACGGC...AAG-5'@LB@ | |@LB@ 32 14@LB@@LB@@LB@Energy -11.79 kcal/mol@LB@Hybridization Energy -20.4957 kcal/mol@LB@Unfolding Energy - mRNA 5.4171 kcal/mol@LB@Unfolding Energy - sRNA 3.28624 kcal/mol@LB@@LB@Position - mRNA 238 -- 254@LB@Position - sRNA 15 -- 31@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 24 -- 30@LB@ |
| 159 |
0.02757 |
0.5559 |
b2701 |
mltB |
-11.73 |
0.052671 |
73 -- 129 |
32 -- 90 |
membrane-bound lytic murein transglycosylase B |
|
_____________72_________________________________________________________________130\n_____________|__________________________________________________________________|\n5'-AGA...UGAAU_____GAUA___AG__GAA_________________UUAUGU___G_____UAU____________ACCGC...GAA-3'\n______________AAAAG____GCG__GG___________UGAGUUGAG______AAA_UC_CG___CGGGCAGUGACU\n______________|||||____:||__||___________:||||||||______|||_||_||___||||||||||||\n______________UUUUC____UGC__CC___________GCUCAACUC______UUU_AG_GC___GCCCGUCACUGA\n3'-CGC...AGGCG_____AAG____AA__GAAAUCAAUAA__________________G__A__UUU____________AGUUC...AAG-5'\n_____________|__________________________________________________________________|\n_____________91_________________________________________________________________31\n |
94 -- 100 |
56 -- 62 |
-46.1733 kcal/mol |
15.4898 kcal/mol |
18.9502 kcal/mol |
72 130@LB@ | |@LB@5'-AGA...UGAAU GAUA AG GAA UUAUGU G UAU ACCGC...GAA-3'@LB@ AAAAG GCG GG UGAGUUGAG AAA UC CG CGGGCAGUGACU@LB@ ||||| :|| || :|||||||| ||| || || ||||||||||||@LB@ UUUUC UGC CC GCUCAACUC UUU AG GC GCCCGUCACUGA@LB@3'-CGC...AGGCG AAG AA GAAAUCAAUAA G A UUU AGUUC...AAG-5'@LB@ | |@LB@ 91 31@LB@@LB@@LB@Energy -11.73 kcal/mol@LB@Hybridization Energy -46.1733 kcal/mol@LB@Unfolding Energy - mRNA 15.4898 kcal/mol@LB@Unfolding Energy - sRNA 18.9502 kcal/mol@LB@@LB@Position - mRNA 73 -- 129@LB@Position - sRNA 32 -- 90@LB@Position Seed - mRNA 94 -- 100@LB@Position Seed - sRNA 56 -- 62@LB@ |
| 135 |
0.02294 |
0.5385 |
b4254 |
argI |
-11.70 |
0.053356 |
4 -- 33 |
59 -- 85 |
ornithine carbamoyltransferase 1 |
b0273 |
_____________3______________________________34\n_____________|______________________________|\n________5'-UUC______C__UU___CC________C_____UGCCA...AUA-3'\n______________UUCACG_UG__CUU__AGUUGUUC_GGGUU\n______________||||||_||__|||__||||:|||_|:|||\n______________AAGUGC_AC__GAA__UCAAUAAG_CUCAA\n3'-CGC...UUUUC______A__C____A_______________CUCUU...AAG-5'\n_____________|______________________________|\n_____________86_____________________________58\n |
21 -- 27 |
64 -- 70 |
-19.7051 kcal/mol |
6.29613 kcal/mol |
1.70749 kcal/mol |
3 34@LB@ | |@LB@ 5'-UUC C UU CC C UGCCA...AUA-3'@LB@ UUCACG UG CUU AGUUGUUC GGGUU@LB@ |||||| || ||| ||||:||| |:|||@LB@ AAGUGC AC GAA UCAAUAAG CUCAA@LB@3'-CGC...UUUUC A C A CUCUU...AAG-5'@LB@ | |@LB@ 86 58@LB@@LB@@LB@Energy -11.70 kcal/mol@LB@Hybridization Energy -19.7051 kcal/mol@LB@Unfolding Energy - mRNA 6.29613 kcal/mol@LB@Unfolding Energy - sRNA 1.70749 kcal/mol@LB@@LB@Position - mRNA 4 -- 33@LB@Position - sRNA 59 -- 85@LB@Position Seed - mRNA 21 -- 27@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 101 |
0.01678 |
0.5385 |
b0452 |
tesB |
-11.66 |
0.054224 |
159 -- 170 |
73 -- 84 |
acyl-CoA thioesterase 2 |
|
_____________158__________171\n_____________|____________|\n5'-CAA...UCAAC____U_______GCUGC...AGG-3'\n______________UCAC_UUGGCUU\n______________||||_|||||||\n______________AGUG_AACCGAA\n3'-CGC...UUUCA____C_______AUCAA...AAG-5'\n_____________|____________|\n_____________85___________72\n |
164 -- 170 |
73 -- 79 |
-14.9501 kcal/mol |
2.7795 kcal/mol |
0.508835 kcal/mol |
158 171@LB@ | |@LB@5'-CAA...UCAAC U GCUGC...AGG-3'@LB@ UCAC UUGGCUU@LB@ |||| |||||||@LB@ AGUG AACCGAA@LB@3'-CGC...UUUCA C AUCAA...AAG-5'@LB@ | |@LB@ 85 72@LB@@LB@@LB@Energy -11.66 kcal/mol@LB@Hybridization Energy -14.9501 kcal/mol@LB@Unfolding Energy - mRNA 2.7795 kcal/mol@LB@Unfolding Energy - sRNA 0.508835 kcal/mol@LB@@LB@Position - mRNA 159 -- 170@LB@Position - sRNA 73 -- 84@LB@Position Seed - mRNA 164 -- 170@LB@Position Seed - sRNA 73 -- 79@LB@ |
| 25 |
0.004715 |
0.5385 |
b0009 |
mog |
-11.66 |
0.054310 |
209 -- 227 |
68 -- 85 |
molybdochelatase incorporating molybdenum into molybdopterin |
|
_____________208__________________228\n_____________|____________________|\n5'-UGG...AAUAC_______AU___________UCCAU...CAU-3'\n______________UUUACGU__UGGC_UUAGUU\n______________||:||||__||||_||||||\n______________AAGUGCA__ACCG_AAUCAA\n3'-CGC...UUUUC_____________A______UAAGC...AAG-5'\n_____________|____________________|\n_____________86___________________67\n |
209 -- 215 |
79 -- 85 |
-16.6663 kcal/mol |
4.44065 kcal/mol |
0.567776 kcal/mol |
208 228@LB@ | |@LB@5'-UGG...AAUAC AU UCCAU...CAU-3'@LB@ UUUACGU UGGC UUAGUU@LB@ ||:|||| |||| ||||||@LB@ AAGUGCA ACCG AAUCAA@LB@3'-CGC...UUUUC A UAAGC...AAG-5'@LB@ | |@LB@ 86 67@LB@@LB@@LB@Energy -11.66 kcal/mol@LB@Hybridization Energy -16.6663 kcal/mol@LB@Unfolding Energy - mRNA 4.44065 kcal/mol@LB@Unfolding Energy - sRNA 0.567776 kcal/mol@LB@@LB@Position - mRNA 209 -- 227@LB@Position - sRNA 68 -- 85@LB@Position Seed - mRNA 209 -- 215@LB@Position Seed - sRNA 79 -- 85@LB@ |
| 102 |
0.01732 |
0.5385 |
b3442 |
yhhZ |
-11.63 |
0.054951 |
288 -- 294 |
75 -- 81 |
putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity |
|
_____________287_____295\n_____________|_______|\n5'-AUU...GUAAU_______AGAGCG-3'\n______________CGUUGGC\n______________|||||||\n______________GCAACCG\n3'-CGC...CAAGU_______AAAUC...AAG-5'\n_____________|_______|\n_____________82______74\n |
288 -- 294 |
75 -- 81 |
-12.2648 kcal/mol |
0.311297 kcal/mol |
0.324493 kcal/mol |
287 295@LB@ | |@LB@5'-AUU...GUAAU AGAGCG-3'@LB@ CGUUGGC@LB@ |||||||@LB@ GCAACCG@LB@3'-CGC...CAAGU AAAUC...AAG-5'@LB@ | |@LB@ 82 74@LB@@LB@@LB@Energy -11.63 kcal/mol@LB@Hybridization Energy -12.2648 kcal/mol@LB@Unfolding Energy - mRNA 0.311297 kcal/mol@LB@Unfolding Energy - sRNA 0.324493 kcal/mol@LB@@LB@Position - mRNA 288 -- 294@LB@Position - sRNA 75 -- 81@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 17 |
0.003067 |
0.5385 |
b1628 |
rsxB |
-11.62 |
0.055094 |
175 -- 198 |
58 -- 77 |
SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein |
|
_____________174______________________199\n_____________|________________________|\n5'-CAC...UUAUG_________G_____GUGA_____UAAUG...ACG-3'\n______________GGCUUUAGU_GUUUG____AGUUG\n______________|||||||||_:||:|____|||||\n______________CCGAAAUCA_UAAGC____UCAAC\n3'-CGC...UGCAA_________A______________UCUUU...AAG-5'\n_____________|________________________|\n_____________78_______________________57\n |
177 -- 183 |
69 -- 75 |
-20.3316 kcal/mol |
7.50919 kcal/mol |
1.19974 kcal/mol |
174 199@LB@ | |@LB@5'-CAC...UUAUG G GUGA UAAUG...ACG-3'@LB@ GGCUUUAGU GUUUG AGUUG@LB@ ||||||||| :||:| |||||@LB@ CCGAAAUCA UAAGC UCAAC@LB@3'-CGC...UGCAA A UCUUU...AAG-5'@LB@ | |@LB@ 78 57@LB@@LB@@LB@Energy -11.62 kcal/mol@LB@Hybridization Energy -20.3316 kcal/mol@LB@Unfolding Energy - mRNA 7.50919 kcal/mol@LB@Unfolding Energy - sRNA 1.19974 kcal/mol@LB@@LB@Position - mRNA 175 -- 198@LB@Position - sRNA 58 -- 77@LB@Position Seed - mRNA 177 -- 183@LB@Position Seed - sRNA 69 -- 75@LB@ |
| 3 |
0.0006202 |
0.5173 |
b3310 |
rplN |
-11.54 |
0.056896 |
6 -- 16 |
77 -- 87 |
50S ribosomal subunit protein L14 |
|
_____________5___________17\n_____________|___________|\n______5'-ACGCU___________UAGAG...CAG-3'\n______________GGUUCGCGUUG\n______________:||||:|||||\n______________UCAAGUGCAAC\n3'-CGC...CGUUU___________CGAAA...AAG-5'\n_____________|___________|\n_____________88__________76\n |
10 -- 16 |
77 -- 83 |
-15.9171 kcal/mol |
3.86869 kcal/mol |
0.505155 kcal/mol |
5 17@LB@ | |@LB@ 5'-ACGCU UAGAG...CAG-3'@LB@ GGUUCGCGUUG@LB@ :||||:|||||@LB@ UCAAGUGCAAC@LB@3'-CGC...CGUUU CGAAA...AAG-5'@LB@ | |@LB@ 88 76@LB@@LB@@LB@Energy -11.54 kcal/mol@LB@Hybridization Energy -15.9171 kcal/mol@LB@Unfolding Energy - mRNA 3.86869 kcal/mol@LB@Unfolding Energy - sRNA 0.505155 kcal/mol@LB@@LB@Position - mRNA 6 -- 16@LB@Position - sRNA 77 -- 87@LB@Position Seed - mRNA 10 -- 16@LB@Position Seed - sRNA 77 -- 83@LB@ |
| 20 |
0.003438 |
0.5385 |
b3093 |
exuT |
-11.51 |
0.057623 |
213 -- 228 |
75 -- 90 |
hexuronate transporter |
|
_____________212______________229\n_____________|________________|\n5'-GGA...AAAUU_____G__________AUAUG...CGC-3'\n______________AAAGG_UUACGUUGGU\n______________|||:|_|:|||||||:\n______________UUUUC_AGUGCAACCG\n3'-CGC...AGGCG_____A__________AAAUC...AAG-5'\n_____________|________________|\n_____________91_______________74\n |
222 -- 228 |
75 -- 81 |
-17.0017 kcal/mol |
4.97243 kcal/mol |
0.517251 kcal/mol |
212 229@LB@ | |@LB@5'-GGA...AAAUU G AUAUG...CGC-3'@LB@ AAAGG UUACGUUGGU@LB@ |||:| |:|||||||:@LB@ UUUUC AGUGCAACCG@LB@3'-CGC...AGGCG A AAAUC...AAG-5'@LB@ | |@LB@ 91 74@LB@@LB@@LB@Energy -11.51 kcal/mol@LB@Hybridization Energy -17.0017 kcal/mol@LB@Unfolding Energy - mRNA 4.97243 kcal/mol@LB@Unfolding Energy - sRNA 0.517251 kcal/mol@LB@@LB@Position - mRNA 213 -- 228@LB@Position - sRNA 75 -- 90@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 75 -- 81@LB@ |
