| 200 |
0.01028 |
0.1776 |
b2803 |
fucK |
-15.72 |
0.013449 |
16 -- 30 |
62 -- 76 |
L-fuculokinase |
|
_____________15______________31\n_____________|_______________|\n5'-AUC...UGCCU_______________UGGAU...CGC-3'\n______________GGGCUGCGCACGGCA\n______________:|:||:|:|||:|||\n______________UCUGAUGUGUGUCGU\n3'-UUU...CCGUU_______________UAAGC...GCA-5'\n_____________|_______________|\n_____________77______________61\n |
24 -- 30 |
62 -- 68 |
-24.6836 kcal/mol |
5.71098 kcal/mol |
3.25371 kcal/mol |
15 31@LB@ | |@LB@5'-AUC...UGCCU UGGAU...CGC-3'@LB@ GGGCUGCGCACGGCA@LB@ :|:||:|:|||:|||@LB@ UCUGAUGUGUGUCGU@LB@3'-UUU...CCGUU UAAGC...GCA-5'@LB@ | |@LB@ 77 61@LB@@LB@@LB@Energy -15.72 kcal/mol@LB@Hybridization Energy -24.6836 kcal/mol@LB@Unfolding Energy - mRNA 5.71098 kcal/mol@LB@Unfolding Energy - sRNA 3.25371 kcal/mol@LB@@LB@Position - mRNA 16 -- 30@LB@Position - sRNA 62 -- 76@LB@Position Seed - mRNA 24 -- 30@LB@Position Seed - sRNA 62 -- 68@LB@ |
| 193 |
0.0098 |
0.1776 |
b0757 |
galK |
-12.45 |
0.083592 |
134 -- 176 |
33 -- 76 |
galactokinase |
|
_____________133____________________________________________177\n_____________|______________________________________________|\n5'-CAU...ACCGC________G_______AG__U___CGCG__G____C____A_____UUUCG...GUG-3'\n______________AGA__ACA_GCAGCAG__CG_UUG____CA_UCAG__GAU_UCCAU\n______________|||__|||_:|||||:__||_|||____||_||||__|||_|||||\n______________UCU__UGU_UGUCGUU__GC_AAC____GU_AGUC__CUA_AGGUA\n3'-UUU...CCGUU___GA___G_______AA______AAA___G____CC___A_____CGAAU...GCA-5'\n_____________|______________________________________________|\n_____________77_____________________________________________32\n |
141 -- 147 |
61 -- 67 |
-31.8657 kcal/mol |
14.6029 kcal/mol |
4.81602 kcal/mol |
133 177@LB@ | |@LB@5'-CAU...ACCGC G AG U CGCG G C A UUUCG...GUG-3'@LB@ AGA ACA GCAGCAG CG UUG CA UCAG GAU UCCAU@LB@ ||| ||| :|||||: || ||| || |||| ||| |||||@LB@ UCU UGU UGUCGUU GC AAC GU AGUC CUA AGGUA@LB@3'-UUU...CCGUU GA G AA AAA G CC A CGAAU...GCA-5'@LB@ | |@LB@ 77 32@LB@@LB@@LB@Energy -12.45 kcal/mol@LB@Hybridization Energy -31.8657 kcal/mol@LB@Unfolding Energy - mRNA 14.6029 kcal/mol@LB@Unfolding Energy - sRNA 4.81602 kcal/mol@LB@@LB@Position - mRNA 134 -- 176@LB@Position - sRNA 33 -- 76@LB@Position Seed - mRNA 141 -- 147@LB@Position Seed - sRNA 61 -- 67@LB@ |
| 87 |
0.003844 |
0.1538 |
b3124 |
garK |
-12.12 |
0.097757 |
2 -- 34 |
58 -- 88 |
glycerate kinase I |
|
_____________1_________________________________35\n_____________|_________________________________|\n__________5'-U_______AU_____C______A____A______AGGAA...AUG-3'\n______________GGAGAUG__GCAGG_ACUGCG_GCAG_UGGUUU\n______________|||||||__|||::_|||:|:_:|||_:::||:\n______________CCUCUAC__CGUUU_UGAUGU_UGUC_GUUAAG\n3'-UUU...AGCAC_______C______C______G___________CAACA...GCA-5'\n_____________|_________________________________|\n_____________89________________________________57\n |
2 -- 8 |
82 -- 88 |
-28.4892 kcal/mol |
6.08629 kcal/mol |
10.2803 kcal/mol |
1 35@LB@ | |@LB@ 5'-U AU C A A AGGAA...AUG-3'@LB@ GGAGAUG GCAGG ACUGCG GCAG UGGUUU@LB@ ||||||| |||:: |||:|: :||| :::||:@LB@ CCUCUAC CGUUU UGAUGU UGUC GUUAAG@LB@3'-UUU...AGCAC C C G CAACA...GCA-5'@LB@ | |@LB@ 89 57@LB@@LB@@LB@Energy -12.12 kcal/mol@LB@Hybridization Energy -28.4892 kcal/mol@LB@Unfolding Energy - mRNA 6.08629 kcal/mol@LB@Unfolding Energy - sRNA 10.2803 kcal/mol@LB@@LB@Position - mRNA 2 -- 34@LB@Position - sRNA 58 -- 88@LB@Position Seed - mRNA 2 -- 8@LB@Position Seed - sRNA 82 -- 88@LB@ |
| 33 |
0.0005309 |
0.05552 |
b2905 |
gcvT |
-15.66 |
0.013961 |
227 -- 265 |
34 -- 74 |
aminomethyltransferase tetrahydrofolate-dependent subunit (T protein) of glycine cleavage complex |
|
_____________226___________________________________________266\n_____________|_____________________________________________|\n5'-CUG...UACGA__A_______________CG__________CAU__U_________CGGCU...AAA-3'\n______________AC_ACACAC_GC__UUUG__G___CGCUCG___GG_GGAUUUCCA\n______________||_||||||_||__||:|__|___|:|||:___||_|||||||||\n______________UG_UGUGUG_CG__AAGC__C___GUGAGU___CC_CCUAAAGGU\n3'-UUU...GUUUC__A______U__UU____AA_AAA_____________________ACGAA...GCA-5'\n_____________|_____________________________________________|\n_____________75____________________________________________33\n |
259 -- 265 |
34 -- 40 |
-32.8395 kcal/mol |
12.3643 kcal/mol |
4.81599 kcal/mol |
226 266@LB@ | |@LB@5'-CUG...UACGA A CG CAU U CGGCU...AAA-3'@LB@ AC ACACAC GC UUUG G CGCUCG GG GGAUUUCCA@LB@ || |||||| || ||:| | |:|||: || |||||||||@LB@ UG UGUGUG CG AAGC C GUGAGU CC CCUAAAGGU@LB@3'-UUU...GUUUC A U UU AA AAA ACGAA...GCA-5'@LB@ | |@LB@ 75 33@LB@@LB@@LB@Energy -15.66 kcal/mol@LB@Hybridization Energy -32.8395 kcal/mol@LB@Unfolding Energy - mRNA 12.3643 kcal/mol@LB@Unfolding Energy - sRNA 4.81599 kcal/mol@LB@@LB@Position - mRNA 227 -- 265@LB@Position - sRNA 34 -- 74@LB@Position Seed - mRNA 259 -- 265@LB@Position Seed - sRNA 34 -- 40@LB@ |
| 25 |
0.0002079 |
0.02926 |
b4064 |
ghxP |
-13.58 |
0.046769 |
115 -- 151 |
38 -- 73 |
guanine/hypoxanthine permease high affinity; guanine/hypoxanthine:H+ symporter |
|
_____________114____________________________________152\n_____________|______________________________________|\n5'-UCG...CAAAC___GA_____G__GAUAAC________GG_________GUCCG...UAA-3'\n______________CUG___GCAG_AA______GUUUCGCU__CAGGGGAUU\n______________||:___:|||_||______|||||:||__|||||||||\n______________GAU___UGUC_UU______CAAAGUGA__GUCCCCUAA\n3'-UUU...UUUCU___GUG____G__AAGCAA___________________AGGUA...GCA-5'\n_____________|______________________________________|\n_____________74_____________________________________37\n |
145 -- 151 |
38 -- 44 |
-32.2199 kcal/mol |
13.8672 kcal/mol |
4.77333 kcal/mol |
114 152@LB@ | |@LB@5'-UCG...CAAAC GA G GAUAAC GG GUCCG...UAA-3'@LB@ CUG GCAG AA GUUUCGCU CAGGGGAUU@LB@ ||: :||| || |||||:|| |||||||||@LB@ GAU UGUC UU CAAAGUGA GUCCCCUAA@LB@3'-UUU...UUUCU GUG G AAGCAA AGGUA...GCA-5'@LB@ | |@LB@ 74 37@LB@@LB@@LB@Energy -13.58 kcal/mol@LB@Hybridization Energy -32.2199 kcal/mol@LB@Unfolding Energy - mRNA 13.8672 kcal/mol@LB@Unfolding Energy - sRNA 4.77333 kcal/mol@LB@@LB@Position - mRNA 115 -- 151@LB@Position - sRNA 38 -- 73@LB@Position Seed - mRNA 145 -- 151@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 1 |
5.015e-10 |
1.765e-06 |
b0680 |
glnS |
-23.71 |
0.000006 |
155 -- 198 |
34 -- 77 |
glutamyl-tRNA synthetase |
|
_____________154___________________________________________199\n_____________|_____________________________________________|\n5'-UGC...CUUAU_____C______C__U__A________A_____U_A___A_____CGAUG...CGC-3'\n______________AAGAU_AUACGC_GU_AU_CGUUGUUU_CGCUU_G_GGA__UCCA\n______________||||:_|:||:|_|:_||_||||||||_|:||:_|_|||__||||\n______________UUCUG_UGUGUG_CG_UA_GCAACAAA_GUGAG_C_CCU__AGGU\n3'-UUU...CCCGU_____A______U__U__A______________U_C___AA____ACGAA...GCA-5'\n_____________|_____________________________________________|\n_____________78____________________________________________33\n |
175 -- 181 |
51 -- 57 |
-34.8912 kcal/mol |
6.37021 kcal/mol |
4.81601 kcal/mol |
154 199@LB@ | |@LB@5'-UGC...CUUAU C C U A A U A A CGAUG...CGC-3'@LB@ AAGAU AUACGC GU AU CGUUGUUU CGCUU G GGA UCCA@LB@ ||||: |:||:| |: || |||||||| |:||: | ||| ||||@LB@ UUCUG UGUGUG CG UA GCAACAAA GUGAG C CCU AGGU@LB@3'-UUU...CCCGU A U U A U C AA ACGAA...GCA-5'@LB@ | |@LB@ 78 33@LB@@LB@@LB@Energy -23.71 kcal/mol@LB@Hybridization Energy -34.8912 kcal/mol@LB@Unfolding Energy - mRNA 6.37021 kcal/mol@LB@Unfolding Energy - sRNA 4.81601 kcal/mol@LB@@LB@Position - mRNA 155 -- 198@LB@Position - sRNA 34 -- 77@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 49 |
0.00161 |
0.1153 |
b0655 |
gltI |
-14.54 |
0.027470 |
112 -- 169 |
31 -- 74 |
glutamate/aspartate periplasmic binding protein |
|
_____________111________________________________________________________170\n_____________|__________________________________________________________|\n5'-AUU...ACAAC_______AAUAAAGUU____A____AACAACACAAA______CAAC____A_______GUUCU...UGG-3'\n______________ACUGCAC_________GCAG_CGAU___________CACUCA____GGGU_UCCAUGC\n______________|||:|||_________:|||_|:||___________||||||____||:|_|||||||\n______________UGAUGUG_________UGUC_GUUA___________GUGAGU____CCUA_AGGUACG\n3'-UUU...GUUUC_________________________AGCAACAAA________CC______A_______AAUAU...GCA-5'\n_____________|__________________________________________________________|\n_____________75_________________________________________________________30\n |
163 -- 169 |
31 -- 37 |
-33.5884 kcal/mol |
11.7902 kcal/mol |
7.26183 kcal/mol |
111 170@LB@ | |@LB@5'-AUU...ACAAC AAUAAAGUU A AACAACACAAA CAAC A GUUCU...UGG-3'@LB@ ACUGCAC GCAG CGAU CACUCA GGGU UCCAUGC@LB@ |||:||| :||| |:|| |||||| ||:| |||||||@LB@ UGAUGUG UGUC GUUA GUGAGU CCUA AGGUACG@LB@3'-UUU...GUUUC AGCAACAAA CC A AAUAU...GCA-5'@LB@ | |@LB@ 75 30@LB@@LB@@LB@Energy -14.54 kcal/mol@LB@Hybridization Energy -33.5884 kcal/mol@LB@Unfolding Energy - mRNA 11.7902 kcal/mol@LB@Unfolding Energy - sRNA 7.26183 kcal/mol@LB@@LB@Position - mRNA 112 -- 169@LB@Position - sRNA 31 -- 74@LB@Position Seed - mRNA 163 -- 169@LB@Position Seed - sRNA 31 -- 37@LB@ |
| 134 |
0.006141 |
0.1605 |
b3413 |
gntX |
-10.72 |
0.183370 |
226 -- 267 |
37 -- 75 |
DNA catabolic protein |
|
_____________225__________________________________________268\n_____________|____________________________________________|\n5'-CCC...AUGCU___________AAU__CACUGG____AGG_______________GUUCG...AUA-3'\n______________GGCUAUGC_CG___GC______CGUU___UCAUU_GGGGGAUUU\n______________|:|||::|_|:___||______||||___|||:|_:||||||||\n______________CUGAUGUG_GU___CG______GCAA___AGUGA_UCCCCUAAA\n3'-UUU...CGUUU________U_______UUAA______CAA_____G_________GGUAC...GCA-5'\n_____________|____________________________________________|\n_____________76___________________________________________36\n |
261 -- 267 |
37 -- 43 |
-30.3916 kcal/mol |
14.8943 kcal/mol |
4.77966 kcal/mol |
225 268@LB@ | |@LB@5'-CCC...AUGCU AAU CACUGG AGG GUUCG...AUA-3'@LB@ GGCUAUGC CG GC CGUU UCAUU GGGGGAUUU@LB@ |:|||::| |: || |||| |||:| :||||||||@LB@ CUGAUGUG GU CG GCAA AGUGA UCCCCUAAA@LB@3'-UUU...CGUUU U UUAA CAA G GGUAC...GCA-5'@LB@ | |@LB@ 76 36@LB@@LB@@LB@Energy -10.72 kcal/mol@LB@Hybridization Energy -30.3916 kcal/mol@LB@Unfolding Energy - mRNA 14.8943 kcal/mol@LB@Unfolding Energy - sRNA 4.77966 kcal/mol@LB@@LB@Position - mRNA 226 -- 267@LB@Position - sRNA 37 -- 75@LB@Position Seed - mRNA 261 -- 267@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 68 |
0.002787 |
0.1417 |
b3001 |
gpr |
-15.31 |
0.017381 |
36 -- 59 |
44 -- 69 |
L-glyceraldehyde 3-phosphate reductase |
|
_____________35__________________________60\n_____________|___________________________|\n5'-UCC...GUUAA________________CAC________UUGGU...GGC-3'\n______________ACGCGGCA__UCGUUG___UC_CUCAG\n______________||:|:|||__||||||___||_|||||\n______________UGUGUCGU__AGCAAC___AG_GAGUC\n3'-UUU...UGAUG________UA______AA___U_____CCCUA...GCA-5'\n_____________|___________________________|\n_____________70__________________________43\n |
37 -- 43 |
62 -- 68 |
-25.5933 kcal/mol |
6.1914 kcal/mol |
4.09554 kcal/mol |
35 60@LB@ | |@LB@5'-UCC...GUUAA CAC UUGGU...GGC-3'@LB@ ACGCGGCA UCGUUG UC CUCAG@LB@ ||:|:||| |||||| || |||||@LB@ UGUGUCGU AGCAAC AG GAGUC@LB@3'-UUU...UGAUG UA AA U CCCUA...GCA-5'@LB@ | |@LB@ 70 43@LB@@LB@@LB@Energy -15.31 kcal/mol@LB@Hybridization Energy -25.5933 kcal/mol@LB@Unfolding Energy - mRNA 6.1914 kcal/mol@LB@Unfolding Energy - sRNA 4.09554 kcal/mol@LB@@LB@Position - mRNA 36 -- 59@LB@Position - sRNA 44 -- 69@LB@Position Seed - mRNA 37 -- 43@LB@Position Seed - sRNA 62 -- 68@LB@ |
| 59 |
0.002304 |
0.1363 |
b2508 |
guaB |
-11.36 |
0.139274 |
1 -- 26 |
38 -- 71 |
IMP dehydrogenase |
|
______________1__________________________________27\n______________|__________________________________|\n___________5'-__UA_______AA____________G_________GAGAA...AGC-3'\n______________AC__ACGGUAA___________AUU_CAGGGGAUU\n______________||__||:|:||___________|:|_|||||||||\n______________UG__UGUCGUU___________UGA_GUCCCCUAA\n3'-UUU...UCUGA__UG_______AAGCAACAAAG_____________AGGUA...GCA-5'\n_____________|___________________________________|\n_____________72__________________________________37\n |
20 -- 26 |
38 -- 44 |
-21.1303 kcal/mol |
5.02575 kcal/mol |
4.74986 kcal/mol |
1 27@LB@ | |@LB@ 5'- UA AA G GAGAA...AGC-3'@LB@ AC ACGGUAA AUU CAGGGGAUU@LB@ || ||:|:|| |:| |||||||||@LB@ UG UGUCGUU UGA GUCCCCUAA@LB@3'-UUU...UCUGA UG AAGCAACAAAG AGGUA...GCA-5'@LB@ | |@LB@ 72 37@LB@@LB@@LB@Energy -11.36 kcal/mol@LB@Hybridization Energy -21.1303 kcal/mol@LB@Unfolding Energy - mRNA 5.02575 kcal/mol@LB@Unfolding Energy - sRNA 4.74986 kcal/mol@LB@@LB@Position - mRNA 1 -- 26@LB@Position - sRNA 38 -- 71@LB@Position Seed - mRNA 20 -- 26@LB@Position Seed - sRNA 38 -- 44@LB@ |
